RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 VIRMAQ69YN4 1812 aaKnown RBP17.9■□□□□ 0.46
CLIP2-203ENST00000395060 TMPOP42166 694 aaKnown RBP17.89■□□□□ 0.46
CLIP2-203ENST00000395060 RBM10P98175 930 aaKnown RBP17.89■□□□□ 0.45
CLIP2-203ENST00000395060 CHAMP1Q96JM3 812 aa17.89■□□□□ 0.45
CLIP2-203ENST00000395060 GBP4Q96PP9 640 aa17.89■□□□□ 0.45
CLIP2-203ENST00000395060 KIDINS220Q9ULH0 1771 aa17.89■□□□□ 0.45
CLIP2-203ENST00000395060 NPATQ14207 1427 aa17.88■□□□□ 0.45
CLIP2-203ENST00000395060 SRPK2P78362 688 aaKnown RBP17.88■□□□□ 0.45
CLIP2-203ENST00000395060 PHF23Q9BUL5 403 aaPredicted RBP17.88■□□□□ 0.45
CLIP2-203ENST00000395060 CHD1LQ86WJ1 897 aa17.88■□□□□ 0.45
CLIP2-203ENST00000395060 DDX49Q9Y6V7 483 aaKnown RBP17.88■□□□□ 0.45
CLIP2-203ENST00000395060 TPRNQ4KMQ1 711 aa17.87■□□□□ 0.45
CLIP2-203ENST00000395060 TRIM35Q9UPQ4 493 aa17.87■□□□□ 0.45
CLIP2-203ENST00000395060 GAS2L2Q8NHY3 880 aa17.87■□□□□ 0.45
CLIP2-203ENST00000395060 DEPDC5O75140 1603 aa17.87■□□□□ 0.45
CLIP2-203ENST00000395060 MROH1Q8NDA8 1641 aa17.87■□□□□ 0.45
CLIP2-203ENST00000395060 CEP152O94986 1710 aa17.86■□□□□ 0.45
CLIP2-203ENST00000395060 HDAC1Q13547 482 aaPredicted RBP17.86■□□□□ 0.45
CLIP2-203ENST00000395060 SMC5Q8IY18 1101 aa17.86■□□□□ 0.45
CLIP2-203ENST00000395060 ZBTB40Q9NUA8 1239 aa17.86■□□□□ 0.45
CLIP2-203ENST00000395060 POGZQ7Z3K3 1410 aa17.85■□□□□ 0.45
CLIP2-203ENST00000395060 IDI1Q13907 227 aa17.85■□□□□ 0.45
CLIP2-203ENST00000395060 MCTP1Q6DN14 999 aa17.85■□□□□ 0.45
CLIP2-203ENST00000395060 VWDEQ8N2E2 1590 aa17.85■□□□□ 0.45
CLIP2-203ENST00000395060 HMOX1P09601 288 aa17.84■□□□□ 0.45
CLIP2-203ENST00000395060 NASPP49321 788 aaPredicted RBP17.84■□□□□ 0.45
CLIP2-203ENST00000395060 AAMPQ13685 434 aa17.84■□□□□ 0.45
CLIP2-203ENST00000395060 KIAA1211Q6ZU35 1233 aa17.84■□□□□ 0.45
CLIP2-203ENST00000395060 NUCB1Q02818 461 aa17.84■□□□□ 0.45
CLIP2-203ENST00000395060 TBC1D9Q6ZT07 1266 aa17.84■□□□□ 0.45
CLIP2-203ENST00000395060 PPRC1Q5VV67 1664 aaKnown RBP17.84■□□□□ 0.45
CLIP2-203ENST00000395060 MLECQ14165 292 aa17.83■□□□□ 0.45
CLIP2-203ENST00000395060 C14orf93Q9H972 538 aaKnown RBP17.83■□□□□ 0.45
CLIP2-203ENST00000395060 EFCAB6Q5THR3 1501 aa17.83■□□□□ 0.45
CLIP2-203ENST00000395060 ATAD2Q6PL18 1390 aa17.83■□□□□ 0.44
CLIP2-203ENST00000395060 FBXO31Q5XUX0 539 aaPredicted RBP17.83■□□□□ 0.44
CLIP2-203ENST00000395060 CAVIN1Q6NZI2 390 aaKnown RBP17.83■□□□□ 0.44
CLIP2-203ENST00000395060 KIF2CQ99661 725 aa17.83■□□□□ 0.44
CLIP2-203ENST00000395060 PKP1Q13835 747 aa17.82■□□□□ 0.44
CLIP2-203ENST00000395060 RAB3GAP1Q15042 981 aa17.82■□□□□ 0.44
CLIP2-203ENST00000395060 FAM69CQ0P6D2 419 aa17.82■□□□□ 0.44
CLIP2-203ENST00000395060 CCDC27Q2M243 656 aa17.81■□□□□ 0.44
CLIP2-203ENST00000395060 MINK1Q8N4C8 1332 aaPredicted RBP17.81■□□□□ 0.44
CLIP2-203ENST00000395060 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.81■□□□□ 0.44
CLIP2-203ENST00000395060 K7ELQ4 463 aaPredicted RBP17.81■□□□□ 0.44
CLIP2-203ENST00000395060 RRP9O43818 475 aaKnown RBP17.81■□□□□ 0.44
CLIP2-203ENST00000395060 TSPYL6Q8N831 410 aa17.81■□□□□ 0.44
CLIP2-203ENST00000395060 ANP32BQ92688 251 aaKnown RBP17.81■□□□□ 0.44
CLIP2-203ENST00000395060 IQSEC2Q5JU85 1478 aa17.8■□□□□ 0.44
CLIP2-203ENST00000395060 ABCA6Q8N139 1617 aa17.8■□□□□ 0.44
CLIP2-203ENST00000395060 RBM25P49756 843 aaKnown RBP17.8■□□□□ 0.44
CLIP2-203ENST00000395060 FOXD4L6Q3SYB3 417 aaPredicted RBP17.8■□□□□ 0.44
CLIP2-203ENST00000395060 FOXD4L3Q6VB84 417 aaPredicted RBP17.8■□□□□ 0.44
CLIP2-203ENST00000395060 MPNDQ8N594 471 aa17.8■□□□□ 0.44
CLIP2-203ENST00000395060 MAP3K4Q9Y6R4 1608 aa17.8■□□□□ 0.44
CLIP2-203ENST00000395060 C16orf71Q8IYS4 520 aaPredicted RBP17.79■□□□□ 0.44
CLIP2-203ENST00000395060 STAG3Q9UJ98 1225 aa17.79■□□□□ 0.44
CLIP2-203ENST00000395060 IPO8O15397 1037 aaKnown RBP17.79■□□□□ 0.44
CLIP2-203ENST00000395060 SLC24A1O60721 1099 aa17.79■□□□□ 0.44
CLIP2-203ENST00000395060 RBM27Q9P2N5 1060 aaKnown RBP17.79■□□□□ 0.44
CLIP2-203ENST00000395060 DDIT3P35638 169 aa17.78■□□□□ 0.44
CLIP2-203ENST00000395060 YEATS2Q9ULM3 1422 aa17.78■□□□□ 0.44
CLIP2-203ENST00000395060 GOLGA6L22H0YM25 854 aa17.78■□□□□ 0.44
CLIP2-203ENST00000395060 VGFO15240 615 aaPredicted RBP17.78■□□□□ 0.44
CLIP2-203ENST00000395060 MSNP26038 577 aaKnown RBP17.78■□□□□ 0.44
CLIP2-203ENST00000395060 FAM13BQ9NYF5 915 aa17.78■□□□□ 0.44
CLIP2-203ENST00000395060 MROH2AA6NES4 1674 aa17.78■□□□□ 0.44
CLIP2-203ENST00000395060 PLEKHF1Q96S99 279 aa17.78■□□□□ 0.44
CLIP2-203ENST00000395060 R3HCC1Q9Y3T6 440 aaKnown RBP17.78■□□□□ 0.44
CLIP2-203ENST00000395060 KIF1BO60333 1816 aa17.78■□□□□ 0.44
CLIP2-203ENST00000395060 NOL8Q76FK4 1167 aaKnown RBP17.77■□□□□ 0.44
CLIP2-203ENST00000395060 FRMPD1Q5SYB0 1578 aa17.77■□□□□ 0.43
CLIP2-203ENST00000395060 SHPRHQ149N8 1683 aa17.76■□□□□ 0.43
CLIP2-203ENST00000395060 BAG4O95429 457 aaKnown RBP17.76■□□□□ 0.43
CLIP2-203ENST00000395060 PRKAR2BP31323 418 aa17.76■□□□□ 0.43
CLIP2-203ENST00000395060 EVC2Q86UK5 1308 aa17.76■□□□□ 0.43
CLIP2-203ENST00000395060 MLH3Q9UHC1 1453 aa17.76■□□□□ 0.43
CLIP2-203ENST00000395060 SNX21Q969T3 373 aa17.76■□□□□ 0.43
CLIP2-203ENST00000395060 XPCQ01831 940 aaPredicted RBP17.76■□□□□ 0.43
CLIP2-203ENST00000395060 MYOM2P54296 1465 aa17.75■□□□□ 0.43
CLIP2-203ENST00000395060 RNF214Q8ND24 703 aa17.75■□□□□ 0.43
CLIP2-203ENST00000395060 OTUD7AQ8TE49 926 aaPredicted RBP17.75■□□□□ 0.43
CLIP2-203ENST00000395060 KIF16BQ96L93 1317 aa17.75■□□□□ 0.43
CLIP2-203ENST00000395060 DIAPH1O60610 1272 aaKnown RBP17.74■□□□□ 0.43
CLIP2-203ENST00000395060 BMP2KLQ5H9B9 411 aa17.74■□□□□ 0.43
CLIP2-203ENST00000395060 AK9Q5TCS8 1911 aa17.74■□□□□ 0.43
CLIP2-203ENST00000395060 PRPF40AO75400 957 aaKnown RBP17.74■□□□□ 0.43
CLIP2-203ENST00000395060 SIRT2Q8IXJ6 389 aa17.74■□□□□ 0.43
CLIP2-203ENST00000395060 ZGPATQ8N5A5 531 aaKnown RBP17.74■□□□□ 0.43
CLIP2-203ENST00000395060 PHACTR3Q96KR7 559 aa17.74■□□□□ 0.43
CLIP2-203ENST00000395060 SMARCA5O60264 1052 aaPredicted RBP17.73■□□□□ 0.43
CLIP2-203ENST00000395060 SKOR2Q2VWA4 1001 aaPredicted RBP17.73■□□□□ 0.43
CLIP2-203ENST00000395060 CALD1Q05682 793 aaKnown RBP17.73■□□□□ 0.43
CLIP2-203ENST00000395060 DCTN1Q14203 1278 aa17.73■□□□□ 0.43
CLIP2-203ENST00000395060 HECW2Q9P2P5 1572 aa17.72■□□□□ 0.43
CLIP2-203ENST00000395060 ZBTB7BO15156 539 aaPredicted RBP17.72■□□□□ 0.43
CLIP2-203ENST00000395060 FYB1O15117 783 aa17.72■□□□□ 0.43
CLIP2-203ENST00000395060 PPIP5K1Q6PFW1 1433 aa17.71■□□□□ 0.43
CLIP2-203ENST00000395060 GSPT1P15170 499 aaKnown RBP17.71■□□□□ 0.43
CLIP2-203ENST00000395060 CIZ1Q9ULV3 898 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms