RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 RIMS2Q9UQ26 1411 aa19.18■□□□□ 0.66
SHTN1-204ENST00000392903 REREQ9P2R6 1566 aa19.18■□□□□ 0.66
SHTN1-204ENST00000392903 HDGFL2Q7Z4V5 671 aaPredicted RBP19.17■□□□□ 0.66
SHTN1-204ENST00000392903 NINLQ9Y2I6 1382 aa19.17■□□□□ 0.66
SHTN1-204ENST00000392903 CD163L1Q9NR16 1453 aa19.17■□□□□ 0.66
SHTN1-204ENST00000392903 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.17■□□□□ 0.66
SHTN1-204ENST00000392903 BECN1Q14457 450 aa19.16■□□□□ 0.66
SHTN1-204ENST00000392903 FBLN1P23142 703 aa19.16■□□□□ 0.66
SHTN1-204ENST00000392903 CANXP27824 592 aaKnown RBP19.16■□□□□ 0.66
SHTN1-204ENST00000392903 ZMYM3Q14202 1370 aa19.16■□□□□ 0.66
SHTN1-204ENST00000392903 SPATA31D1Q6ZQQ2 1576 aa19.15■□□□□ 0.66
SHTN1-204ENST00000392903 PHF23Q9BUL5 403 aaPredicted RBP19.15■□□□□ 0.66
SHTN1-204ENST00000392903 IQSEC2Q5JU85 1478 aa19.14■□□□□ 0.66
SHTN1-204ENST00000392903 ARHGEF40Q8TER5 1519 aa19.14■□□□□ 0.65
SHTN1-204ENST00000392903 GLIPR1L2Q4G1C9 344 aa19.14■□□□□ 0.65
SHTN1-204ENST00000392903 KIF13AQ9H1H9 1805 aa19.13■□□□□ 0.65
SHTN1-204ENST00000392903 TXNDC2Q86VQ3 553 aa19.13■□□□□ 0.65
SHTN1-204ENST00000392903 WDR63Q8IWG1 891 aa19.13■□□□□ 0.65
SHTN1-204ENST00000392903 PANK1Q8TE04 598 aa19.13■□□□□ 0.65
SHTN1-204ENST00000392903 BCL2L13Q9BXK5 485 aa19.13■□□□□ 0.65
SHTN1-204ENST00000392903 ANTXR1Q9H6X2 564 aa19.12■□□□□ 0.65
SHTN1-204ENST00000392903 COG6Q9Y2V7 657 aa19.12■□□□□ 0.65
SHTN1-204ENST00000392903 NLRP1Q9C000 1473 aa19.12■□□□□ 0.65
SHTN1-204ENST00000392903 METP08581 1390 aa19.11■□□□□ 0.65
SHTN1-204ENST00000392903 RARSP54136 660 aaKnown RBP19.11■□□□□ 0.65
SHTN1-204ENST00000392903 CCDC27Q2M243 656 aa19.1■□□□□ 0.65
SHTN1-204ENST00000392903 PKNOX2Q96KN3 472 aa19.1■□□□□ 0.65
SHTN1-204ENST00000392903 MAPK8IP3Q9UPT6 1336 aa19.1■□□□□ 0.65
SHTN1-204ENST00000392903 NCKAP5LQ9HCH0 1330 aa19.09■□□□□ 0.65
SHTN1-204ENST00000392903 PLEKHF1Q96S99 279 aa19.09■□□□□ 0.65
SHTN1-204ENST00000392903 PDE3AQ14432 1141 aa19.08■□□□□ 0.64
SHTN1-204ENST00000392903 TSR2Q969E8 191 aaKnown RBP19.08■□□□□ 0.64
SHTN1-204ENST00000392903 DIAPH1O60610 1272 aaKnown RBP19.08■□□□□ 0.64
SHTN1-204ENST00000392903 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.08■□□□□ 0.64
SHTN1-204ENST00000392903 TNNQ9UQP3 1299 aa19.08■□□□□ 0.64
SHTN1-204ENST00000392903 SEC24BO95487 1268 aa19.07■□□□□ 0.64
SHTN1-204ENST00000392903 TMPOP42166 694 aaKnown RBP19.07■□□□□ 0.64
SHTN1-204ENST00000392903 SLKQ9H2G2 1235 aaPredicted RBP19.07■□□□□ 0.64
SHTN1-204ENST00000392903 FSD2A1L4K1 749 aa19.06■□□□□ 0.64
SHTN1-204ENST00000392903 IGHDP01880 384 aa19.06■□□□□ 0.64
SHTN1-204ENST00000392903 CLCN1P35523 988 aa19.06■□□□□ 0.64
SHTN1-204ENST00000392903 MYH16Q9H6N6 1097 aa19.06■□□□□ 0.64
SHTN1-204ENST00000392903 WASLO00401 505 aaPredicted RBP19.06■□□□□ 0.64
SHTN1-204ENST00000392903 CLUAP1Q96AJ1 413 aa19.06■□□□□ 0.64
SHTN1-204ENST00000392903 PLPPR3Q6T4P5 718 aa19.05■□□□□ 0.64
SHTN1-204ENST00000392903 SETD1AO15047 1707 aaKnown RBP19.05■□□□□ 0.64
SHTN1-204ENST00000392903 XRCC6P12956 609 aaKnown RBP eCLIP19.05■□□□□ 0.64
SHTN1-204ENST00000392903 COL3A1P02461 1466 aaPredicted RBP19.05■□□□□ 0.64
SHTN1-204ENST00000392903 TRIM35Q9UPQ4 493 aa19.04■□□□□ 0.64
SHTN1-204ENST00000392903 RLBP1P12271 317 aa19.04■□□□□ 0.64
SHTN1-204ENST00000392903 PNNQ9H307 717 aaKnown RBP19.04■□□□□ 0.64
SHTN1-204ENST00000392903 ZRANB1Q9UGI0 708 aa19.04■□□□□ 0.64
SHTN1-204ENST00000392903 ANKRD26Q9UPS8 1709 aa19.03■□□□□ 0.64
SHTN1-204ENST00000392903 NRXN3Q9Y4C0 1643 aa19.03■□□□□ 0.64
SHTN1-204ENST00000392903 DLC1Q96QB1 1528 aa19.03■□□□□ 0.64
SHTN1-204ENST00000392903 GOLGA6L3A6NEY3 463 aa19.03■□□□□ 0.64
SHTN1-204ENST00000392903 RIPK4P57078 832 aa19.03■□□□□ 0.64
SHTN1-204ENST00000392903 POLKQ9UBT6 870 aa19.03■□□□□ 0.64
SHTN1-204ENST00000392903 MED14O60244 1454 aa19.03■□□□□ 0.64
SHTN1-204ENST00000392903 TNRQ92752 1358 aa19.02■□□□□ 0.64
SHTN1-204ENST00000392903 CEBPAP49715 358 aaPredicted RBP19.02■□□□□ 0.64
SHTN1-204ENST00000392903 HDGFP51858 240 aaKnown RBP19.02■□□□□ 0.64
SHTN1-204ENST00000392903 NME9Q86XW9 330 aa19.02■□□□□ 0.64
SHTN1-204ENST00000392903 PPIP5K1Q6PFW1 1433 aa19.02■□□□□ 0.64
SHTN1-204ENST00000392903 NUDT16Q96DE0 195 aaKnown RBP19.02■□□□□ 0.63
SHTN1-204ENST00000392903 KIF20BQ96Q89 1820 aa19.01■□□□□ 0.63
SHTN1-204ENST00000392903 RRP9O43818 475 aaKnown RBP19.01■□□□□ 0.63
SHTN1-204ENST00000392903 EXOSC9Q06265 439 aaKnown RBP19.01■□□□□ 0.63
SHTN1-204ENST00000392903 ADGRB2O60241 1585 aa19■□□□□ 0.63
SHTN1-204ENST00000392903 NAP1L5Q96NT1 182 aaPredicted RBP19■□□□□ 0.63
SHTN1-204ENST00000392903 EMILIN1Q9Y6C2 1016 aa19■□□□□ 0.63
SHTN1-204ENST00000392903 PNPLA6Q8IY17 1366 aa19■□□□□ 0.63
SHTN1-204ENST00000392903 HMOX1P09601 288 aa19■□□□□ 0.63
SHTN1-204ENST00000392903 TBC1D32Q96NH3 1257 aa19■□□□□ 0.63
SHTN1-204ENST00000392903 NUTM2FA1L443 756 aa18.99■□□□□ 0.63
SHTN1-204ENST00000392903 UPF2Q9HAU5 1272 aaKnown RBP18.99■□□□□ 0.63
SHTN1-204ENST00000392903 ATP7BP35670 1465 aa18.98■□□□□ 0.63
SHTN1-204ENST00000392903 NCBP3Q53F19 620 aaKnown RBP18.98■□□□□ 0.63
SHTN1-204ENST00000392903 TBC1D2Q9BYX2 928 aa18.98■□□□□ 0.63
SHTN1-204ENST00000392903 MAP2P11137 1827 aaKnown RBP18.98■□□□□ 0.63
SHTN1-204ENST00000392903 PRKAR2BP31323 418 aa18.98■□□□□ 0.63
SHTN1-204ENST00000392903 HSP90AA2PQ14568 343 aaPredicted RBP18.98■□□□□ 0.63
SHTN1-204ENST00000392903 CCDC61Q9Y6R9 512 aa18.98■□□□□ 0.63
SHTN1-204ENST00000392903 TMEM2Q9UHN6 1383 aa18.97■□□□□ 0.63
SHTN1-204ENST00000392903 HSP90AA1P07900 732 aaKnown RBP18.97■□□□□ 0.63
SHTN1-204ENST00000392903 LTKP29376 864 aa18.97■□□□□ 0.63
SHTN1-204ENST00000392903 MCM4P33991 863 aa18.97■□□□□ 0.63
SHTN1-204ENST00000392903 FCHSD2O94868 740 aa18.96■□□□□ 0.63
SHTN1-204ENST00000392903 CPSF1Q10570 1443 aaKnown RBP18.96■□□□□ 0.63
SHTN1-204ENST00000392903 PCDHB15Q9Y5E8 787 aa18.95■□□□□ 0.62
SHTN1-204ENST00000392903 RRS1Q15050 365 aaKnown RBP18.95■□□□□ 0.62
SHTN1-204ENST00000392903 PHACTR3Q96KR7 559 aa18.95■□□□□ 0.62
SHTN1-204ENST00000392903 SLC26A8Q96RN1 970 aa18.95■□□□□ 0.62
SHTN1-204ENST00000392903 PANK2Q9BZ23 570 aa18.95■□□□□ 0.62
SHTN1-204ENST00000392903 SMC4Q9NTJ3 1288 aa18.95■□□□□ 0.62
SHTN1-204ENST00000392903 ROBO2Q9HCK4 1378 aa18.94■□□□□ 0.62
SHTN1-204ENST00000392903 ZMYND15Q9H091 742 aa18.94■□□□□ 0.62
SHTN1-204ENST00000392903 EDC4Q6P2E9 1401 aaKnown RBP18.93■□□□□ 0.62
SHTN1-204ENST00000392903 AAMPQ13685 434 aa18.93■□□□□ 0.62
SHTN1-204ENST00000392903 VSIG10Q8N0Z9 540 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms