RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 RLBP1P12271 317 aa20.2■□□□□ 0.82
SMARCD1-202ENST00000394963 HSPA2P54652 639 aa20.2■□□□□ 0.82
SMARCD1-202ENST00000394963 EIF2S2P20042 333 aaKnown RBP20.2■□□□□ 0.82
SMARCD1-202ENST00000394963 KRT24Q2M2I5 525 aa20.2■□□□□ 0.82
SMARCD1-202ENST00000394963 ARAP3Q8WWN8 1544 aa20.19■□□□□ 0.82
SMARCD1-202ENST00000394963 INO80Q9ULG1 1556 aaPredicted RBP20.19■□□□□ 0.82
SMARCD1-202ENST00000394963 IPO8O15397 1037 aaKnown RBP20.19■□□□□ 0.82
SMARCD1-202ENST00000394963 FANCIQ9NVI1 1328 aa20.19■□□□□ 0.82
SMARCD1-202ENST00000394963 KIF1BO60333 1816 aa20.19■□□□□ 0.82
SMARCD1-202ENST00000394963 PPIP5K1Q6PFW1 1433 aa20.19■□□□□ 0.82
SMARCD1-202ENST00000394963 ANKLE2Q86XL3 938 aa20.18■□□□□ 0.82
SMARCD1-202ENST00000394963 IGHDP01880 384 aa20.18■□□□□ 0.82
SMARCD1-202ENST00000394963 PROSER2Q86WR7 435 aaPredicted RBP20.18■□□□□ 0.82
SMARCD1-202ENST00000394963 RWDD1Q9H446 243 aaPredicted RBP20.18■□□□□ 0.82
SMARCD1-202ENST00000394963 LNPKQ9C0E8 428 aa20.17■□□□□ 0.82
SMARCD1-202ENST00000394963 MADDQ8WXG6 1647 aa20.17■□□□□ 0.82
SMARCD1-202ENST00000394963 SLKQ9H2G2 1235 aaPredicted RBP20.16■□□□□ 0.82
SMARCD1-202ENST00000394963 MFAP1P55081 439 aaKnown RBP20.16■□□□□ 0.82
SMARCD1-202ENST00000394963 ABCA6Q8N139 1617 aa20.16■□□□□ 0.82
SMARCD1-202ENST00000394963 IPO9Q96P70 1041 aaKnown RBP20.16■□□□□ 0.82
SMARCD1-202ENST00000394963 ZC3H6P61129 1189 aaKnown RBP20.15■□□□□ 0.82
SMARCD1-202ENST00000394963 ZNF692Q9BU19 519 aaPredicted RBP20.15■□□□□ 0.82
SMARCD1-202ENST00000394963 HSP90AA1P07900 732 aaKnown RBP20.14■□□□□ 0.82
SMARCD1-202ENST00000394963 WDR63Q8IWG1 891 aa20.14■□□□□ 0.82
SMARCD1-202ENST00000394963 TWISTNBQ3B726 338 aaPredicted RBP20.14■□□□□ 0.81
SMARCD1-202ENST00000394963 ANKRD45Q5TZF3 282 aa20.14■□□□□ 0.81
SMARCD1-202ENST00000394963 PPP6R1Q9UPN7 881 aa20.14■□□□□ 0.81
SMARCD1-202ENST00000394963 FCHSD2O94868 740 aa20.13■□□□□ 0.81
SMARCD1-202ENST00000394963 TSPYL6Q8N831 410 aa20.13■□□□□ 0.81
SMARCD1-202ENST00000394963 TSPYL4Q9UJ04 414 aa20.13■□□□□ 0.81
SMARCD1-202ENST00000394963 MAP3K4Q9Y6R4 1608 aa20.13■□□□□ 0.81
SMARCD1-202ENST00000394963 TMEM57Q8N5G2 664 aa20.13■□□□□ 0.81
SMARCD1-202ENST00000394963 NGEFQ8N5V2 710 aa20.13■□□□□ 0.81
SMARCD1-202ENST00000394963 NKTRP30414 1462 aaKnown RBP20.12■□□□□ 0.81
SMARCD1-202ENST00000394963 POLR3AO14802 1390 aaPredicted RBP20.12■□□□□ 0.81
SMARCD1-202ENST00000394963 ZNF330Q9Y3S2 320 aaPredicted RBP20.11■□□□□ 0.81
SMARCD1-202ENST00000394963 NFE2L2Q16236 605 aa20.11■□□□□ 0.81
SMARCD1-202ENST00000394963 CALD1Q05682 793 aaKnown RBP20.1■□□□□ 0.81
SMARCD1-202ENST00000394963 USP35Q9P2H5 1018 aa20.1■□□□□ 0.81
SMARCD1-202ENST00000394963 TTC21BQ7Z4L5 1316 aa20.1■□□□□ 0.81
SMARCD1-202ENST00000394963 MYOM2P54296 1465 aa20.1■□□□□ 0.81
SMARCD1-202ENST00000394963 MS4A1P11836 297 aa20.09■□□□□ 0.81
SMARCD1-202ENST00000394963 GNAI1P63096 354 aa20.09■□□□□ 0.81
SMARCD1-202ENST00000394963 PCDHB15Q9Y5E8 787 aa20.09■□□□□ 0.81
SMARCD1-202ENST00000394963 TRIM27P14373 513 aa20.09■□□□□ 0.81
SMARCD1-202ENST00000394963 PDZRN3Q9UPQ7 1066 aa20.09■□□□□ 0.81
SMARCD1-202ENST00000394963 DIP2CQ9Y2E4 1556 aa20.09■□□□□ 0.81
SMARCD1-202ENST00000394963 FRMPD1Q5SYB0 1578 aa20.08■□□□□ 0.81
SMARCD1-202ENST00000394963 ATF7IPQ6VMQ6 1270 aa20.08■□□□□ 0.81
SMARCD1-202ENST00000394963 DDX17Q92841 729 aaKnown RBP20.08■□□□□ 0.81
SMARCD1-202ENST00000394963 FAM161AQ3B820 660 aa20.08■□□□□ 0.8
SMARCD1-202ENST00000394963 PRR36Q9H6K5 1346 aa20.07■□□□□ 0.8
SMARCD1-202ENST00000394963 LMOD3Q0VAK6 560 aa20.07■□□□□ 0.8
SMARCD1-202ENST00000394963 EIF4A2Q14240 407 aaKnown RBP20.07■□□□□ 0.8
SMARCD1-202ENST00000394963 TRIM35Q9UPQ4 493 aa20.07■□□□□ 0.8
SMARCD1-202ENST00000394963 KDM5AP29375 1690 aaKnown RBP20.07■□□□□ 0.8
SMARCD1-202ENST00000394963 STK31Q9BXU1 1019 aa20.06■□□□□ 0.8
SMARCD1-202ENST00000394963 BACH2Q9BYV9 841 aa20.06■□□□□ 0.8
SMARCD1-202ENST00000394963 PDE3AQ14432 1141 aa20.06■□□□□ 0.8
SMARCD1-202ENST00000394963 TMEM2Q9UHN6 1383 aa20.06■□□□□ 0.8
SMARCD1-202ENST00000394963 ROBO2Q9HCK4 1378 aa20.06■□□□□ 0.8
SMARCD1-202ENST00000394963 CFAP74Q9C0B2 1584 aa20.05■□□□□ 0.8
SMARCD1-202ENST00000394963 BLMP54132 1417 aaPredicted RBP20.05■□□□□ 0.8
SMARCD1-202ENST00000394963 NLRP2Q9NX02 1062 aa20.05■□□□□ 0.8
SMARCD1-202ENST00000394963 SLC4A2P04920 1241 aa20.05■□□□□ 0.8
SMARCD1-202ENST00000394963 MBIPQ9NS73 344 aa20.05■□□□□ 0.8
SMARCD1-202ENST00000394963 FOXD4L1Q9NU39 408 aa20.05■□□□□ 0.8
SMARCD1-202ENST00000394963 DDX19BQ9UMR2 479 aa20.05■□□□□ 0.8
SMARCD1-202ENST00000394963 RNF123Q5XPI4 1314 aa20.04■□□□□ 0.8
SMARCD1-202ENST00000394963 FKBP5Q13451 457 aaPredicted RBP20.04■□□□□ 0.8
SMARCD1-202ENST00000394963 MVPQ14764 893 aaKnown RBP20.04■□□□□ 0.8
SMARCD1-202ENST00000394963 C8orf58Q8NAV2 365 aa20.04■□□□□ 0.8
SMARCD1-202ENST00000394963 PHF8Q9UPP1 1060 aa20.04■□□□□ 0.8
SMARCD1-202ENST00000394963 F6X3S4 739 aa20.04■□□□□ 0.8
SMARCD1-202ENST00000394963 ORAI2Q96SN7 254 aa20.03■□□□□ 0.8
SMARCD1-202ENST00000394963 TPRNQ4KMQ1 711 aa20.03■□□□□ 0.8
SMARCD1-202ENST00000394963 ATF3P18847 181 aa20.02■□□□□ 0.8
SMARCD1-202ENST00000394963 CABLES1Q8TDN4 633 aa20.02■□□□□ 0.8
SMARCD1-202ENST00000394963 SBNO2Q9Y2G9 1366 aa20.02■□□□□ 0.79
SMARCD1-202ENST00000394963 MROH1Q8NDA8 1641 aa20.02■□□□□ 0.79
SMARCD1-202ENST00000394963 TEFQ10587 303 aa20.01■□□□□ 0.79
SMARCD1-202ENST00000394963 ADGRB3O60242 1522 aa20.01■□□□□ 0.79
SMARCD1-202ENST00000394963 RSPH6AQ9H0K4 717 aa20.01■□□□□ 0.79
SMARCD1-202ENST00000394963 MROH2AA6NES4 1674 aa20.01■□□□□ 0.79
SMARCD1-202ENST00000394963 ABCC11Q96J66 1382 aa20.01■□□□□ 0.79
SMARCD1-202ENST00000394963 NPC1L1Q9UHC9 1359 aa20.01■□□□□ 0.79
SMARCD1-202ENST00000394963 LRRC59Q96AG4 307 aaKnown RBP20■□□□□ 0.79
SMARCD1-202ENST00000394963 DDRGK1Q96HY6 314 aa20■□□□□ 0.79
SMARCD1-202ENST00000394963 MAP3K19Q56UN5 1328 aa20■□□□□ 0.79
SMARCD1-202ENST00000394963 ZNF521Q96K83 1311 aa20■□□□□ 0.79
SMARCD1-202ENST00000394963 A2ML1A8K2U0 1454 aa19.99■□□□□ 0.79
SMARCD1-202ENST00000394963 ANXA1P04083 346 aa19.99■□□□□ 0.79
SMARCD1-202ENST00000394963 KIF16BQ96L93 1317 aa19.98■□□□□ 0.79
SMARCD1-202ENST00000394963 AIMP1Q12904 312 aaKnown RBP19.98■□□□□ 0.79
SMARCD1-202ENST00000394963 OS9Q13438 667 aaPredicted RBP19.98■□□□□ 0.79
SMARCD1-202ENST00000394963 ZMYM4Q5VZL5 1548 aa19.98■□□□□ 0.79
SMARCD1-202ENST00000394963 SYNMO15061 1565 aa19.97■□□□□ 0.79
SMARCD1-202ENST00000394963 DIP2BQ9P265 1576 aa19.97■□□□□ 0.79
SMARCD1-202ENST00000394963 NSD2O96028 1365 aa19.97■□□□□ 0.79
SMARCD1-202ENST00000394963 IL13P35225 146 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms