RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 CPSF1Q10570 1443 aaKnown RBP20.92■□□□□ 0.94
SNX6-202ENST00000396526 KNDC1Q76NI1 1749 aa20.92■□□□□ 0.94
SNX6-202ENST00000396526 PHF23Q9BUL5 403 aaPredicted RBP20.92■□□□□ 0.94
SNX6-202ENST00000396526 AMOTL2Q9Y2J4 779 aa20.92■□□□□ 0.94
SNX6-202ENST00000396526 ROBO2Q9HCK4 1378 aa20.92■□□□□ 0.94
SNX6-202ENST00000396526 FCHSD2O94868 740 aa20.92■□□□□ 0.94
SNX6-202ENST00000396526 SHPRHQ149N8 1683 aa20.92■□□□□ 0.94
SNX6-202ENST00000396526 POLKQ9UBT6 870 aa20.9■□□□□ 0.94
SNX6-202ENST00000396526 PNPLA6Q8IY17 1366 aa20.9■□□□□ 0.94
SNX6-202ENST00000396526 TMPOP42166 694 aaKnown RBP20.89■□□□□ 0.94
SNX6-202ENST00000396526 ANKRD26Q9UPS8 1709 aa20.89■□□□□ 0.93
SNX6-202ENST00000396526 NME9Q86XW9 330 aa20.89■□□□□ 0.93
SNX6-202ENST00000396526 SLIT1O75093 1534 aa20.88■□□□□ 0.93
SNX6-202ENST00000396526 TCERG1O14776 1098 aaKnown RBP20.88■□□□□ 0.93
SNX6-202ENST00000396526 PDE3AQ14432 1141 aa20.88■□□□□ 0.93
SNX6-202ENST00000396526 DMRT2Q9Y5R5 561 aa20.88■□□□□ 0.93
SNX6-202ENST00000396526 CT47B1P0C2W7 299 aaPredicted RBP20.88■□□□□ 0.93
SNX6-202ENST00000396526 IQSEC2Q5JU85 1478 aa20.87■□□□□ 0.93
SNX6-202ENST00000396526 ARHGAP23Q9P227 1491 aa20.87■□□□□ 0.93
SNX6-202ENST00000396526 FER1L4A9Z1Z3 1794 aa20.87■□□□□ 0.93
SNX6-202ENST00000396526 C3P01024 1663 aa20.87■□□□□ 0.93
SNX6-202ENST00000396526 PLEKHG3A1L390 1219 aa20.86■□□□□ 0.93
SNX6-202ENST00000396526 C20orf194Q5TEA3 1177 aa20.86■□□□□ 0.93
SNX6-202ENST00000396526 BCAR3O75815 825 aa20.86■□□□□ 0.93
SNX6-202ENST00000396526 RIPK4P57078 832 aa20.86■□□□□ 0.93
SNX6-202ENST00000396526 AATKQ6ZMQ8 1374 aa20.86■□□□□ 0.93
SNX6-202ENST00000396526 PLEKHF1Q96S99 279 aa20.85■□□□□ 0.93
SNX6-202ENST00000396526 KIF20BQ96Q89 1820 aa20.85■□□□□ 0.93
SNX6-202ENST00000396526 CDC42BPGQ6DT37 1551 aa20.84■□□□□ 0.93
SNX6-202ENST00000396526 CALD1Q05682 793 aaKnown RBP20.84■□□□□ 0.93
SNX6-202ENST00000396526 IL16Q14005 1332 aa20.84■□□□□ 0.93
SNX6-202ENST00000396526 NUTM2FA1L443 756 aa20.83■□□□□ 0.93
SNX6-202ENST00000396526 CENPQQ7L2Z9 268 aaPredicted RBP20.83■□□□□ 0.93
SNX6-202ENST00000396526 ACEP12821 1306 aa20.83■□□□□ 0.93
SNX6-202ENST00000396526 PRR36Q9H6K5 1346 aa20.83■□□□□ 0.93
SNX6-202ENST00000396526 FANCIQ9NVI1 1328 aa20.83■□□□□ 0.93
SNX6-202ENST00000396526 COL3A1P02461 1466 aaPredicted RBP20.83■□□□□ 0.93
SNX6-202ENST00000396526 MS4A1P11836 297 aa20.83■□□□□ 0.93
SNX6-202ENST00000396526 NCKAP5LQ9HCH0 1330 aa20.83■□□□□ 0.93
SNX6-202ENST00000396526 ANKLE2Q86XL3 938 aa20.82■□□□□ 0.92
SNX6-202ENST00000396526 FRAT1Q92837 279 aaPredicted RBP20.82■□□□□ 0.92
SNX6-202ENST00000396526 AAMPQ13685 434 aa20.82■□□□□ 0.92
SNX6-202ENST00000396526 TTC21BQ7Z4L5 1316 aa20.82■□□□□ 0.92
SNX6-202ENST00000396526 PRKAR2BP31323 418 aa20.81■□□□□ 0.92
SNX6-202ENST00000396526 RARSP54136 660 aaKnown RBP20.81■□□□□ 0.92
SNX6-202ENST00000396526 NGDNQ8NEJ9 315 aaKnown RBP20.81■□□□□ 0.92
SNX6-202ENST00000396526 EMILIN1Q9Y6C2 1016 aa20.81■□□□□ 0.92
SNX6-202ENST00000396526 PIK3R4Q99570 1358 aa20.8■□□□□ 0.92
SNX6-202ENST00000396526 PTCH1Q13635 1447 aa20.8■□□□□ 0.92
SNX6-202ENST00000396526 DIP2AQ14689 1571 aa20.79■□□□□ 0.92
SNX6-202ENST00000396526 LMOD3Q0VAK6 560 aa20.79■□□□□ 0.92
SNX6-202ENST00000396526 ADGRB2O60241 1585 aa20.78■□□□□ 0.92
SNX6-202ENST00000396526 FBLN1P23142 703 aa20.78■□□□□ 0.92
SNX6-202ENST00000396526 PTPRUQ92729 1446 aa20.78■□□□□ 0.92
SNX6-202ENST00000396526 RSPH6AQ9H0K4 717 aa20.77■□□□□ 0.92
SNX6-202ENST00000396526 ZRANB1Q9UGI0 708 aa20.77■□□□□ 0.92
SNX6-202ENST00000396526 TTC21AQ8NDW8 1320 aa20.77■□□□□ 0.92
SNX6-202ENST00000396526 TRIM35Q9UPQ4 493 aa20.77■□□□□ 0.91
SNX6-202ENST00000396526 CDK12Q9NYV4 1490 aaPredicted RBP20.77■□□□□ 0.91
SNX6-202ENST00000396526 IL13P35225 146 aa20.76■□□□□ 0.91
SNX6-202ENST00000396526 NFE2L2Q16236 605 aa20.76■□□□□ 0.91
SNX6-202ENST00000396526 HMOX1P09601 288 aa20.76■□□□□ 0.91
SNX6-202ENST00000396526 RRS1Q15050 365 aaKnown RBP20.76■□□□□ 0.91
SNX6-202ENST00000396526 ERICH6Q7L0X2 663 aa20.74■□□□□ 0.91
SNX6-202ENST00000396526 ANP32AP39687 249 aaKnown RBP20.74■□□□□ 0.91
SNX6-202ENST00000396526 ITSN1Q15811 1721 aa20.74■□□□□ 0.91
SNX6-202ENST00000396526 USP6P35125 1406 aa20.73■□□□□ 0.91
SNX6-202ENST00000396526 EXOSC9Q06265 439 aaKnown RBP20.73■□□□□ 0.91
SNX6-202ENST00000396526 PMFBP1Q8TBY8 1022 aa20.73■□□□□ 0.91
SNX6-202ENST00000396526 ZKSCAN2Q63HK3 967 aa20.73■□□□□ 0.91
SNX6-202ENST00000396526 FTSJ3Q8IY81 847 aaKnown RBP20.72■□□□□ 0.91
SNX6-202ENST00000396526 TSR2Q969E8 191 aaKnown RBP20.72■□□□□ 0.91
SNX6-202ENST00000396526 SMC4Q9NTJ3 1288 aa20.72■□□□□ 0.91
SNX6-202ENST00000396526 COG6Q9Y2V7 657 aa20.72■□□□□ 0.91
SNX6-202ENST00000396526 KCNA6P17658 529 aa20.72■□□□□ 0.91
SNX6-202ENST00000396526 MON2Q7Z3U7 1717 aa20.72■□□□□ 0.91
SNX6-202ENST00000396526 CEP170BQ9Y4F5 1589 aaPredicted RBP20.71■□□□□ 0.91
SNX6-202ENST00000396526 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.71■□□□□ 0.91
SNX6-202ENST00000396526 CLUAP1Q96AJ1 413 aa20.71■□□□□ 0.91
SNX6-202ENST00000396526 ZNF428Q96B54 188 aa20.71■□□□□ 0.91
SNX6-202ENST00000396526 IPO8O15397 1037 aaKnown RBP20.71■□□□□ 0.91
SNX6-202ENST00000396526 PANK1Q8TE04 598 aa20.71■□□□□ 0.91
SNX6-202ENST00000396526 MAP2P11137 1827 aaKnown RBP20.71■□□□□ 0.91
SNX6-202ENST00000396526 BCL2L13Q9BXK5 485 aa20.7■□□□□ 0.9
SNX6-202ENST00000396526 GNAI1P63096 354 aa20.7■□□□□ 0.9
SNX6-202ENST00000396526 LAS1LQ9Y4W2 734 aaKnown RBP20.69■□□□□ 0.9
SNX6-202ENST00000396526 KDM2BQ8NHM5 1336 aa20.69■□□□□ 0.9
SNX6-202ENST00000396526 AKAP12Q02952 1782 aa20.69■□□□□ 0.9
SNX6-202ENST00000396526 ANKARQ7Z5J8 1434 aa20.68■□□□□ 0.9
SNX6-202ENST00000396526 DZIP1LQ8IYY4 767 aaKnown RBP20.67■□□□□ 0.9
SNX6-202ENST00000396526 PDE4AP27815 886 aa20.66■□□□□ 0.9
SNX6-202ENST00000396526 PHACTR3Q96KR7 559 aa20.66■□□□□ 0.9
SNX6-202ENST00000396526 LRRC7Q96NW7 1537 aa20.66■□□□□ 0.9
SNX6-202ENST00000396526 KIF16BQ96L93 1317 aa20.66■□□□□ 0.9
SNX6-202ENST00000396526 SOX12O15370 315 aa20.65■□□□□ 0.9
SNX6-202ENST00000396526 RIMS1Q86UR5 1692 aaKnown RBP20.65■□□□□ 0.9
SNX6-202ENST00000396526 OVOS2A0A0J9YW53 1432 aa20.65■□□□□ 0.9
SNX6-202ENST00000396526 OVOS2Q6IE36 1432 aa20.65■□□□□ 0.9
SNX6-202ENST00000396526 AMPHP49418 695 aa20.65■□□□□ 0.9
SNX6-202ENST00000396526 IFT57Q9NWB7 429 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms