RNA–Protein interactions for RNA: ENST00000380221.7

TRAPPC10-202, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC10, Length 1,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-202ENST00000380221 NSD2O96028 1365 aa37.66■■■■□ 3.62
TRAPPC10-202ENST00000380221 FOXO3O43524 673 aa37.65■■■■□ 3.62
TRAPPC10-202ENST00000380221 YTHDC1Q96MU7 727 aaKnown RBP37.65■■■■□ 3.62
TRAPPC10-202ENST00000380221 NME9Q86XW9 330 aa37.63■■■■□ 3.61
TRAPPC10-202ENST00000380221 PSME1Q06323 249 aa37.63■■■■□ 3.61
TRAPPC10-202ENST00000380221 MORC1Q86VD1 984 aa37.61■■■■□ 3.61
TRAPPC10-202ENST00000380221 MYBBP1AQ9BQG0 1328 aaKnown RBP37.61■■■■□ 3.61
TRAPPC10-202ENST00000380221 ANKRD26Q9UPS8 1709 aa37.59■■■■□ 3.61
TRAPPC10-202ENST00000380221 BRINP3Q76B58 766 aa37.58■■■■□ 3.61
TRAPPC10-202ENST00000380221 XPCQ01831 940 aaPredicted RBP37.57■■■■□ 3.61
TRAPPC10-202ENST00000380221 ZRANB1Q9UGI0 708 aa37.57■■■■□ 3.61
TRAPPC10-202ENST00000380221 TTC21AQ8NDW8 1320 aa37.57■■■■□ 3.6
TRAPPC10-202ENST00000380221 CCDC184Q52MB2 194 aa37.55■■■■□ 3.6
TRAPPC10-202ENST00000380221 DDX17Q92841 729 aaKnown RBP37.55■■■■□ 3.6
TRAPPC10-202ENST00000380221 PAK3O75914 559 aaPredicted RBP37.55■■■■□ 3.6
TRAPPC10-202ENST00000380221 TNNT2P45379 298 aaPredicted RBP37.55■■■■□ 3.6
TRAPPC10-202ENST00000380221 PPP2R1AP30153 589 aa37.52■■■■□ 3.6
TRAPPC10-202ENST00000380221 KRT28Q7Z3Y7 464 aa37.52■■■■□ 3.6
TRAPPC10-202ENST00000380221 BRD4O60885 1362 aaPredicted RBP37.52■■■■□ 3.6
TRAPPC10-202ENST00000380221 PIK3C2AO00443 1686 aa37.5■■■■□ 3.59
TRAPPC10-202ENST00000380221 COG3Q96JB2 828 aa37.49■■■■□ 3.59
TRAPPC10-202ENST00000380221 NPHP3Q7Z494 1330 aa37.48■■■■□ 3.59
TRAPPC10-202ENST00000380221 NLRP13Q86W25 1043 aa37.48■■■■□ 3.59
TRAPPC10-202ENST00000380221 TRPM3Q9HCF6 1732 aaPredicted RBP37.47■■■■□ 3.59
TRAPPC10-202ENST00000380221 ABTB2Q8N961 1025 aa37.46■■■■□ 3.59
TRAPPC10-202ENST00000380221 MRS2Q9HD23 443 aa37.45■■■■□ 3.59
TRAPPC10-202ENST00000380221 OVOS2A0A0J9YW53 1432 aa37.45■■■■□ 3.59
TRAPPC10-202ENST00000380221 OVOS2Q6IE36 1432 aa37.45■■■■□ 3.59
TRAPPC10-202ENST00000380221 NUTM2GQ5VZR2 741 aa37.44■■■■□ 3.58
TRAPPC10-202ENST00000380221 NLRP6P59044 892 aa37.42■■■■□ 3.58
TRAPPC10-202ENST00000380221 PXDNQ92626 1479 aa37.42■■■■□ 3.58
TRAPPC10-202ENST00000380221 USP31Q70CQ4 1352 aa37.41■■■■□ 3.58
TRAPPC10-202ENST00000380221 CENPBP07199 599 aaPredicted RBP37.4■■■■□ 3.58
TRAPPC10-202ENST00000380221 FBLN1P23142 703 aa37.4■■■■□ 3.58
TRAPPC10-202ENST00000380221 ROBO1Q9Y6N7 1651 aa37.39■■■■□ 3.58
TRAPPC10-202ENST00000380221 CERKQ8TCT0 537 aa37.38■■■■□ 3.57
TRAPPC10-202ENST00000380221 TOM1O60784 492 aa37.37■■■■□ 3.57
TRAPPC10-202ENST00000380221 IQSEC2Q5JU85 1478 aa37.37■■■■□ 3.57
TRAPPC10-202ENST00000380221 MARF1Q9Y4F3 1742 aaKnown RBP37.37■■■■□ 3.57
TRAPPC10-202ENST00000380221 SCAF1Q9H7N4 1312 aaKnown RBP37.37■■■■□ 3.57
TRAPPC10-202ENST00000380221 LMOD2Q6P5Q4 547 aa37.36■■■■□ 3.57
TRAPPC10-202ENST00000380221 NHSL1Q5SYE7 1610 aa37.36■■■■□ 3.57
TRAPPC10-202ENST00000380221 SBNO1A3KN83 1393 aa37.35■■■■□ 3.57
TRAPPC10-202ENST00000380221 USP54Q70EL1 1684 aa37.35■■■■□ 3.57
TRAPPC10-202ENST00000380221 ALS2Q96Q42 1657 aa37.34■■■■□ 3.57
TRAPPC10-202ENST00000380221 SOS2Q07890 1332 aaPredicted RBP37.33■■■■□ 3.57
TRAPPC10-202ENST00000380221 MTHFSP49914 203 aa37.33■■■■□ 3.57
TRAPPC10-202ENST00000380221 UBAP1LF5GYI3 381 aa37.32■■■■□ 3.56
TRAPPC10-202ENST00000380221 SOX12O15370 315 aa37.31■■■■□ 3.56
TRAPPC10-202ENST00000380221 MAP2P11137 1827 aaKnown RBP37.31■■■■□ 3.56
TRAPPC10-202ENST00000380221 TNS3Q68CZ2 1445 aa37.3■■■■□ 3.56
TRAPPC10-202ENST00000380221 PIP4K2BP78356 416 aa37.29■■■■□ 3.56
TRAPPC10-202ENST00000380221 AATKQ6ZMQ8 1374 aa37.29■■■■□ 3.56
TRAPPC10-202ENST00000380221 SPATA31A3Q5VYP0 1347 aa37.28■■■■□ 3.56
TRAPPC10-202ENST00000380221 POLKQ9UBT6 870 aa37.28■■■■□ 3.56
TRAPPC10-202ENST00000380221 RRS1Q15050 365 aaKnown RBP37.27■■■■□ 3.56
TRAPPC10-202ENST00000380221 PLEKHG5O94827 1062 aa37.25■■■■□ 3.55
TRAPPC10-202ENST00000380221 EMILIN1Q9Y6C2 1016 aa37.24■■■■□ 3.55
TRAPPC10-202ENST00000380221 FAM9BQ8IZU0 186 aa37.24■■■■□ 3.55
TRAPPC10-202ENST00000380221 PNISRQ8TF01 805 aaKnown RBP37.24■■■■□ 3.55
TRAPPC10-202ENST00000380221 AHDC1Q5TGY3 1603 aaPredicted RBP37.22■■■■□ 3.55
TRAPPC10-202ENST00000380221 PPM1GO15355 546 aaPredicted RBP37.22■■■■□ 3.55
TRAPPC10-202ENST00000380221 ARHGEF10O15013 1369 aa37.19■■■■□ 3.54
TRAPPC10-202ENST00000380221 USP19O94966 1318 aa37.19■■■■□ 3.54
TRAPPC10-202ENST00000380221 SMG6Q86US8 1419 aaKnown RBP37.19■■■■□ 3.54
TRAPPC10-202ENST00000380221 CFAP53Q96M91 514 aa37.18■■■■□ 3.54
TRAPPC10-202ENST00000380221 MED1Q15648 1581 aaPredicted RBP37.17■■■■□ 3.54
TRAPPC10-202ENST00000380221 SLIT3O75094 1523 aa37.17■■■■□ 3.54
TRAPPC10-202ENST00000380221 GCP02774 474 aa37.15■■■■□ 3.54
TRAPPC10-202ENST00000380221 KCNH5Q8NCM2 988 aa37.15■■■■□ 3.54
TRAPPC10-202ENST00000380221 NFAT5O94916 1531 aa37.15■■■■□ 3.54
TRAPPC10-202ENST00000380221 MAP3K19Q56UN5 1328 aa37.15■■■■□ 3.54
TRAPPC10-202ENST00000380221 PNPLA6Q8IY17 1366 aa37.13■■■■□ 3.53
TRAPPC10-202ENST00000380221 PHLPP1O60346 1717 aa37.13■■■■□ 3.53
TRAPPC10-202ENST00000380221 PEAK1Q9H792 1746 aa37.13■■■■□ 3.53
TRAPPC10-202ENST00000380221 CABLES1Q8TDN4 633 aa37.12■■■■□ 3.53
TRAPPC10-202ENST00000380221 COL3A1P02461 1466 aaPredicted RBP37.11■■■■□ 3.53
TRAPPC10-202ENST00000380221 CDK12Q9NYV4 1490 aaPredicted RBP37.11■■■■□ 3.53
TRAPPC10-202ENST00000380221 LRRC59Q96AG4 307 aaKnown RBP37.1■■■■□ 3.53
TRAPPC10-202ENST00000380221 PHRF1Q9P1Y6 1649 aaKnown RBP37.1■■■■□ 3.53
TRAPPC10-202ENST00000380221 CRYBG1Q9Y4K1 1723 aa37.1■■■■□ 3.53
TRAPPC10-202ENST00000380221 SHPRHQ149N8 1683 aa37.09■■■■□ 3.53
TRAPPC10-202ENST00000380221 INSRP06213 1382 aa37.09■■■■□ 3.53
TRAPPC10-202ENST00000380221 LTN1O94822 1766 aa37.08■■■■□ 3.53
TRAPPC10-202ENST00000380221 WDR43Q15061 677 aaKnown RBP eCLIP37.07■■■■□ 3.53
TRAPPC10-202ENST00000380221 COL16A1Q07092 1604 aaPredicted RBP37.07■■■■□ 3.52
TRAPPC10-202ENST00000380221 AMPHP49418 695 aa37.06■■■■□ 3.52
TRAPPC10-202ENST00000380221 DIAPH1O60610 1272 aaKnown RBP37.04■■■■□ 3.52
TRAPPC10-202ENST00000380221 ADAMTS8Q9UP79 889 aa37.04■■■■□ 3.52
TRAPPC10-202ENST00000380221 ZBTB7CA1YPR0 619 aa37.03■■■■□ 3.52
TRAPPC10-202ENST00000380221 HSP90AB2PQ58FF8 381 aa37.03■■■■□ 3.52
TRAPPC10-202ENST00000380221 FLT4P35916 1363 aa37.03■■■■□ 3.52
TRAPPC10-202ENST00000380221 ZC3H6P61129 1189 aaKnown RBP37.01■■■■□ 3.52
TRAPPC10-202ENST00000380221 ARHGEF25Q86VW2 580 aa37.01■■■■□ 3.52
TRAPPC10-202ENST00000380221 KIF24Q5T7B8 1368 aa36.99■■■■□ 3.51
TRAPPC10-202ENST00000380221 HOXC9P31274 260 aa36.99■■■■□ 3.51
TRAPPC10-202ENST00000380221 ABCA3Q99758 1704 aa36.98■■■■□ 3.51
TRAPPC10-202ENST00000380221 NUDCQ9Y266 331 aa36.97■■■■□ 3.51
TRAPPC10-202ENST00000380221 U2SURPO15042 1029 aaKnown RBP36.96■■■■□ 3.51
TRAPPC10-202ENST00000380221 IL13P35225 146 aa36.96■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms