RNA–Protein interactions for RNA: ENST00000381323.7

FAM49A-201, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49A, Length 4,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-201ENST00000381323 CDCA8Q53HL2 280 aa10.91□□□□□ -0.66
FAM49A-201ENST00000381323 TECPR2O15040 1411 aa10.91□□□□□ -0.66
FAM49A-201ENST00000381323 COL16A1Q07092 1604 aaPredicted RBP10.9□□□□□ -0.66
FAM49A-201ENST00000381323 FAM83GA6ND36 823 aa10.9□□□□□ -0.66
FAM49A-201ENST00000381323 XRN1Q8IZH2 1706 aaKnown RBP10.9□□□□□ -0.66
FAM49A-201ENST00000381323 NBPF14Q5TI25 921 aa10.9□□□□□ -0.66
FAM49A-201ENST00000381323 KCNH5Q8NCM2 988 aa10.9□□□□□ -0.66
FAM49A-201ENST00000381323 NLRP2Q9NX02 1062 aa10.9□□□□□ -0.67
FAM49A-201ENST00000381323 PPP1R1BQ9UD71 204 aaPredicted RBP10.89□□□□□ -0.67
FAM49A-201ENST00000381323 CDC42BPGQ6DT37 1551 aa10.89□□□□□ -0.67
FAM49A-201ENST00000381323 LTV1Q96GA3 475 aaPredicted RBP10.88□□□□□ -0.67
FAM49A-201ENST00000381323 XIRP1Q702N8 1843 aaKnown RBP10.88□□□□□ -0.67
FAM49A-201ENST00000381323 GCP02774 474 aa10.88□□□□□ -0.67
FAM49A-201ENST00000381323 AMPHP49418 695 aa10.87□□□□□ -0.67
FAM49A-201ENST00000381323 NRXN3Q9Y4C0 1643 aa10.87□□□□□ -0.67
FAM49A-201ENST00000381323 APBA3O96018 575 aa10.87□□□□□ -0.67
FAM49A-201ENST00000381323 TMF1P82094 1093 aa10.87□□□□□ -0.67
FAM49A-201ENST00000381323 PRR36Q9H6K5 1346 aa10.87□□□□□ -0.67
FAM49A-201ENST00000381323 KIAA0232Q92628 1395 aa10.87□□□□□ -0.67
FAM49A-201ENST00000381323 PPIP5K1Q6PFW1 1433 aa10.87□□□□□ -0.67
FAM49A-201ENST00000381323 FAM196AQ6ZSG2 479 aa10.87□□□□□ -0.67
FAM49A-201ENST00000381323 FAM182BQ5T319 152 aa10.87□□□□□ -0.67
FAM49A-201ENST00000381323 TCP11L2Q8N4U5 519 aa10.87□□□□□ -0.67
FAM49A-201ENST00000381323 PPLO60437 1756 aa10.86□□□□□ -0.67
FAM49A-201ENST00000381323 DEFB132Q7Z7B7 95 aa10.86□□□□□ -0.67
FAM49A-201ENST00000381323 PPM1GO15355 546 aaPredicted RBP10.85□□□□□ -0.67
FAM49A-201ENST00000381323 DDB1Q16531 1140 aa10.85□□□□□ -0.67
FAM49A-201ENST00000381323 KTN1Q86UP2 1357 aaKnown RBP10.85□□□□□ -0.67
FAM49A-201ENST00000381323 PLEKHG3A1L390 1219 aa10.85□□□□□ -0.67
FAM49A-201ENST00000381323 COG3Q96JB2 828 aa10.85□□□□□ -0.67
FAM49A-201ENST00000381323 NALCNQ8IZF0 1738 aa10.84□□□□□ -0.67
FAM49A-201ENST00000381323 RGS12O14924 1447 aa10.84□□□□□ -0.67
FAM49A-201ENST00000381323 TRIM37O94972 964 aa10.84□□□□□ -0.67
FAM49A-201ENST00000381323 EXOC5O00471 708 aa10.84□□□□□ -0.67
FAM49A-201ENST00000381323 BCL11BQ9C0K0 894 aaPredicted RBP10.84□□□□□ -0.67
FAM49A-201ENST00000381323 LAMC1P11047 1609 aa10.84□□□□□ -0.67
FAM49A-201ENST00000381323 C11orf95C9JLR9 678 aaPredicted RBP10.83□□□□□ -0.68
FAM49A-201ENST00000381323 SYTL4Q96C24 671 aaPredicted RBP10.83□□□□□ -0.68
FAM49A-201ENST00000381323 PSDA5PKW4 1024 aaPredicted RBP10.83□□□□□ -0.68
FAM49A-201ENST00000381323 CDK12Q9NYV4 1490 aaPredicted RBP10.83□□□□□ -0.68
FAM49A-201ENST00000381323 NRXN1Q9ULB1 1477 aa10.83□□□□□ -0.68
FAM49A-201ENST00000381323 PRAG1Q86YV5 1406 aa10.82□□□□□ -0.68
FAM49A-201ENST00000381323 SHPRHQ149N8 1683 aa10.82□□□□□ -0.68
FAM49A-201ENST00000381323 EN1Q05925 392 aaPredicted RBP10.82□□□□□ -0.68
FAM49A-201ENST00000381323 LARP1Q6PKG0 1096 aaKnown RBP10.82□□□□□ -0.68
FAM49A-201ENST00000381323 TULP4Q9NRJ4 1543 aa10.82□□□□□ -0.68
FAM49A-201ENST00000381323 CNGB1Q14028 1251 aaPredicted RBP10.82□□□□□ -0.68
FAM49A-201ENST00000381323 DLC1Q96QB1 1528 aa10.81□□□□□ -0.68
FAM49A-201ENST00000381323 RALGAPBQ86X10 1494 aa10.81□□□□□ -0.68
FAM49A-201ENST00000381323 PXDNQ92626 1479 aa10.81□□□□□ -0.68
FAM49A-201ENST00000381323 CDCA7Q9BWT1 371 aaPredicted RBP10.81□□□□□ -0.68
FAM49A-201ENST00000381323 TTC21BQ7Z4L5 1316 aa10.81□□□□□ -0.68
FAM49A-201ENST00000381323 TTC21AQ8NDW8 1320 aa10.81□□□□□ -0.68
FAM49A-201ENST00000381323 ST20-MTHFSA0A0A6YYL1 179 aa10.81□□□□□ -0.68
FAM49A-201ENST00000381323 ATRNO75882 1429 aa10.81□□□□□ -0.68
FAM49A-201ENST00000381323 KLHL34Q8N239 644 aa10.8□□□□□ -0.68
FAM49A-201ENST00000381323 KIF1AQ12756 1690 aa10.8□□□□□ -0.68
FAM49A-201ENST00000381323 MSH5O43196 834 aa10.8□□□□□ -0.68
FAM49A-201ENST00000381323 SLC12A5Q9H2X9 1139 aa10.8□□□□□ -0.68
FAM49A-201ENST00000381323 SPATA31A5Q5VU36 1347 aa10.8□□□□□ -0.68
FAM49A-201ENST00000381323 SPATA31A7Q8IWB4 1347 aa10.8□□□□□ -0.68
FAM49A-201ENST00000381323 BLMP54132 1417 aaPredicted RBP10.79□□□□□ -0.68
FAM49A-201ENST00000381323 NHSL1Q5SYE7 1610 aa10.78□□□□□ -0.68
FAM49A-201ENST00000381323 DDX54Q8TDD1 881 aaKnown RBP10.78□□□□□ -0.68
FAM49A-201ENST00000381323 R3HDM1Q15032 1099 aaKnown RBP10.78□□□□□ -0.68
FAM49A-201ENST00000381323 THRAP3Q9Y2W1 955 aaKnown RBP10.78□□□□□ -0.68
FAM49A-201ENST00000381323 BRD4O60885 1362 aaPredicted RBP10.78□□□□□ -0.68
FAM49A-201ENST00000381323 BCL9LQ86UU0 1499 aa10.78□□□□□ -0.68
FAM49A-201ENST00000381323 RAPGEF4Q8WZA2 1011 aa10.78□□□□□ -0.68
FAM49A-201ENST00000381323 SPATA31A1Q5TZJ5 1347 aa10.77□□□□□ -0.68
FAM49A-201ENST00000381323 ZEB1P37275 1124 aaPredicted RBP10.77□□□□□ -0.69
FAM49A-201ENST00000381323 NME9Q86XW9 330 aa10.77□□□□□ -0.69
FAM49A-201ENST00000381323 ATP7BP35670 1465 aa10.76□□□□□ -0.69
FAM49A-201ENST00000381323 STK32BQ9NY57 414 aa10.76□□□□□ -0.69
FAM49A-201ENST00000381323 EIF4G2P78344 907 aaKnown RBP eCLIP10.75□□□□□ -0.69
FAM49A-201ENST00000381323 TNNT2P45379 298 aaPredicted RBP10.75□□□□□ -0.69
FAM49A-201ENST00000381323 ANKRD24Q8TF21 1146 aa10.74□□□□□ -0.69
FAM49A-201ENST00000381323 SETD1AO15047 1707 aaKnown RBP10.74□□□□□ -0.69
FAM49A-201ENST00000381323 ACSBG1Q96GR2 724 aa10.74□□□□□ -0.69
FAM49A-201ENST00000381323 SLIT2O94813 1529 aa10.74□□□□□ -0.69
FAM49A-201ENST00000381323 EZH2Q15910 746 aaKnown RBP10.73□□□□□ -0.69
FAM49A-201ENST00000381323 BARGINQ6ZT62 677 aa10.73□□□□□ -0.69
FAM49A-201ENST00000381323 PELP1Q8IZL8 1130 aaKnown RBP10.73□□□□□ -0.69
FAM49A-201ENST00000381323 FMN2Q9NZ56 1722 aa10.73□□□□□ -0.69
FAM49A-201ENST00000381323 IL2RBP14784 551 aa10.73□□□□□ -0.69
FAM49A-201ENST00000381323 GGNBP2Q9H3C7 697 aa10.73□□□□□ -0.69
FAM49A-201ENST00000381323 POLR3AO14802 1390 aaPredicted RBP10.73□□□□□ -0.69
FAM49A-201ENST00000381323 USP6P35125 1406 aa10.72□□□□□ -0.69
FAM49A-201ENST00000381323 SMG6Q86US8 1419 aaKnown RBP10.72□□□□□ -0.69
FAM49A-201ENST00000381323 TIMELESSQ9UNS1 1208 aa10.72□□□□□ -0.69
FAM49A-201ENST00000381323 WDR17Q8IZU2 1322 aa10.72□□□□□ -0.69
FAM49A-201ENST00000381323 SSH2Q76I76 1423 aa10.72□□□□□ -0.69
FAM49A-201ENST00000381323 ADGRB1O14514 1584 aa10.72□□□□□ -0.69
FAM49A-201ENST00000381323 TATP17735 454 aaPredicted RBP10.72□□□□□ -0.69
FAM49A-201ENST00000381323 KNDC1Q76NI1 1749 aa10.71□□□□□ -0.69
FAM49A-201ENST00000381323 KAT6BQ8WYB5 2073 aa10.71□□□□□ -0.69
FAM49A-201ENST00000381323 HMGB2P26583 209 aaKnown RBP10.71□□□□□ -0.69
FAM49A-201ENST00000381323 USP47Q96K76 1375 aa10.71□□□□□ -0.69
FAM49A-201ENST00000381323 USP32Q8NFA0 1604 aa10.71□□□□□ -0.7
FAM49A-201ENST00000381323 CARD10Q9BWT7 1032 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 238.9 ms