RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 LTKP29376 864 aa33.26■■■□□ 2.92
SMARCD3-203ENST00000392811 PLEKHG1Q9ULL1 1385 aa33.26■■■□□ 2.92
SMARCD3-203ENST00000392811 KDM2BQ8NHM5 1336 aa33.26■■■□□ 2.91
SMARCD3-203ENST00000392811 CDC42BPGQ6DT37 1551 aa33.25■■■□□ 2.91
SMARCD3-203ENST00000392811 ROBO2Q9HCK4 1378 aa33.25■■■□□ 2.91
SMARCD3-203ENST00000392811 ANP32EQ9BTT0 268 aa33.24■■■□□ 2.91
SMARCD3-203ENST00000392811 C3P01024 1663 aa33.24■■■□□ 2.91
SMARCD3-203ENST00000392811 NCKAP5LQ9HCH0 1330 aa33.23■■■□□ 2.91
SMARCD3-203ENST00000392811 CCDC61Q9Y6R9 512 aa33.23■■■□□ 2.91
SMARCD3-203ENST00000392811 POLKQ9UBT6 870 aa33.22■■■□□ 2.91
SMARCD3-203ENST00000392811 TMPOP42166 694 aaKnown RBP33.21■■■□□ 2.91
SMARCD3-203ENST00000392811 MAPK8IP3Q9UPT6 1336 aa33.21■■■□□ 2.91
SMARCD3-203ENST00000392811 FBLN1P23142 703 aa33.21■■■□□ 2.91
SMARCD3-203ENST00000392811 MYH16Q9H6N6 1097 aa33.21■■■□□ 2.91
SMARCD3-203ENST00000392811 MON2Q7Z3U7 1717 aa33.2■■■□□ 2.91
SMARCD3-203ENST00000392811 RARSP54136 660 aaKnown RBP33.2■■■□□ 2.91
SMARCD3-203ENST00000392811 MS4A1P11836 297 aa33.19■■■□□ 2.9
SMARCD3-203ENST00000392811 PDE3AQ14432 1141 aa33.19■■■□□ 2.9
SMARCD3-203ENST00000392811 CENPQQ7L2Z9 268 aaPredicted RBP33.19■■■□□ 2.9
SMARCD3-203ENST00000392811 NME9Q86XW9 330 aa33.19■■■□□ 2.9
SMARCD3-203ENST00000392811 MAP2P11137 1827 aaKnown RBP33.18■■■□□ 2.9
SMARCD3-203ENST00000392811 AKAP12Q02952 1782 aa33.17■■■□□ 2.9
SMARCD3-203ENST00000392811 PRR36Q9H6K5 1346 aa33.17■■■□□ 2.9
SMARCD3-203ENST00000392811 FER1L4A9Z1Z3 1794 aa33.17■■■□□ 2.9
SMARCD3-203ENST00000392811 CANXP27824 592 aaKnown RBP33.16■■■□□ 2.9
SMARCD3-203ENST00000392811 TRIM35Q9UPQ4 493 aa33.16■■■□□ 2.9
SMARCD3-203ENST00000392811 ITSN1Q15811 1721 aa33.16■■■□□ 2.9
SMARCD3-203ENST00000392811 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.16■■■□□ 2.9
SMARCD3-203ENST00000392811 PPM1GO15355 546 aaPredicted RBP33.16■■■□□ 2.9
SMARCD3-203ENST00000392811 SKAP1Q86WV1 359 aa33.15■■■□□ 2.9
SMARCD3-203ENST00000392811 PNNQ9H307 717 aaKnown RBP33.14■■■□□ 2.9
SMARCD3-203ENST00000392811 ZRANB1Q9UGI0 708 aa33.14■■■□□ 2.9
SMARCD3-203ENST00000392811 EID1Q9Y6B2 187 aa33.14■■■□□ 2.9
SMARCD3-203ENST00000392811 SLIT1O75093 1534 aa33.13■■■□□ 2.89
SMARCD3-203ENST00000392811 PLPPR3Q6T4P5 718 aa33.12■■■□□ 2.89
SMARCD3-203ENST00000392811 ARHGAP23Q9P227 1491 aa33.12■■■□□ 2.89
SMARCD3-203ENST00000392811 SLC26A8Q96RN1 970 aa33.12■■■□□ 2.89
SMARCD3-203ENST00000392811 LRRC7Q96NW7 1537 aa33.12■■■□□ 2.89
SMARCD3-203ENST00000392811 FRAT1Q92837 279 aaPredicted RBP33.11■■■□□ 2.89
SMARCD3-203ENST00000392811 PTPRUQ92729 1446 aa33.11■■■□□ 2.89
SMARCD3-203ENST00000392811 FCHSD2O94868 740 aa33.11■■■□□ 2.89
SMARCD3-203ENST00000392811 PDE4AP27815 886 aa33.11■■■□□ 2.89
SMARCD3-203ENST00000392811 PANK1Q8TE04 598 aa33.11■■■□□ 2.89
SMARCD3-203ENST00000392811 EMILIN1Q9Y6C2 1016 aa33.1■■■□□ 2.89
SMARCD3-203ENST00000392811 AATKQ6ZMQ8 1374 aa33.09■■■□□ 2.89
SMARCD3-203ENST00000392811 RIPK4P57078 832 aa33.09■■■□□ 2.89
SMARCD3-203ENST00000392811 ZNF692Q9BU19 519 aaPredicted RBP33.09■■■□□ 2.89
SMARCD3-203ENST00000392811 TSR2Q969E8 191 aaKnown RBP33.08■■■□□ 2.89
SMARCD3-203ENST00000392811 COG3Q96JB2 828 aa33.07■■■□□ 2.89
SMARCD3-203ENST00000392811 RSPH6AQ9H0K4 717 aa33.07■■■□□ 2.89
SMARCD3-203ENST00000392811 CDK12Q9NYV4 1490 aaPredicted RBP33.07■■■□□ 2.88
SMARCD3-203ENST00000392811 BACH2Q9BYV9 841 aa33.07■■■□□ 2.88
SMARCD3-203ENST00000392811 COG6Q9Y2V7 657 aa33.07■■■□□ 2.88
SMARCD3-203ENST00000392811 TOPAZ1Q8N9V7 1692 aa33.06■■■□□ 2.88
SMARCD3-203ENST00000392811 BCL2L13Q9BXK5 485 aa33.06■■■□□ 2.88
SMARCD3-203ENST00000392811 IL16Q14005 1332 aa33.06■■■□□ 2.88
SMARCD3-203ENST00000392811 PRKAR2BP31323 418 aa33.04■■■□□ 2.88
SMARCD3-203ENST00000392811 CT47B1P0C2W7 299 aaPredicted RBP33.03■■■□□ 2.88
SMARCD3-203ENST00000392811 ANP32AP39687 249 aaKnown RBP33.03■■■□□ 2.88
SMARCD3-203ENST00000392811 TRHP20396 242 aaPredicted RBP33.02■■■□□ 2.88
SMARCD3-203ENST00000392811 IL13P35225 146 aa33.02■■■□□ 2.88
SMARCD3-203ENST00000392811 MYT1Q01538 1121 aa33.01■■■□□ 2.88
SMARCD3-203ENST00000392811 EXOSC9Q06265 439 aaKnown RBP33.01■■■□□ 2.88
SMARCD3-203ENST00000392811 TBX22Q9Y458 520 aa33.01■■■□□ 2.88
SMARCD3-203ENST00000392811 NRKQ7Z2Y5 1582 aa33.01■■■□□ 2.87
SMARCD3-203ENST00000392811 THEMISQ8N1K5 641 aaPredicted RBP33.01■■■□□ 2.87
SMARCD3-203ENST00000392811 CLUAP1Q96AJ1 413 aa33.01■■■□□ 2.87
SMARCD3-203ENST00000392811 AMOTL2Q9Y2J4 779 aa33.01■■■□□ 2.87
SMARCD3-203ENST00000392811 TNNQ9UQP3 1299 aa33■■■□□ 2.87
SMARCD3-203ENST00000392811 PLEKHG3A1L390 1219 aa32.99■■■□□ 2.87
SMARCD3-203ENST00000392811 NUTM2FA1L443 756 aa32.99■■■□□ 2.87
SMARCD3-203ENST00000392811 HMOX1P09601 288 aa32.99■■■□□ 2.87
SMARCD3-203ENST00000392811 RLBP1P12271 317 aa32.99■■■□□ 2.87
SMARCD3-203ENST00000392811 ERICH6Q7L0X2 663 aa32.99■■■□□ 2.87
SMARCD3-203ENST00000392811 ACEP12821 1306 aa32.98■■■□□ 2.87
SMARCD3-203ENST00000392811 RRS1Q15050 365 aaKnown RBP32.98■■■□□ 2.87
SMARCD3-203ENST00000392811 NEFMP07197 916 aa32.97■■■□□ 2.87
SMARCD3-203ENST00000392811 TTC21BQ7Z4L5 1316 aa32.97■■■□□ 2.87
SMARCD3-203ENST00000392811 IGHDP01880 384 aa32.95■■■□□ 2.87
SMARCD3-203ENST00000392811 PTCH1Q13635 1447 aa32.95■■■□□ 2.87
SMARCD3-203ENST00000392811 PHACTR3Q96KR7 559 aa32.95■■■□□ 2.87
SMARCD3-203ENST00000392811 DIP2AQ14689 1571 aa32.95■■■□□ 2.86
SMARCD3-203ENST00000392811 NFE2L2Q16236 605 aa32.93■■■□□ 2.86
SMARCD3-203ENST00000392811 USP6P35125 1406 aa32.93■■■□□ 2.86
SMARCD3-203ENST00000392811 IPO9Q96P70 1041 aaKnown RBP32.92■■■□□ 2.86
SMARCD3-203ENST00000392811 AAMPQ13685 434 aa32.91■■■□□ 2.86
SMARCD3-203ENST00000392811 ZKSCAN2Q63HK3 967 aa32.9■■■□□ 2.86
SMARCD3-203ENST00000392811 SMC4Q9NTJ3 1288 aa32.9■■■□□ 2.86
SMARCD3-203ENST00000392811 OVOS2A0A0J9YW53 1432 aa32.89■■■□□ 2.86
SMARCD3-203ENST00000392811 OVOS2Q6IE36 1432 aa32.89■■■□□ 2.86
SMARCD3-203ENST00000392811 NOP58Q9Y2X3 529 aaKnown RBP32.89■■■□□ 2.86
SMARCD3-203ENST00000392811 SSH1Q8WYL5 1049 aa32.88■■■□□ 2.85
SMARCD3-203ENST00000392811 NPM2Q86SE8 214 aaKnown RBP32.87■■■□□ 2.85
SMARCD3-203ENST00000392811 XRN1Q8IZH2 1706 aaKnown RBP32.87■■■□□ 2.85
SMARCD3-203ENST00000392811 SSH2Q76I76 1423 aa32.85■■■□□ 2.85
SMARCD3-203ENST00000392811 RGS3P49796 1198 aa32.85■■■□□ 2.85
SMARCD3-203ENST00000392811 CEP170BQ9Y4F5 1589 aaPredicted RBP32.85■■■□□ 2.85
SMARCD3-203ENST00000392811 NALCNQ8IZF0 1738 aa32.84■■■□□ 2.85
SMARCD3-203ENST00000392811 DZIP1LQ8IYY4 767 aaKnown RBP32.84■■■□□ 2.85
SMARCD3-203ENST00000392811 MVPQ14764 893 aaKnown RBP32.84■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms