RNA–Protein interactions for RNA: ENST00000379893.5

DCLK1-204, Transcript of doublecortin like kinase 1, humanhuman

TSL 2 BASIC

Gene DCLK1, Length 4,612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-204ENST00000379893 CASC1Q6TDU7 716 aa6.56□□□□□ -1.36
DCLK1-204ENST00000379893 BCL2L13Q9BXK5 485 aa6.56□□□□□ -1.36
DCLK1-204ENST00000379893 PDCL3Q9H2J4 239 aa6.56□□□□□ -1.36
DCLK1-204ENST00000379893 ZNF408Q9H9D4 720 aa6.56□□□□□ -1.36
DCLK1-204ENST00000379893 CABP1Q9NZU7 370 aa6.56□□□□□ -1.36
DCLK1-204ENST00000379893 SPATA31A6Q5VVP1 1343 aa6.56□□□□□ -1.36
DCLK1-204ENST00000379893 PTMAP06454 111 aaKnown RBP6.56□□□□□ -1.36
DCLK1-204ENST00000379893 ZFYVE16Q7Z3T8 1539 aa6.55□□□□□ -1.36
DCLK1-204ENST00000379893 HSCBQ8IWL3 235 aa6.55□□□□□ -1.36
DCLK1-204ENST00000379893 SMARCC1Q92922 1105 aaPredicted RBP6.55□□□□□ -1.36
DCLK1-204ENST00000379893 STAC3Q96MF2 364 aa6.55□□□□□ -1.36
DCLK1-204ENST00000379893 CDK13Q14004 1512 aaKnown RBP6.55□□□□□ -1.36
DCLK1-204ENST00000379893 PTPRMP28827 1452 aa6.55□□□□□ -1.36
DCLK1-204ENST00000379893 CDCA7Q9BWT1 371 aaPredicted RBP6.55□□□□□ -1.36
DCLK1-204ENST00000379893 EAPPQ56P03 285 aaPredicted RBP6.55□□□□□ -1.36
DCLK1-204ENST00000379893 DEFB132Q7Z7B7 95 aa6.55□□□□□ -1.36
DCLK1-204ENST00000379893 UNC5CLQ8IV45 518 aa6.55□□□□□ -1.36
DCLK1-204ENST00000379893 STK31Q9BXU1 1019 aa6.55□□□□□ -1.36
DCLK1-204ENST00000379893 EIF2S2P20042 333 aaKnown RBP6.54□□□□□ -1.36
DCLK1-204ENST00000379893 TCP11L2Q8N4U5 519 aa6.54□□□□□ -1.36
DCLK1-204ENST00000379893 IL27Q8NEV9 243 aa6.54□□□□□ -1.36
DCLK1-204ENST00000379893 RRP7AQ9Y3A4 280 aaKnown RBP6.54□□□□□ -1.36
DCLK1-204ENST00000379893 HSP90B1P14625 803 aaKnown RBP6.54□□□□□ -1.36
DCLK1-204ENST00000379893 RRP1P56182 461 aaKnown RBP6.54□□□□□ -1.36
DCLK1-204ENST00000379893 SIN3AQ96ST3 1273 aa6.54□□□□□ -1.36
DCLK1-204ENST00000379893 CCNL1Q9UK58 526 aaPredicted RBP6.54□□□□□ -1.36
DCLK1-204ENST00000379893 GRIN3BO60391 1043 aa6.54□□□□□ -1.36
DCLK1-204ENST00000379893 FTSJ3Q8IY81 847 aaKnown RBP6.54□□□□□ -1.36
DCLK1-204ENST00000379893 EFCAB5A4FU69 1503 aa6.54□□□□□ -1.36
DCLK1-204ENST00000379893 ST20-MTHFSA0A0A6YYL1 179 aa6.54□□□□□ -1.36
DCLK1-204ENST00000379893 GIGYF1O75420 1035 aaPredicted RBP6.54□□□□□ -1.36
DCLK1-204ENST00000379893 MTHFSP49914 203 aa6.54□□□□□ -1.36
DCLK1-204ENST00000379893 HSPA5P11021 654 aaKnown RBP6.53□□□□□ -1.36
DCLK1-204ENST00000379893 LTKP29376 864 aa6.53□□□□□ -1.36
DCLK1-204ENST00000379893 SAMD1Q6SPF0 538 aaPredicted RBP6.53□□□□□ -1.36
DCLK1-204ENST00000379893 NOL10Q9BSC4 688 aaKnown RBP6.53□□□□□ -1.36
DCLK1-204ENST00000379893 BIN2Q9UBW5 565 aaPredicted RBP6.53□□□□□ -1.36
DCLK1-204ENST00000379893 CHD1O14646 1710 aa6.53□□□□□ -1.36
DCLK1-204ENST00000379893 STARD3NLO95772 234 aa6.53□□□□□ -1.36
DCLK1-204ENST00000379893 RBM5P52756 815 aaKnown RBP eCLIP6.53□□□□□ -1.36
DCLK1-204ENST00000379893 ZNF530Q6P9A1 599 aaPredicted RBP6.53□□□□□ -1.36
DCLK1-204ENST00000379893 BACH2Q9BYV9 841 aa6.53□□□□□ -1.36
DCLK1-204ENST00000379893 PRKRIP1Q9H875 184 aaPredicted RBP6.53□□□□□ -1.36
DCLK1-204ENST00000379893 MSL1Q68DK7 614 aa6.53□□□□□ -1.36
DCLK1-204ENST00000379893 KIF6Q6ZMV9 814 aa6.53□□□□□ -1.36
DCLK1-204ENST00000379893 GJD4Q96KN9 370 aaPredicted RBP6.53□□□□□ -1.36
DCLK1-204ENST00000379893 ZNF652Q9Y2D9 606 aa6.53□□□□□ -1.36
DCLK1-204ENST00000379893 RTCBQ9Y3I0 505 aaKnown RBP6.53□□□□□ -1.36
DCLK1-204ENST00000379893 PROM2Q8N271 834 aa6.53□□□□□ -1.36
DCLK1-204ENST00000379893 FRAT1Q92837 279 aaPredicted RBP6.53□□□□□ -1.36
DCLK1-204ENST00000379893 ARID3AQ99856 593 aa6.53□□□□□ -1.36
DCLK1-204ENST00000379893 NINLQ9Y2I6 1382 aa6.52□□□□□ -1.37
DCLK1-204ENST00000379893 RAD21O60216 631 aa6.52□□□□□ -1.37
DCLK1-204ENST00000379893 DNTTIP2Q5QJE6 756 aaKnown RBP6.52□□□□□ -1.37
DCLK1-204ENST00000379893 GGNBP2Q9H3C7 697 aa6.52□□□□□ -1.37
DCLK1-204ENST00000379893 CCDC141Q6ZP82 1450 aa6.52□□□□□ -1.37
DCLK1-204ENST00000379893 CASKIN1Q8WXD9 1431 aa6.52□□□□□ -1.37
DCLK1-204ENST00000379893 FAM83GA6ND36 823 aa6.52□□□□□ -1.37
DCLK1-204ENST00000379893 NF2P35240 595 aa6.52□□□□□ -1.37
DCLK1-204ENST00000379893 TERF1P54274 439 aa6.52□□□□□ -1.37
DCLK1-204ENST00000379893 RIMS2Q9UQ26 1411 aa6.52□□□□□ -1.37
DCLK1-204ENST00000379893 CUL7Q14999 1698 aa6.52□□□□□ -1.37
DCLK1-204ENST00000379893 NEXNQ0ZGT2 675 aa6.52□□□□□ -1.37
DCLK1-204ENST00000379893 FLAD1Q8NFF5 587 aa6.52□□□□□ -1.37
DCLK1-204ENST00000379893 ERBINQ96RT1 1412 aa6.52□□□□□ -1.37
DCLK1-204ENST00000379893 MYCNP04198 464 aaPredicted RBP6.51□□□□□ -1.37
DCLK1-204ENST00000379893 CALD1Q05682 793 aaKnown RBP6.51□□□□□ -1.37
DCLK1-204ENST00000379893 NCOA2Q15596 1464 aa6.51□□□□□ -1.37
DCLK1-204ENST00000379893 CGNL1Q0VF96 1302 aa6.51□□□□□ -1.37
DCLK1-204ENST00000379893 CLCN1P35523 988 aa6.51□□□□□ -1.37
DCLK1-204ENST00000379893 RBM10P98175 930 aaKnown RBP6.51□□□□□ -1.37
DCLK1-204ENST00000379893 RPGRQ92834 1020 aaKnown RBP6.51□□□□□ -1.37
DCLK1-204ENST00000379893 CCDC87Q9NVE4 849 aa6.51□□□□□ -1.37
DCLK1-204ENST00000379893 KIAA2012Q0VF49 1180 aa6.51□□□□□ -1.37
DCLK1-204ENST00000379893 SYAP1Q96A49 352 aaPredicted RBP6.51□□□□□ -1.37
DCLK1-204ENST00000379893 TSPYL1Q9H0U9 437 aa6.51□□□□□ -1.37
DCLK1-204ENST00000379893 GJA3Q9Y6H8 435 aa6.51□□□□□ -1.37
DCLK1-204ENST00000379893 KIF14Q15058 1648 aa6.51□□□□□ -1.37
DCLK1-204ENST00000379893 IL2RBP14784 551 aa6.51□□□□□ -1.37
DCLK1-204ENST00000379893 ATP6V1AP38606 617 aa6.51□□□□□ -1.37
DCLK1-204ENST00000379893 CCDC173Q0VFZ6 552 aa6.51□□□□□ -1.37
DCLK1-204ENST00000379893 ABT1Q9ULW3 272 aaKnown RBP6.51□□□□□ -1.37
DCLK1-204ENST00000379893 ADAMTS12P58397 1594 aa6.51□□□□□ -1.37
DCLK1-204ENST00000379893 CHMP5Q9NZZ3 219 aa6.5□□□□□ -1.37
DCLK1-204ENST00000379893 BRD4O60885 1362 aaPredicted RBP6.5□□□□□ -1.37
DCLK1-204ENST00000379893 USP47Q96K76 1375 aa6.5□□□□□ -1.37
DCLK1-204ENST00000379893 KRI1Q8N9T8 703 aaKnown RBP6.5□□□□□ -1.37
DCLK1-204ENST00000379893 FOXD4L1Q9NU39 408 aa6.5□□□□□ -1.37
DCLK1-204ENST00000379893 HDAC9Q9UKV0 1011 aa6.5□□□□□ -1.37
DCLK1-204ENST00000379893 FYCO1Q9BQS8 1478 aa6.5□□□□□ -1.37
DCLK1-204ENST00000379893 WASLO00401 505 aaPredicted RBP6.5□□□□□ -1.37
DCLK1-204ENST00000379893 TRAPPC3LQ5T215 181 aa6.5□□□□□ -1.37
DCLK1-204ENST00000379893 ZCRB1Q8TBF4 217 aaKnown RBP6.5□□□□□ -1.37
DCLK1-204ENST00000379893 MYBBP1AQ9BQG0 1328 aaKnown RBP6.5□□□□□ -1.37
DCLK1-204ENST00000379893 ANKRD30BQ9BXX2 1392 aa6.5□□□□□ -1.37
DCLK1-204ENST00000379893 HMGN5P82970 282 aaKnown RBP6.49□□□□□ -1.37
DCLK1-204ENST00000379893 AIMP1Q12904 312 aaKnown RBP6.49□□□□□ -1.37
DCLK1-204ENST00000379893 ROCK1Q13464 1354 aa6.49□□□□□ -1.37
DCLK1-204ENST00000379893 GNPATO15228 680 aa6.49□□□□□ -1.37
DCLK1-204ENST00000379893 NRDCO43847 1150 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms