RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 DLC1Q96QB1 1528 aa20.01■□□□□ 0.79
PTBP1-204ENST00000394601 PNPLA6Q8IY17 1366 aa20■□□□□ 0.79
PTBP1-204ENST00000394601 NEUROD2Q15784 382 aa20■□□□□ 0.79
PTBP1-204ENST00000394601 SLKQ9H2G2 1235 aaPredicted RBP20■□□□□ 0.79
PTBP1-204ENST00000394601 TNNQ9UQP3 1299 aa20■□□□□ 0.79
PTBP1-204ENST00000394601 RLBP1P12271 317 aa19.99■□□□□ 0.79
PTBP1-204ENST00000394601 ATAD2Q6PL18 1390 aa19.99■□□□□ 0.79
PTBP1-204ENST00000394601 SPRYD3Q8NCJ5 442 aa19.99■□□□□ 0.79
PTBP1-204ENST00000394601 CDC42BPGQ6DT37 1551 aa19.99■□□□□ 0.79
PTBP1-204ENST00000394601 CYB5RLQ6IPT4 315 aa19.98■□□□□ 0.79
PTBP1-204ENST00000394601 GZF1Q9H116 711 aaPredicted RBP19.98■□□□□ 0.79
PTBP1-204ENST00000394601 SENP3Q9H4L4 574 aaPredicted RBP19.98■□□□□ 0.79
PTBP1-204ENST00000394601 FAM161AQ3B820 660 aa19.97■□□□□ 0.79
PTBP1-204ENST00000394601 MINK1Q8N4C8 1332 aaPredicted RBP19.97■□□□□ 0.79
PTBP1-204ENST00000394601 CLUAP1Q96AJ1 413 aa19.97■□□□□ 0.79
PTBP1-204ENST00000394601 CFAP53Q96M91 514 aa19.97■□□□□ 0.79
PTBP1-204ENST00000394601 GGNBP2Q9H3C7 697 aa19.97■□□□□ 0.79
PTBP1-204ENST00000394601 COG6Q9Y2V7 657 aa19.97■□□□□ 0.79
PTBP1-204ENST00000394601 TRIM35Q9UPQ4 493 aa19.96■□□□□ 0.79
PTBP1-204ENST00000394601 SRPK2P78362 688 aaKnown RBP19.95■□□□□ 0.78
PTBP1-204ENST00000394601 DDRGK1Q96HY6 314 aa19.95■□□□□ 0.78
PTBP1-204ENST00000394601 ZMYND15Q9H091 742 aa19.94■□□□□ 0.78
PTBP1-204ENST00000394601 FAM69CQ0P6D2 419 aa19.94■□□□□ 0.78
PTBP1-204ENST00000394601 RSPH6AQ9H0K4 717 aa19.94■□□□□ 0.78
PTBP1-204ENST00000394601 U2AF1L5P0DN76 240 aaPredicted RBP19.93■□□□□ 0.78
PTBP1-204ENST00000394601 U2AF1Q01081 240 aaKnown RBP eCLIP19.93■□□□□ 0.789e-17■■□□□ 14.4
PTBP1-204ENST00000394601 GLIPR1L2Q4G1C9 344 aa19.93■□□□□ 0.78
PTBP1-204ENST00000394601 CDK19Q9BWU1 502 aa19.93■□□□□ 0.78
PTBP1-204ENST00000394601 PCDHB15Q9Y5E8 787 aa19.92■□□□□ 0.78
PTBP1-204ENST00000394601 USP19O94966 1318 aa19.92■□□□□ 0.78
PTBP1-204ENST00000394601 POGKQ9P215 609 aa19.92■□□□□ 0.78
PTBP1-204ENST00000394601 PPP6R1Q9UPN7 881 aa19.92■□□□□ 0.78
PTBP1-204ENST00000394601 TMPOP42166 694 aaKnown RBP19.9■□□□□ 0.78
PTBP1-204ENST00000394601 ATP7BP35670 1465 aa19.9■□□□□ 0.78
PTBP1-204ENST00000394601 MAP2P11137 1827 aaKnown RBP19.9■□□□□ 0.78
PTBP1-204ENST00000394601 RIMS2Q9UQ26 1411 aa19.89■□□□□ 0.78
PTBP1-204ENST00000394601 CABP1Q9NZU7 370 aa19.89■□□□□ 0.78
PTBP1-204ENST00000394601 KIF13AQ9H1H9 1805 aa19.89■□□□□ 0.77
PTBP1-204ENST00000394601 BCL2L13Q9BXK5 485 aa19.89■□□□□ 0.77
PTBP1-204ENST00000394601 TERF2IPQ9NYB0 399 aa19.89■□□□□ 0.77
PTBP1-204ENST00000394601 LRRC7Q96NW7 1537 aa19.89■□□□□ 0.77
PTBP1-204ENST00000394601 KNDC1Q76NI1 1749 aa19.88■□□□□ 0.77
PTBP1-204ENST00000394601 CPSF1Q10570 1443 aaKnown RBP19.88■□□□□ 0.77
PTBP1-204ENST00000394601 MYH16Q9H6N6 1097 aa19.87■□□□□ 0.77
PTBP1-204ENST00000394601 WAPLQ7Z5K2 1190 aa19.87■□□□□ 0.77
PTBP1-204ENST00000394601 TSR2Q969E8 191 aaKnown RBP19.87■□□□□ 0.77
PTBP1-204ENST00000394601 ARID3AQ99856 593 aa19.87■□□□□ 0.77
PTBP1-204ENST00000394601 AAMPQ13685 434 aa19.86■□□□□ 0.77
PTBP1-204ENST00000394601 RRAGDQ9NQL2 400 aaPredicted RBP19.85■□□□□ 0.77
PTBP1-204ENST00000394601 MON2Q7Z3U7 1717 aa19.85■□□□□ 0.77
PTBP1-204ENST00000394601 FAM135BQ49AJ0 1406 aa19.84■□□□□ 0.77
PTBP1-204ENST00000394601 CT47B1P0C2W7 299 aaPredicted RBP19.84■□□□□ 0.77
PTBP1-204ENST00000394601 METP08581 1390 aa19.84■□□□□ 0.77
PTBP1-204ENST00000394601 IL16Q14005 1332 aa19.84■□□□□ 0.77
PTBP1-204ENST00000394601 SEC24BO95487 1268 aa19.84■□□□□ 0.77
PTBP1-204ENST00000394601 FBLN1P23142 703 aa19.83■□□□□ 0.77
PTBP1-204ENST00000394601 HSP90AA2PQ14568 343 aaPredicted RBP19.83■□□□□ 0.76
PTBP1-204ENST00000394601 AKAP12Q02952 1782 aa19.83■□□□□ 0.76
PTBP1-204ENST00000394601 CANXP27824 592 aaKnown RBP19.82■□□□□ 0.76
PTBP1-204ENST00000394601 POLKQ9UBT6 870 aa19.82■□□□□ 0.76
PTBP1-204ENST00000394601 EXOSC9Q06265 439 aaKnown RBP19.82■□□□□ 0.76
PTBP1-204ENST00000394601 MVPQ14764 893 aaKnown RBP19.82■□□□□ 0.76
PTBP1-204ENST00000394601 ZMYM3Q14202 1370 aa19.82■□□□□ 0.76
PTBP1-204ENST00000394601 C3P01024 1663 aa19.81■□□□□ 0.76
PTBP1-204ENST00000394601 U2SURPO15042 1029 aaKnown RBP19.81■□□□□ 0.76
PTBP1-204ENST00000394601 TECPR2O15040 1411 aa19.81■□□□□ 0.76
PTBP1-204ENST00000394601 HDGFL2Q7Z4V5 671 aaPredicted RBP19.81■□□□□ 0.76
PTBP1-204ENST00000394601 MAPK8IP3Q9UPT6 1336 aa19.8■□□□□ 0.76
PTBP1-204ENST00000394601 CPS1P31327 1500 aa19.8■□□□□ 0.76
PTBP1-204ENST00000394601 DIAPH1O60610 1272 aaKnown RBP19.8■□□□□ 0.76
PTBP1-204ENST00000394601 PLEKHG5O94827 1062 aa19.8■□□□□ 0.76
PTBP1-204ENST00000394601 SSH1Q8WYL5 1049 aa19.8■□□□□ 0.76
PTBP1-204ENST00000394601 FAM43AQ8N2R8 423 aa19.79■□□□□ 0.76
PTBP1-204ENST00000394601 TRIM27P14373 513 aa19.79■□□□□ 0.76
PTBP1-204ENST00000394601 PNNQ9H307 717 aaKnown RBP19.79■□□□□ 0.76
PTBP1-204ENST00000394601 PMFBP1Q8TBY8 1022 aa19.79■□□□□ 0.76
PTBP1-204ENST00000394601 PPIP5K1Q6PFW1 1433 aa19.78■□□□□ 0.76
PTBP1-204ENST00000394601 UBR1Q8IWV7 1749 aa19.78■□□□□ 0.76
PTBP1-204ENST00000394601 DLG5Q8TDM6 1919 aa19.78■□□□□ 0.76
PTBP1-204ENST00000394601 EDC4Q6P2E9 1401 aaKnown RBP19.77■□□□□ 0.76
PTBP1-204ENST00000394601 RIPK4P57078 832 aa19.77■□□□□ 0.76
PTBP1-204ENST00000394601 ZKSCAN2Q63HK3 967 aa19.77■□□□□ 0.76
PTBP1-204ENST00000394601 FCHSD2O94868 740 aa19.76■□□□□ 0.75
PTBP1-204ENST00000394601 PDZRN3Q9UPQ7 1066 aa19.76■□□□□ 0.75
PTBP1-204ENST00000394601 NRKQ7Z2Y5 1582 aa19.76■□□□□ 0.75
PTBP1-204ENST00000394601 WASLO00401 505 aaPredicted RBP19.75■□□□□ 0.75
PTBP1-204ENST00000394601 DZIP1LQ8IYY4 767 aaKnown RBP19.75■□□□□ 0.75
PTBP1-204ENST00000394601 STAG3Q9UJ98 1225 aa19.75■□□□□ 0.75
PTBP1-204ENST00000394601 HSP90AA1P07900 732 aaKnown RBP19.75■□□□□ 0.75
PTBP1-204ENST00000394601 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.75■□□□□ 0.75
PTBP1-204ENST00000394601 CDK12Q9NYV4 1490 aaPredicted RBP19.75■□□□□ 0.75
PTBP1-204ENST00000394601 PHACTR3Q96KR7 559 aa19.74■□□□□ 0.75
PTBP1-204ENST00000394601 TOPAZ1Q8N9V7 1692 aa19.73■□□□□ 0.75
PTBP1-204ENST00000394601 A0A0U1RQG5 324 aaPredicted RBP19.73■□□□□ 0.75
PTBP1-204ENST00000394601 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.73■□□□□ 0.75
PTBP1-204ENST00000394601 AATKQ6ZMQ8 1374 aa19.73■□□□□ 0.75
PTBP1-204ENST00000394601 NCKAP5LQ9HCH0 1330 aa19.73■□□□□ 0.75
PTBP1-204ENST00000394601 IL13P35225 146 aa19.73■□□□□ 0.75
PTBP1-204ENST00000394601 ZRANB1Q9UGI0 708 aa19.73■□□□□ 0.75
PTBP1-204ENST00000394601 ITSN1Q15811 1721 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms