RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 RRAGDQ9NQL2 400 aaPredicted RBP16.52■□□□□ 0.23
NFKB1-202ENST00000394820 FAM43AQ8N2R8 423 aa16.51■□□□□ 0.23
NFKB1-202ENST00000394820 FAM13BQ9NYF5 915 aa16.51■□□□□ 0.23
NFKB1-202ENST00000394820 ZRANB1Q9UGI0 708 aa16.51■□□□□ 0.23
NFKB1-202ENST00000394820 FYB1O15117 783 aa16.5■□□□□ 0.23
NFKB1-202ENST00000394820 SLC4A10Q6U841 1118 aa16.49■□□□□ 0.23
NFKB1-202ENST00000394820 RNF214Q8ND24 703 aa16.49■□□□□ 0.23
NFKB1-202ENST00000394820 PRKAR2BP31323 418 aa16.49■□□□□ 0.23
NFKB1-202ENST00000394820 RRS1Q15050 365 aaKnown RBP16.48■□□□□ 0.23
NFKB1-202ENST00000394820 ABCA6Q8N139 1617 aa16.48■□□□□ 0.23
NFKB1-202ENST00000394820 XRCC6P12956 609 aaKnown RBP eCLIP16.48■□□□□ 0.23
NFKB1-202ENST00000394820 TMPOP42166 694 aaKnown RBP16.48■□□□□ 0.23
NFKB1-202ENST00000394820 EFCAB6Q5THR3 1501 aa16.48■□□□□ 0.23
NFKB1-202ENST00000394820 A0A1W2PP64 1363 aa16.47■□□□□ 0.23
NFKB1-202ENST00000394820 CEP152O94986 1710 aa16.47■□□□□ 0.23
NFKB1-202ENST00000394820 NOB1Q9ULX3 412 aaKnown RBP16.47■□□□□ 0.23
NFKB1-202ENST00000394820 KDM5AP29375 1690 aaKnown RBP16.47■□□□□ 0.23
NFKB1-202ENST00000394820 MCTP1Q6DN14 999 aa16.47■□□□□ 0.23
NFKB1-202ENST00000394820 EMILIN1Q9Y6C2 1016 aa16.47■□□□□ 0.23
NFKB1-202ENST00000394820 KDM2BQ8NHM5 1336 aa16.47■□□□□ 0.23
NFKB1-202ENST00000394820 POLR3AO14802 1390 aaPredicted RBP16.47■□□□□ 0.23
NFKB1-202ENST00000394820 SYNMO15061 1565 aa16.46■□□□□ 0.23
NFKB1-202ENST00000394820 ABCA9Q8IUA7 1624 aa16.46■□□□□ 0.23
NFKB1-202ENST00000394820 RNF17Q9BXT8 1623 aaKnown RBP16.46■□□□□ 0.23
NFKB1-202ENST00000394820 MAP3K4Q9Y6R4 1608 aa16.46■□□□□ 0.23
NFKB1-202ENST00000394820 CALD1Q05682 793 aaKnown RBP16.46■□□□□ 0.23
NFKB1-202ENST00000394820 NME9Q86XW9 330 aa16.46■□□□□ 0.23
NFKB1-202ENST00000394820 INO80Q9ULG1 1556 aaPredicted RBP16.46■□□□□ 0.23
NFKB1-202ENST00000394820 PPRC1Q5VV67 1664 aaKnown RBP16.46■□□□□ 0.23
NFKB1-202ENST00000394820 PDE3AQ14432 1141 aa16.46■□□□□ 0.22
NFKB1-202ENST00000394820 NPC1L1Q9UHC9 1359 aa16.45■□□□□ 0.22
NFKB1-202ENST00000394820 KIDINS220Q9ULH0 1771 aa16.45■□□□□ 0.22
NFKB1-202ENST00000394820 C14orf37Q86TY3 774 aa16.45■□□□□ 0.22
NFKB1-202ENST00000394820 NECTIN2Q92692 538 aa16.45■□□□□ 0.22
NFKB1-202ENST00000394820 KIF1BO60333 1816 aa16.45■□□□□ 0.22
NFKB1-202ENST00000394820 TRMT2AQ8IZ69 625 aaKnown RBP16.44■□□□□ 0.22
NFKB1-202ENST00000394820 IPO8O15397 1037 aaKnown RBP16.44■□□□□ 0.22
NFKB1-202ENST00000394820 SSH1Q8WYL5 1049 aa16.44■□□□□ 0.22
NFKB1-202ENST00000394820 RBM42Q9BTD8 480 aaKnown RBP16.44■□□□□ 0.22
NFKB1-202ENST00000394820 WDR63Q8IWG1 891 aa16.44■□□□□ 0.22
NFKB1-202ENST00000394820 ZNF428Q96B54 188 aa16.43■□□□□ 0.22
NFKB1-202ENST00000394820 ANKRD36BQ8N2N9 1353 aa16.43■□□□□ 0.22
NFKB1-202ENST00000394820 MYOM2P54296 1465 aa16.43■□□□□ 0.22
NFKB1-202ENST00000394820 ARAP3Q8WWN8 1544 aa16.43■□□□□ 0.22
NFKB1-202ENST00000394820 CEBPAP49715 358 aaPredicted RBP16.43■□□□□ 0.22
NFKB1-202ENST00000394820 DCTN1Q14203 1278 aa16.43■□□□□ 0.22
NFKB1-202ENST00000394820 SLC26A8Q96RN1 970 aa16.43■□□□□ 0.22
NFKB1-202ENST00000394820 GRPEL1Q9HAV7 217 aa16.43■□□□□ 0.22
NFKB1-202ENST00000394820 LAMC1P11047 1609 aa16.43■□□□□ 0.22
NFKB1-202ENST00000394820 CAVIN1Q6NZI2 390 aaKnown RBP16.42■□□□□ 0.22
NFKB1-202ENST00000394820 IQGAP1P46940 1657 aa16.42■□□□□ 0.22
NFKB1-202ENST00000394820 R3HCC1Q9Y3T6 440 aaKnown RBP16.42■□□□□ 0.22
NFKB1-202ENST00000394820 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.41■□□□□ 0.22
NFKB1-202ENST00000394820 DDX11L8A8MPP1 907 aa16.41■□□□□ 0.22
NFKB1-202ENST00000394820 TMEM57Q8N5G2 664 aa16.41■□□□□ 0.22
NFKB1-202ENST00000394820 NGEFQ8N5V2 710 aa16.41■□□□□ 0.22
NFKB1-202ENST00000394820 ESPNB1AK53 854 aa16.39■□□□□ 0.21
NFKB1-202ENST00000394820 MRE11P49959 708 aa16.39■□□□□ 0.21
NFKB1-202ENST00000394820 DDX19BQ9UMR2 479 aa16.39■□□□□ 0.21
NFKB1-202ENST00000394820 MLH3Q9UHC1 1453 aa16.39■□□□□ 0.21
NFKB1-202ENST00000394820 MROH2AA6NES4 1674 aa16.39■□□□□ 0.21
NFKB1-202ENST00000394820 MROH1Q8NDA8 1641 aa16.39■□□□□ 0.21
NFKB1-202ENST00000394820 MVPQ14764 893 aaKnown RBP16.39■□□□□ 0.21
NFKB1-202ENST00000394820 COG3Q96JB2 828 aa16.39■□□□□ 0.21
NFKB1-202ENST00000394820 ABCC3O15438 1527 aa16.39■□□□□ 0.21
NFKB1-202ENST00000394820 NUTM2GQ5VZR2 741 aa16.39■□□□□ 0.21
NFKB1-202ENST00000394820 PHACTR3Q96KR7 559 aa16.39■□□□□ 0.21
NFKB1-202ENST00000394820 TRIM6-TRIM34B2RNG4 842 aa16.38■□□□□ 0.21
NFKB1-202ENST00000394820 TRIM27P14373 513 aa16.38■□□□□ 0.21
NFKB1-202ENST00000394820 FAM83GA6ND36 823 aa16.38■□□□□ 0.21
NFKB1-202ENST00000394820 PKNOX2Q96KN3 472 aa16.38■□□□□ 0.21
NFKB1-202ENST00000394820 CHMP3Q9Y3E7 222 aa16.38■□□□□ 0.21
NFKB1-202ENST00000394820 NASPP49321 788 aaPredicted RBP16.37■□□□□ 0.21
NFKB1-202ENST00000394820 ATAD2Q6PL18 1390 aa16.37■□□□□ 0.21
NFKB1-202ENST00000394820 NUDT16Q96DE0 195 aaKnown RBP16.37■□□□□ 0.21
NFKB1-202ENST00000394820 TBC1D32Q96NH3 1257 aa16.37■□□□□ 0.21
NFKB1-202ENST00000394820 TRIM35Q9UPQ4 493 aa16.37■□□□□ 0.21
NFKB1-202ENST00000394820 INSRP06213 1382 aa16.36■□□□□ 0.21
NFKB1-202ENST00000394820 SBNO2Q9Y2G9 1366 aa16.36■□□□□ 0.21
NFKB1-202ENST00000394820 CASC1Q6TDU7 716 aa16.36■□□□□ 0.21
NFKB1-202ENST00000394820 PRPF40AO75400 957 aaKnown RBP16.36■□□□□ 0.21
NFKB1-202ENST00000394820 RILPL2Q969X0 211 aa16.36■□□□□ 0.21
NFKB1-202ENST00000394820 YTHDC2Q9H6S0 1430 aaKnown RBP16.36■□□□□ 0.21
NFKB1-202ENST00000394820 SSFA2P28290 1259 aa16.35■□□□□ 0.21
NFKB1-202ENST00000394820 POLKQ9UBT6 870 aa16.35■□□□□ 0.21
NFKB1-202ENST00000394820 HECW2Q9P2P5 1572 aa16.35■□□□□ 0.21
NFKB1-202ENST00000394820 VWDEQ8N2E2 1590 aa16.35■□□□□ 0.21
NFKB1-202ENST00000394820 TNPO1Q92973 898 aaKnown RBP16.35■□□□□ 0.21
NFKB1-202ENST00000394820 LTV1Q96GA3 475 aaPredicted RBP16.35■□□□□ 0.21
NFKB1-202ENST00000394820 ATF7IPQ6VMQ6 1270 aa16.34■□□□□ 0.21
NFKB1-202ENST00000394820 DEPDC5O75140 1603 aa16.34■□□□□ 0.21
NFKB1-202ENST00000394820 DTNBO60941 627 aa16.34■□□□□ 0.21
NFKB1-202ENST00000394820 ADGRB3O60242 1522 aa16.34■□□□□ 0.21
NFKB1-202ENST00000394820 RBM33Q96EV2 1170 aaKnown RBP16.33■□□□□ 0.21
NFKB1-202ENST00000394820 KIAA1211Q6ZU35 1233 aa16.33■□□□□ 0.2
NFKB1-202ENST00000394820 UBE2Q2Q8WVN8 375 aa16.33■□□□□ 0.2
NFKB1-202ENST00000394820 TSPYL6Q8N831 410 aa16.32■□□□□ 0.2
NFKB1-202ENST00000394820 FRMPD1Q5SYB0 1578 aa16.32■□□□□ 0.2
NFKB1-202ENST00000394820 WASLO00401 505 aaPredicted RBP16.32■□□□□ 0.2
NFKB1-202ENST00000394820 TRHP20396 242 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms