RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 CCDC27Q2M243 656 aa13.17□□□□□ -0.3
USP6NL-202ENST00000379237 IBTKQ9P2D0 1353 aaPredicted RBP13.17□□□□□ -0.3
USP6NL-202ENST00000379237 PLEKHD1A6NEE1 506 aa13.16□□□□□ -0.3
USP6NL-202ENST00000379237 ZGPATQ8N5A5 531 aaKnown RBP13.16□□□□□ -0.3
USP6NL-202ENST00000379237 BLMP54132 1417 aaPredicted RBP13.16□□□□□ -0.3
USP6NL-202ENST00000379237 EXOSC9Q06265 439 aaKnown RBP13.16□□□□□ -0.3
USP6NL-202ENST00000379237 NOB1Q9ULX3 412 aaKnown RBP13.16□□□□□ -0.3
USP6NL-202ENST00000379237 CD2BP2O95400 341 aaKnown RBP13.16□□□□□ -0.3
USP6NL-202ENST00000379237 GOLGA6L19H0YKK7 550 aa13.16□□□□□ -0.3
USP6NL-202ENST00000379237 UVSSAQ2YD98 709 aa13.16□□□□□ -0.3
USP6NL-202ENST00000379237 GORABQ5T7V8 394 aa13.16□□□□□ -0.3
USP6NL-202ENST00000379237 ATF7IPQ6VMQ6 1270 aa13.16□□□□□ -0.3
USP6NL-202ENST00000379237 C10orf67Q8IYJ2 551 aa13.16□□□□□ -0.3
USP6NL-202ENST00000379237 ZNF710Q8N1W2 664 aa13.16□□□□□ -0.3
USP6NL-202ENST00000379237 CHAMP1Q96JM3 812 aa13.16□□□□□ -0.3
USP6NL-202ENST00000379237 ZNF692Q9BU19 519 aaPredicted RBP13.16□□□□□ -0.3
USP6NL-202ENST00000379237 PATL2C9JE40 543 aaKnown RBP13.15□□□□□ -0.3
USP6NL-202ENST00000379237 BMP2KLQ5H9B9 411 aa13.15□□□□□ -0.3
USP6NL-202ENST00000379237 ATP6V1DQ9Y5K8 247 aa13.15□□□□□ -0.3
USP6NL-202ENST00000379237 DMRT2Q9Y5R5 561 aa13.15□□□□□ -0.3
USP6NL-202ENST00000379237 TEX14Q8IWB6 1497 aa13.15□□□□□ -0.3
USP6NL-202ENST00000379237 KDM5BQ9UGL1 1544 aa13.15□□□□□ -0.3
USP6NL-202ENST00000379237 ELL2O00472 640 aaPredicted RBP13.15□□□□□ -0.3
USP6NL-202ENST00000379237 PKP1Q13835 747 aa13.15□□□□□ -0.3
USP6NL-202ENST00000379237 DEF6Q9H4E7 631 aa13.15□□□□□ -0.3
USP6NL-202ENST00000379237 TMEM57Q8N5G2 664 aa13.14□□□□□ -0.31
USP6NL-202ENST00000379237 GPT2Q8TD30 523 aa13.14□□□□□ -0.31
USP6NL-202ENST00000379237 TPM4P67936 248 aa13.14□□□□□ -0.31
USP6NL-202ENST00000379237 RSPH14Q9UHP6 348 aa13.14□□□□□ -0.31
USP6NL-202ENST00000379237 ATAD2BQ9ULI0 1458 aa13.14□□□□□ -0.31
USP6NL-202ENST00000379237 HOMER1Q86YM7 354 aa13.14□□□□□ -0.31
USP6NL-202ENST00000379237 CCDC144AA2RUR9 1427 aa13.14□□□□□ -0.31
USP6NL-202ENST00000379237 RASSF4Q9H2L5 321 aa13.14□□□□□ -0.31
USP6NL-202ENST00000379237 CCDC183Q5T5S1 534 aa13.13□□□□□ -0.31
USP6NL-202ENST00000379237 CCAR2Q8N163 923 aaKnown RBP13.13□□□□□ -0.31
USP6NL-202ENST00000379237 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.13□□□□□ -0.31
USP6NL-202ENST00000379237 MNS1Q8NEH6 495 aa13.13□□□□□ -0.31
USP6NL-202ENST00000379237 CCDC192P0DO97 292 aa13.12□□□□□ -0.31
USP6NL-202ENST00000379237 FKBP5Q13451 457 aaPredicted RBP13.12□□□□□ -0.31
USP6NL-202ENST00000379237 BECN2A8MW95 431 aa13.12□□□□□ -0.31
USP6NL-202ENST00000379237 GCC1Q96CN9 775 aa13.12□□□□□ -0.31
USP6NL-202ENST00000379237 ANO2Q9NQ90 1003 aa13.12□□□□□ -0.31
USP6NL-202ENST00000379237 ERBINQ96RT1 1412 aa13.11□□□□□ -0.31
USP6NL-202ENST00000379237 TRIM27P14373 513 aa13.11□□□□□ -0.31
USP6NL-202ENST00000379237 ZNF397Q8NF99 534 aaPredicted RBP13.11□□□□□ -0.31
USP6NL-202ENST00000379237 GTF3C6Q969F1 213 aa13.11□□□□□ -0.31
USP6NL-202ENST00000379237 HDAC1Q13547 482 aaPredicted RBP13.11□□□□□ -0.31
USP6NL-202ENST00000379237 BMS1Q14692 1282 aaKnown RBP13.11□□□□□ -0.31
USP6NL-202ENST00000379237 PTPN14Q15678 1187 aa13.11□□□□□ -0.31
USP6NL-202ENST00000379237 AK7Q96M32 723 aa13.11□□□□□ -0.31
USP6NL-202ENST00000379237 PAXBP1Q9Y5B6 917 aa13.11□□□□□ -0.31
USP6NL-202ENST00000379237 DISP3Q9P2K9 1392 aa13.11□□□□□ -0.31
USP6NL-202ENST00000379237 SMTNL1A8MU46 457 aa13.11□□□□□ -0.31
USP6NL-202ENST00000379237 LEKR1Q6ZMV7 388 aa13.11□□□□□ -0.31
USP6NL-202ENST00000379237 HDAC5Q9UQL6 1122 aa13.11□□□□□ -0.31
USP6NL-202ENST00000379237 VPS37CA5D8V6 355 aaPredicted RBP13.1□□□□□ -0.31
USP6NL-202ENST00000379237 WDR63Q8IWG1 891 aa13.1□□□□□ -0.31
USP6NL-202ENST00000379237 RILPL2Q969X0 211 aa13.1□□□□□ -0.31
USP6NL-202ENST00000379237 WDR33Q9C0J8 1336 aaKnown RBP13.1□□□□□ -0.31
USP6NL-202ENST00000379237 PTGS1P23219 599 aa13.1□□□□□ -0.31
USP6NL-202ENST00000379237 CEP135Q66GS9 1140 aa13.1□□□□□ -0.31
USP6NL-202ENST00000379237 CCDC186Q7Z3E2 898 aa13.1□□□□□ -0.31
USP6NL-202ENST00000379237 SECISBP2LQ93073 1101 aaKnown RBP13.1□□□□□ -0.31
USP6NL-202ENST00000379237 NUCB1Q02818 461 aa13.09□□□□□ -0.31
USP6NL-202ENST00000379237 TERF2Q15554 542 aa13.09□□□□□ -0.31
USP6NL-202ENST00000379237 SKIDA1Q1XH10 827 aa13.09□□□□□ -0.31
USP6NL-202ENST00000379237 GIMAP6Q6P9H5 292 aa13.09□□□□□ -0.31
USP6NL-202ENST00000379237 TRMT1Q9NXH9 659 aaKnown RBP13.09□□□□□ -0.31
USP6NL-202ENST00000379237 SUPT6HQ7KZ85 1726 aaKnown RBP13.09□□□□□ -0.31
USP6NL-202ENST00000379237 KDM4AO75164 1064 aa13.09□□□□□ -0.31
USP6NL-202ENST00000379237 RSPH4AQ5TD94 716 aa13.09□□□□□ -0.31
USP6NL-202ENST00000379237 TMCO3Q6UWJ1 677 aa13.09□□□□□ -0.31
USP6NL-202ENST00000379237 DHX37Q8IY37 1157 aaKnown RBP13.09□□□□□ -0.31
USP6NL-202ENST00000379237 SSH1Q8WYL5 1049 aa13.09□□□□□ -0.31
USP6NL-202ENST00000379237 MCM2P49736 904 aa13.08□□□□□ -0.32
USP6NL-202ENST00000379237 KLHL34Q8N239 644 aa13.08□□□□□ -0.32
USP6NL-202ENST00000379237 EHBP1L1Q8N3D4 1523 aa13.08□□□□□ -0.32
USP6NL-202ENST00000379237 CCDC191Q8NCU4 936 aa13.08□□□□□ -0.32
USP6NL-202ENST00000379237 CHMP4CQ96CF2 233 aa13.08□□□□□ -0.32
USP6NL-202ENST00000379237 SMC3Q9UQE7 1217 aa13.08□□□□□ -0.32
USP6NL-202ENST00000379237 FILIP1Q7Z7B0 1213 aa13.07□□□□□ -0.32
USP6NL-202ENST00000379237 DAPK1P53355 1430 aa13.07□□□□□ -0.32
USP6NL-202ENST00000379237 LMOD3Q0VAK6 560 aa13.07□□□□□ -0.32
USP6NL-202ENST00000379237 USP48Q86UV5 1035 aa13.07□□□□□ -0.32
USP6NL-202ENST00000379237 KIF18AQ8NI77 898 aa13.07□□□□□ -0.32
USP6NL-202ENST00000379237 BICRAQ9NZM4 1560 aa13.07□□□□□ -0.32
USP6NL-202ENST00000379237 BRD2P25440 801 aaKnown RBP13.07□□□□□ -0.32
USP6NL-202ENST00000379237 TEX2Q8IWB9 1127 aa13.07□□□□□ -0.32
USP6NL-202ENST00000379237 TXLNBQ8N3L3 684 aa13.07□□□□□ -0.32
USP6NL-202ENST00000379237 PYCARDQ9ULZ3 195 aa13.07□□□□□ -0.32
USP6NL-202ENST00000379237 NSFL1CQ9UNZ2 370 aaKnown RBP13.07□□□□□ -0.32
USP6NL-202ENST00000379237 RALGAPBQ86X10 1494 aa13.07□□□□□ -0.32
USP6NL-202ENST00000379237 KRBA2Q6ZNG9 492 aa13.06□□□□□ -0.32
USP6NL-202ENST00000379237 ANKRD50Q9ULJ7 1429 aa13.06□□□□□ -0.32
USP6NL-202ENST00000379237 CFAP43Q8NDM7 1665 aa13.06□□□□□ -0.32
USP6NL-202ENST00000379237 CAMK4Q16566 473 aa13.06□□□□□ -0.32
USP6NL-202ENST00000379237 UBXN4Q92575 508 aa13.06□□□□□ -0.32
USP6NL-202ENST00000379237 ZNF521Q96K83 1311 aa13.06□□□□□ -0.32
USP6NL-202ENST00000379237 HECW1Q76N89 1606 aa13.05□□□□□ -0.32
USP6NL-202ENST00000379237 SETQ01105 290 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms