RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 DCTN1Q14203 1278 aa21.88■■□□□ 1.09
UBL3-201ENST00000380680 CHMP5Q9NZZ3 219 aa21.88■■□□□ 1.09
UBL3-201ENST00000380680 CARD14Q9BXL6 1004 aa21.88■■□□□ 1.09
UBL3-201ENST00000380680 MSH5O43196 834 aa21.87■■□□□ 1.09
UBL3-201ENST00000380680 ANO2Q9NQ90 1003 aa21.87■■□□□ 1.09
UBL3-201ENST00000380680 CCDC30Q5VVM6 783 aa21.86■■□□□ 1.09
UBL3-201ENST00000380680 DDX11L8A8MPP1 907 aa21.86■■□□□ 1.09
UBL3-201ENST00000380680 INTS3Q68E01 1043 aaKnown RBP21.86■■□□□ 1.09
UBL3-201ENST00000380680 UBTFL1P0CB47 393 aaPredicted RBP21.86■■□□□ 1.09
UBL3-201ENST00000380680 PROSER2Q86WR7 435 aaPredicted RBP21.86■■□□□ 1.09
UBL3-201ENST00000380680 GCC2Q8IWJ2 1684 aa21.85■■□□□ 1.09
UBL3-201ENST00000380680 AIMP1Q12904 312 aaKnown RBP21.85■■□□□ 1.09
UBL3-201ENST00000380680 ASXL1Q8IXJ9 1541 aa21.85■■□□□ 1.09
UBL3-201ENST00000380680 GCC1Q96CN9 775 aa21.85■■□□□ 1.09
UBL3-201ENST00000380680 LRPPRCP42704 1394 aaKnown RBP21.85■■□□□ 1.09
UBL3-201ENST00000380680 DDX58O95786 925 aaKnown RBP21.85■■□□□ 1.09
UBL3-201ENST00000380680 EVA1CP58658 441 aa21.84■■□□□ 1.09
UBL3-201ENST00000380680 ZNF428Q96B54 188 aa21.84■■□□□ 1.09
UBL3-201ENST00000380680 DIAPH3Q9NSV4 1193 aa21.84■■□□□ 1.09
UBL3-201ENST00000380680 ABCC10Q5T3U5 1492 aa21.84■■□□□ 1.09
UBL3-201ENST00000380680 CDC45O75419 566 aa21.84■■□□□ 1.09
UBL3-201ENST00000380680 FOXD4L6Q3SYB3 417 aaPredicted RBP21.84■■□□□ 1.09
UBL3-201ENST00000380680 FOXD4L3Q6VB84 417 aaPredicted RBP21.84■■□□□ 1.09
UBL3-201ENST00000380680 DDX49Q9Y6V7 483 aaKnown RBP21.84■■□□□ 1.09
UBL3-201ENST00000380680 FYB1O15117 783 aa21.83■■□□□ 1.09
UBL3-201ENST00000380680 GNAI3P08754 354 aa21.83■■□□□ 1.09
UBL3-201ENST00000380680 ANKLE2Q86XL3 938 aa21.83■■□□□ 1.08
UBL3-201ENST00000380680 SPATA31E1Q6ZUB1 1445 aa21.82■■□□□ 1.08
UBL3-201ENST00000380680 MBD5Q9P267 1494 aa21.82■■□□□ 1.08
UBL3-201ENST00000380680 HDGFL1Q5TGJ6 251 aa21.82■■□□□ 1.08
UBL3-201ENST00000380680 MCM10Q7L590 875 aa21.82■■□□□ 1.08
UBL3-201ENST00000380680 IFIT2P09913 472 aaKnown RBP21.81■■□□□ 1.08
UBL3-201ENST00000380680 PPP6R1Q9UPN7 881 aa21.81■■□□□ 1.08
UBL3-201ENST00000380680 MIS18AQ9NYP9 233 aa21.81■■□□□ 1.08
UBL3-201ENST00000380680 MSNP26038 577 aaKnown RBP21.81■■□□□ 1.08
UBL3-201ENST00000380680 AMOTL2Q9Y2J4 779 aa21.8■■□□□ 1.08
UBL3-201ENST00000380680 POGZQ7Z3K3 1410 aa21.8■■□□□ 1.08
UBL3-201ENST00000380680 NSD2O96028 1365 aa21.8■■□□□ 1.08
UBL3-201ENST00000380680 ABCC11Q96J66 1382 aa21.79■■□□□ 1.08
UBL3-201ENST00000380680 SURF6O75683 361 aaKnown RBP21.79■■□□□ 1.08
UBL3-201ENST00000380680 COL17A1Q9UMD9 1497 aaPredicted RBP21.79■■□□□ 1.08
UBL3-201ENST00000380680 PLEKHO1Q53GL0 409 aaPredicted RBP21.79■■□□□ 1.08
UBL3-201ENST00000380680 CHD1LQ86WJ1 897 aa21.78■■□□□ 1.08
UBL3-201ENST00000380680 G3BP1Q13283 466 aaKnown RBP eCLIP21.78■■□□□ 1.08
UBL3-201ENST00000380680 SYAP1Q96A49 352 aaPredicted RBP21.78■■□□□ 1.08
UBL3-201ENST00000380680 FRAT2O75474 233 aaPredicted RBP21.78■■□□□ 1.08
UBL3-201ENST00000380680 HSP90B1P14625 803 aaKnown RBP21.78■■□□□ 1.08
UBL3-201ENST00000380680 XPCQ01831 940 aaPredicted RBP21.78■■□□□ 1.08
UBL3-201ENST00000380680 ANKRD36BQ8N2N9 1353 aa21.78■■□□□ 1.08
UBL3-201ENST00000380680 TRIM27P14373 513 aa21.77■■□□□ 1.08
UBL3-201ENST00000380680 RIC3Q7Z5B4 369 aa21.77■■□□□ 1.08
UBL3-201ENST00000380680 EIF2AK4Q9P2K8 1649 aaKnown RBP21.77■■□□□ 1.08
UBL3-201ENST00000380680 PLEKHH1Q9ULM0 1364 aa21.77■■□□□ 1.08
UBL3-201ENST00000380680 GNAI2P04899 355 aa21.76■■□□□ 1.07
UBL3-201ENST00000380680 ZNF530Q6P9A1 599 aaPredicted RBP21.76■■□□□ 1.07
UBL3-201ENST00000380680 RUFY2Q8WXA3 655 aa21.76■■□□□ 1.07
UBL3-201ENST00000380680 HSP90AB4PQ58FF6 505 aa21.76■■□□□ 1.07
UBL3-201ENST00000380680 RBM33Q96EV2 1170 aaKnown RBP21.76■■□□□ 1.07
UBL3-201ENST00000380680 GLIPR1L2Q4G1C9 344 aa21.76■■□□□ 1.07
UBL3-201ENST00000380680 ABCA8O94911 1581 aa21.74■■□□□ 1.07
UBL3-201ENST00000380680 IFT57Q9NWB7 429 aa21.74■■□□□ 1.07
UBL3-201ENST00000380680 IGHDP01880 384 aa21.73■■□□□ 1.07
UBL3-201ENST00000380680 ALDH1L2Q3SY69 923 aa21.73■■□□□ 1.07
UBL3-201ENST00000380680 CCT4P50991 539 aaKnown RBP21.73■■□□□ 1.07
UBL3-201ENST00000380680 GNL2Q13823 731 aaKnown RBP21.72■■□□□ 1.07
UBL3-201ENST00000380680 POLR3AO14802 1390 aaPredicted RBP21.72■■□□□ 1.07
UBL3-201ENST00000380680 ZKSCAN1P17029 563 aaPredicted RBP21.72■■□□□ 1.07
UBL3-201ENST00000380680 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.71■■□□□ 1.07
UBL3-201ENST00000380680 SKOR2Q2VWA4 1001 aaPredicted RBP21.71■■□□□ 1.07
UBL3-201ENST00000380680 FAM83GA6ND36 823 aa21.7■■□□□ 1.06
UBL3-201ENST00000380680 CLASRPQ8N2M8 674 aaKnown RBP21.7■■□□□ 1.06
UBL3-201ENST00000380680 ATP7AQ04656 1500 aa21.7■■□□□ 1.06
UBL3-201ENST00000380680 SPINK5Q9NQ38 1064 aaPredicted RBP21.7■■□□□ 1.06
UBL3-201ENST00000380680 MAST1Q9Y2H9 1570 aa21.7■■□□□ 1.06
UBL3-201ENST00000380680 SYTL4Q96C24 671 aaPredicted RBP21.7■■□□□ 1.06
UBL3-201ENST00000380680 CFAP65Q6ZU64 1925 aaKnown RBP21.69■■□□□ 1.06
UBL3-201ENST00000380680 PIK3C2GO75747 1445 aa21.69■■□□□ 1.06
UBL3-201ENST00000380680 ACEP12821 1306 aa21.69■■□□□ 1.06
UBL3-201ENST00000380680 ERC2O15083 957 aa21.69■■□□□ 1.06
UBL3-201ENST00000380680 DRC7Q8IY82 874 aa21.69■■□□□ 1.06
UBL3-201ENST00000380680 ADGBQ8N7X0 1667 aa21.68■■□□□ 1.06
UBL3-201ENST00000380680 SRCIN1Q9C0H9 1055 aa21.68■■□□□ 1.06
UBL3-201ENST00000380680 ARHGEF5Q12774 1597 aa21.68■■□□□ 1.06
UBL3-201ENST00000380680 GNAT3A8MTJ3 354 aa21.67■■□□□ 1.06
UBL3-201ENST00000380680 HTATSF1O43719 755 aaKnown RBP21.67■■□□□ 1.06
UBL3-201ENST00000380680 RPAP2Q8IXW5 612 aaPredicted RBP21.67■■□□□ 1.06
UBL3-201ENST00000380680 PUS7Q96PZ0 661 aaKnown RBP21.67■■□□□ 1.06
UBL3-201ENST00000380680 ZC3H6P61129 1189 aaKnown RBP21.67■■□□□ 1.06
UBL3-201ENST00000380680 ZRANB1Q9UGI0 708 aa21.67■■□□□ 1.06
UBL3-201ENST00000380680 GTF2E1P29083 439 aaPredicted RBP21.66■■□□□ 1.06
UBL3-201ENST00000380680 NUCB2P80303 420 aa21.66■■□□□ 1.06
UBL3-201ENST00000380680 NEK4P51957 841 aa21.66■■□□□ 1.06
UBL3-201ENST00000380680 USHBP1Q8N6Y0 703 aa21.66■■□□□ 1.06
UBL3-201ENST00000380680 POLKQ9UBT6 870 aa21.66■■□□□ 1.06
UBL3-201ENST00000380680 PCDHB15Q9Y5E8 787 aa21.66■■□□□ 1.06
UBL3-201ENST00000380680 TNRQ92752 1358 aa21.65■■□□□ 1.06
UBL3-201ENST00000380680 FOXO3O43524 673 aa21.65■■□□□ 1.06
UBL3-201ENST00000380680 UHRF1BP1LA0JNW5 1464 aa21.64■■□□□ 1.06
UBL3-201ENST00000380680 HSP90AB2PQ58FF8 381 aa21.64■■□□□ 1.05
UBL3-201ENST00000380680 PHF8Q9UPP1 1060 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms