RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 ADGRB2O60241 1585 aa17.72■□□□□ 0.43
GAPVD1-205ENST00000394084 CFAP74Q9C0B2 1584 aa17.72■□□□□ 0.43
GAPVD1-205ENST00000394084 TBC1D2Q9BYX2 928 aa17.71■□□□□ 0.43
GAPVD1-205ENST00000394084 TERF2IPQ9NYB0 399 aa17.71■□□□□ 0.43
GAPVD1-205ENST00000394084 FBLN1P23142 703 aa17.71■□□□□ 0.42
GAPVD1-205ENST00000394084 MFAP1P55081 439 aaKnown RBP17.7■□□□□ 0.42
GAPVD1-205ENST00000394084 ATF7IPQ6VMQ6 1270 aa17.7■□□□□ 0.42
GAPVD1-205ENST00000394084 PIK3C2BO00750 1634 aa17.7■□□□□ 0.42
GAPVD1-205ENST00000394084 DIAPH1O60610 1272 aaKnown RBP17.69■□□□□ 0.42
GAPVD1-205ENST00000394084 NCBP3Q53F19 620 aaKnown RBP17.69■□□□□ 0.42
GAPVD1-205ENST00000394084 TMEM57Q8N5G2 664 aa17.69■□□□□ 0.42
GAPVD1-205ENST00000394084 CT47B1P0C2W7 299 aaPredicted RBP17.69■□□□□ 0.42
GAPVD1-205ENST00000394084 DDX19BQ9UMR2 479 aa17.69■□□□□ 0.42
GAPVD1-205ENST00000394084 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.68■□□□□ 0.42
GAPVD1-205ENST00000394084 SLC52A1Q9NWF4 448 aa17.68■□□□□ 0.42
GAPVD1-205ENST00000394084 FBXO31Q5XUX0 539 aaPredicted RBP17.67■□□□□ 0.42
GAPVD1-205ENST00000394084 ANO8Q9HCE9 1232 aaPredicted RBP17.67■□□□□ 0.42
GAPVD1-205ENST00000394084 CABP1Q9NZU7 370 aa17.67■□□□□ 0.42
GAPVD1-205ENST00000394084 COL3A1P02461 1466 aaPredicted RBP17.67■□□□□ 0.42
GAPVD1-205ENST00000394084 HDGFL2Q7Z4V5 671 aaPredicted RBP17.67■□□□□ 0.42
GAPVD1-205ENST00000394084 CDK19Q9BWU1 502 aa17.67■□□□□ 0.42
GAPVD1-205ENST00000394084 ANTXR1Q9H6X2 564 aa17.67■□□□□ 0.42
GAPVD1-205ENST00000394084 ATAD2Q6PL18 1390 aa17.67■□□□□ 0.42
GAPVD1-205ENST00000394084 DIP2CQ9Y2E4 1556 aa17.67■□□□□ 0.42
GAPVD1-205ENST00000394084 YEATS2Q9ULM3 1422 aa17.66■□□□□ 0.42
GAPVD1-205ENST00000394084 MYO5BQ9ULV0 1848 aa17.66■□□□□ 0.42
GAPVD1-205ENST00000394084 PTPRMP28827 1452 aa17.65■□□□□ 0.42
GAPVD1-205ENST00000394084 C22orf23Q9BZE7 217 aa17.65■□□□□ 0.42
GAPVD1-205ENST00000394084 RIMBP3CA6NJZ7 1639 aa17.65■□□□□ 0.42
GAPVD1-205ENST00000394084 RIMBP3BA6NNM3 1639 aa17.65■□□□□ 0.42
GAPVD1-205ENST00000394084 RIMBP3Q9UFD9 1639 aa17.65■□□□□ 0.42
GAPVD1-205ENST00000394084 YTHDC2Q9H6S0 1430 aaKnown RBP17.65■□□□□ 0.42
GAPVD1-205ENST00000394084 HDAC1Q13547 482 aaPredicted RBP17.65■□□□□ 0.42
GAPVD1-205ENST00000394084 STAG3Q9UJ98 1225 aa17.65■□□□□ 0.42
GAPVD1-205ENST00000394084 ZMYM3Q14202 1370 aa17.64■□□□□ 0.41
GAPVD1-205ENST00000394084 CD163L1Q9NR16 1453 aa17.64■□□□□ 0.41
GAPVD1-205ENST00000394084 PRKAR2BP31323 418 aa17.63■□□□□ 0.41
GAPVD1-205ENST00000394084 ARHGAP31Q2M1Z3 1444 aa17.63■□□□□ 0.41
GAPVD1-205ENST00000394084 HMOX1P09601 288 aa17.62■□□□□ 0.41
GAPVD1-205ENST00000394084 ARXQ96QS3 562 aa17.62■□□□□ 0.41
GAPVD1-205ENST00000394084 THUMPD2Q9BTF0 503 aaKnown RBP17.62■□□□□ 0.41
GAPVD1-205ENST00000394084 IL16Q14005 1332 aa17.62■□□□□ 0.41
GAPVD1-205ENST00000394084 ZFYVE9O95405 1425 aa17.62■□□□□ 0.41
GAPVD1-205ENST00000394084 ZBTB40Q9NUA8 1239 aa17.62■□□□□ 0.41
GAPVD1-205ENST00000394084 NEO1Q92859 1461 aa17.62■□□□□ 0.41
GAPVD1-205ENST00000394084 LNPKQ9C0E8 428 aa17.61■□□□□ 0.41
GAPVD1-205ENST00000394084 WAPLQ7Z5K2 1190 aa17.61■□□□□ 0.41
GAPVD1-205ENST00000394084 KIF16BQ96L93 1317 aa17.61■□□□□ 0.41
GAPVD1-205ENST00000394084 IPO8O15397 1037 aaKnown RBP17.61■□□□□ 0.41
GAPVD1-205ENST00000394084 SMC5Q8IY18 1101 aa17.61■□□□□ 0.41
GAPVD1-205ENST00000394084 ELL2O00472 640 aaPredicted RBP17.59■□□□□ 0.41
GAPVD1-205ENST00000394084 PNNQ9H307 717 aaKnown RBP17.59■□□□□ 0.41
GAPVD1-205ENST00000394084 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.59■□□□□ 0.41
GAPVD1-205ENST00000394084 PHACTR3Q96KR7 559 aa17.59■□□□□ 0.41
GAPVD1-205ENST00000394084 FCHSD2O94868 740 aa17.58■□□□□ 0.4
GAPVD1-205ENST00000394084 C1orf115Q9H7X2 142 aa17.58■□□□□ 0.4
GAPVD1-205ENST00000394084 POLKQ9UBT6 870 aa17.58■□□□□ 0.4
GAPVD1-205ENST00000394084 TMEM131LA2VDJ0 1609 aa17.58■□□□□ 0.4
GAPVD1-205ENST00000394084 RSPH6AQ9H0K4 717 aa17.58■□□□□ 0.4
GAPVD1-205ENST00000394084 PNPLA6Q8IY17 1366 aa17.57■□□□□ 0.4
GAPVD1-205ENST00000394084 LRRC7Q96NW7 1537 aa17.56■□□□□ 0.4
GAPVD1-205ENST00000394084 PREX1Q8TCU6 1659 aa17.56■□□□□ 0.4
GAPVD1-205ENST00000394084 MED14O60244 1454 aa17.56■□□□□ 0.4
GAPVD1-205ENST00000394084 EMILIN1Q9Y6C2 1016 aa17.56■□□□□ 0.4
GAPVD1-205ENST00000394084 GZF1Q9H116 711 aaPredicted RBP17.56■□□□□ 0.4
GAPVD1-205ENST00000394084 ANKRD26Q9UPS8 1709 aa17.55■□□□□ 0.4
GAPVD1-205ENST00000394084 ALDH1L2Q3SY69 923 aa17.55■□□□□ 0.4
GAPVD1-205ENST00000394084 TSPYL6Q8N831 410 aa17.55■□□□□ 0.4
GAPVD1-205ENST00000394084 NUCB1Q02818 461 aa17.55■□□□□ 0.4
GAPVD1-205ENST00000394084 ZRANB1Q9UGI0 708 aa17.54■□□□□ 0.4
GAPVD1-205ENST00000394084 ALKQ9UM73 1620 aa17.54■□□□□ 0.4
GAPVD1-205ENST00000394084 ARHGEF40Q8TER5 1519 aa17.54■□□□□ 0.4
GAPVD1-205ENST00000394084 CHD1LQ86WJ1 897 aa17.54■□□□□ 0.4
GAPVD1-205ENST00000394084 RICTORQ6R327 1708 aa17.54■□□□□ 0.4
GAPVD1-205ENST00000394084 ANKRD45Q5TZF3 282 aa17.53■□□□□ 0.4
GAPVD1-205ENST00000394084 HSCBQ8IWL3 235 aa17.53■□□□□ 0.4
GAPVD1-205ENST00000394084 MCM4P33991 863 aa17.53■□□□□ 0.4
GAPVD1-205ENST00000394084 NFE2L2Q16236 605 aa17.53■□□□□ 0.4
GAPVD1-205ENST00000394084 FAM135BQ49AJ0 1406 aa17.52■□□□□ 0.4
GAPVD1-205ENST00000394084 CLTCQ00610 1675 aaKnown RBP17.52■□□□□ 0.4
GAPVD1-205ENST00000394084 NME9Q86XW9 330 aa17.52■□□□□ 0.4
GAPVD1-205ENST00000394084 CHMP5Q9NZZ3 219 aa17.52■□□□□ 0.4
GAPVD1-205ENST00000394084 VAMP4O75379 141 aa17.52■□□□□ 0.39
GAPVD1-205ENST00000394084 MRPL50Q8N5N7 158 aaKnown RBP17.51■□□□□ 0.39
GAPVD1-205ENST00000394084 KIF20BQ96Q89 1820 aa17.51■□□□□ 0.39
GAPVD1-205ENST00000394084 ZBTB7BO15156 539 aaPredicted RBP17.5■□□□□ 0.39
GAPVD1-205ENST00000394084 MLECQ14165 292 aa17.5■□□□□ 0.39
GAPVD1-205ENST00000394084 NCKAP5LQ9HCH0 1330 aa17.5■□□□□ 0.39
GAPVD1-205ENST00000394084 MBIPQ9NS73 344 aa17.49■□□□□ 0.39
GAPVD1-205ENST00000394084 RRS1Q15050 365 aaKnown RBP17.48■□□□□ 0.39
GAPVD1-205ENST00000394084 PPIP5K1Q6PFW1 1433 aa17.48■□□□□ 0.39
GAPVD1-205ENST00000394084 FAM83GA6ND36 823 aa17.48■□□□□ 0.39
GAPVD1-205ENST00000394084 GNAI1P63096 354 aa17.48■□□□□ 0.39
GAPVD1-205ENST00000394084 IL13P35225 146 aa17.47■□□□□ 0.39
GAPVD1-205ENST00000394084 DCTN1Q14203 1278 aa17.47■□□□□ 0.39
GAPVD1-205ENST00000394084 L1TD1Q5T7N2 865 aaKnown RBP17.47■□□□□ 0.39
GAPVD1-205ENST00000394084 TWISTNBQ3B726 338 aaPredicted RBP17.46■□□□□ 0.39
GAPVD1-205ENST00000394084 MAP2P11137 1827 aaKnown RBP17.46■□□□□ 0.39
GAPVD1-205ENST00000394084 C8orf58Q8NAV2 365 aa17.46■□□□□ 0.39
GAPVD1-205ENST00000394084 TRAK2O60296 914 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms