RNA–Protein interactions for RNA: ENST00000378980.7

CNTFR-202, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-202ENST00000378980 MS4A1P11836 297 aa27.84■■■□□ 2.05
CNTFR-202ENST00000378980 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.84■■■□□ 2.05
CNTFR-202ENST00000378980 MYT1Q01538 1121 aa27.83■■■□□ 2.05
CNTFR-202ENST00000378980 C3P01024 1663 aa27.83■■■□□ 2.05
CNTFR-202ENST00000378980 MAP2P11137 1827 aaKnown RBP27.83■■■□□ 2.05
CNTFR-202ENST00000378980 AKAP12Q02952 1782 aa27.83■■■□□ 2.05
CNTFR-202ENST00000378980 PLEKHG1Q9ULL1 1385 aa27.82■■■□□ 2.04
CNTFR-202ENST00000378980 ITSN1Q15811 1721 aa27.82■■■□□ 2.04
CNTFR-202ENST00000378980 DIAPH1O60610 1272 aaKnown RBP27.82■■■□□ 2.04
CNTFR-202ENST00000378980 CENPQQ7L2Z9 268 aaPredicted RBP27.82■■■□□ 2.04
CNTFR-202ENST00000378980 PDE3AQ14432 1141 aa27.81■■■□□ 2.04
CNTFR-202ENST00000378980 NUDT16Q96DE0 195 aaKnown RBP27.8■■■□□ 2.04
CNTFR-202ENST00000378980 MYH16Q9H6N6 1097 aa27.8■■■□□ 2.04
CNTFR-202ENST00000378980 ROBO2Q9HCK4 1378 aa27.79■■■□□ 2.04
CNTFR-202ENST00000378980 RARSP54136 660 aaKnown RBP27.79■■■□□ 2.04
CNTFR-202ENST00000378980 FER1L4A9Z1Z3 1794 aa27.78■■■□□ 2.04
CNTFR-202ENST00000378980 MAPK8IP3Q9UPT6 1336 aa27.78■■■□□ 2.04
CNTFR-202ENST00000378980 TMPOP42166 694 aaKnown RBP27.78■■■□□ 2.04
CNTFR-202ENST00000378980 POLKQ9UBT6 870 aa27.77■■■□□ 2.04
CNTFR-202ENST00000378980 CCDC61Q9Y6R9 512 aa27.77■■■□□ 2.04
CNTFR-202ENST00000378980 LTKP29376 864 aa27.77■■■□□ 2.04
CNTFR-202ENST00000378980 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.76■■■□□ 2.03
CNTFR-202ENST00000378980 LRRC7Q96NW7 1537 aa27.76■■■□□ 2.03
CNTFR-202ENST00000378980 CEBPAP49715 358 aaPredicted RBP27.76■■■□□ 2.03
CNTFR-202ENST00000378980 CANXP27824 592 aaKnown RBP27.74■■■□□ 2.03
CNTFR-202ENST00000378980 PNNQ9H307 717 aaKnown RBP27.74■■■□□ 2.03
CNTFR-202ENST00000378980 TRIM35Q9UPQ4 493 aa27.74■■■□□ 2.03
CNTFR-202ENST00000378980 SLIT1O75093 1534 aa27.74■■■□□ 2.03
CNTFR-202ENST00000378980 PDE4AP27815 886 aa27.74■■■□□ 2.03
CNTFR-202ENST00000378980 TOPAZ1Q8N9V7 1692 aa27.73■■■□□ 2.03
CNTFR-202ENST00000378980 PRR36Q9H6K5 1346 aa27.72■■■□□ 2.03
CNTFR-202ENST00000378980 NCKAP5LQ9HCH0 1330 aa27.72■■■□□ 2.03
CNTFR-202ENST00000378980 NME9Q86XW9 330 aa27.72■■■□□ 2.03
CNTFR-202ENST00000378980 ARHGAP23Q9P227 1491 aa27.72■■■□□ 2.03
CNTFR-202ENST00000378980 SKAP1Q86WV1 359 aa27.72■■■□□ 2.03
CNTFR-202ENST00000378980 BACH2Q9BYV9 841 aa27.71■■■□□ 2.03
CNTFR-202ENST00000378980 CDK12Q9NYV4 1490 aaPredicted RBP27.71■■■□□ 2.03
CNTFR-202ENST00000378980 AATKQ6ZMQ8 1374 aa27.71■■■□□ 2.03
CNTFR-202ENST00000378980 FBLN1P23142 703 aa27.71■■■□□ 2.03
CNTFR-202ENST00000378980 FCHSD2O94868 740 aa27.7■■■□□ 2.02
CNTFR-202ENST00000378980 ANP32AP39687 249 aaKnown RBP27.7■■■□□ 2.02
CNTFR-202ENST00000378980 IL16Q14005 1332 aa27.7■■■□□ 2.02
CNTFR-202ENST00000378980 PANK1Q8TE04 598 aa27.69■■■□□ 2.02
CNTFR-202ENST00000378980 CT47B1P0C2W7 299 aaPredicted RBP27.69■■■□□ 2.02
CNTFR-202ENST00000378980 FRAT1Q92837 279 aaPredicted RBP27.69■■■□□ 2.02
CNTFR-202ENST00000378980 PPM1GO15355 546 aaPredicted RBP27.68■■■□□ 2.02
CNTFR-202ENST00000378980 NRKQ7Z2Y5 1582 aa27.68■■■□□ 2.02
CNTFR-202ENST00000378980 PTPRUQ92729 1446 aa27.68■■■□□ 2.02
CNTFR-202ENST00000378980 ZNF692Q9BU19 519 aaPredicted RBP27.68■■■□□ 2.02
CNTFR-202ENST00000378980 EID1Q9Y6B2 187 aa27.68■■■□□ 2.02
CNTFR-202ENST00000378980 RSPH6AQ9H0K4 717 aa27.67■■■□□ 2.02
CNTFR-202ENST00000378980 RIPK4P57078 832 aa27.66■■■□□ 2.02
CNTFR-202ENST00000378980 ERICH6Q7L0X2 663 aa27.66■■■□□ 2.02
CNTFR-202ENST00000378980 ZRANB1Q9UGI0 708 aa27.66■■■□□ 2.02
CNTFR-202ENST00000378980 COG6Q9Y2V7 657 aa27.66■■■□□ 2.02
CNTFR-202ENST00000378980 EMILIN1Q9Y6C2 1016 aa27.66■■■□□ 2.02
CNTFR-202ENST00000378980 TSR2Q969E8 191 aaKnown RBP27.66■■■□□ 2.02
CNTFR-202ENST00000378980 COG3Q96JB2 828 aa27.66■■■□□ 2.02
CNTFR-202ENST00000378980 CLUAP1Q96AJ1 413 aa27.64■■■□□ 2.02
CNTFR-202ENST00000378980 BCL2L13Q9BXK5 485 aa27.64■■■□□ 2.01
CNTFR-202ENST00000378980 PRKAR2BP31323 418 aa27.63■■■□□ 2.01
CNTFR-202ENST00000378980 SLC26A8Q96RN1 970 aa27.63■■■□□ 2.01
CNTFR-202ENST00000378980 DIP2AQ14689 1571 aa27.62■■■□□ 2.01
CNTFR-202ENST00000378980 IL13P35225 146 aa27.61■■■□□ 2.01
CNTFR-202ENST00000378980 AAMPQ13685 434 aa27.61■■■□□ 2.01
CNTFR-202ENST00000378980 IPO9Q96P70 1041 aaKnown RBP27.61■■■□□ 2.01
CNTFR-202ENST00000378980 EXOSC9Q06265 439 aaKnown RBP27.6■■■□□ 2.01
CNTFR-202ENST00000378980 PTCH1Q13635 1447 aa27.6■■■□□ 2.01
CNTFR-202ENST00000378980 RLBP1P12271 317 aa27.6■■■□□ 2.01
CNTFR-202ENST00000378980 TBX22Q9Y458 520 aa27.59■■■□□ 2.01
CNTFR-202ENST00000378980 PLEKHG3A1L390 1219 aa27.58■■■□□ 2.01
CNTFR-202ENST00000378980 NEFMP07197 916 aa27.58■■■□□ 2.01
CNTFR-202ENST00000378980 TNNQ9UQP3 1299 aa27.58■■■□□ 2.01
CNTFR-202ENST00000378980 NOP58Q9Y2X3 529 aaKnown RBP27.58■■■□□ 2.01
CNTFR-202ENST00000378980 IGHDP01880 384 aa27.57■■■□□ 2
CNTFR-202ENST00000378980 ACEP12821 1306 aa27.57■■■□□ 2
CNTFR-202ENST00000378980 PLPPR3Q6T4P5 718 aa27.56■■■□□ 2
CNTFR-202ENST00000378980 TTC21BQ7Z4L5 1316 aa27.56■■■□□ 2
CNTFR-202ENST00000378980 NALCNQ8IZF0 1738 aa27.56■■■□□ 2
CNTFR-202ENST00000378980 HMOX1P09601 288 aa27.56■■■□□ 2
CNTFR-202ENST00000378980 THEMISQ8N1K5 641 aaPredicted RBP27.56■■■□□ 2
CNTFR-202ENST00000378980 AMOTL2Q9Y2J4 779 aa27.56■■■□□ 2
CNTFR-202ENST00000378980 RRS1Q15050 365 aaKnown RBP27.55■■■□□ 2
CNTFR-202ENST00000378980 USP6P35125 1406 aa27.55■■■□□ 2
CNTFR-202ENST00000378980 NFE2L2Q16236 605 aa27.55■■■□□ 2
CNTFR-202ENST00000378980 OVOS2A0A0J9YW53 1432 aa27.54■■■□□ 2
CNTFR-202ENST00000378980 OVOS2Q6IE36 1432 aa27.54■■■□□ 2
CNTFR-202ENST00000378980 ZKSCAN2Q63HK3 967 aa27.54■■■□□ 2
CNTFR-202ENST00000378980 XRN1Q8IZH2 1706 aaKnown RBP27.54■■■□□ 2
CNTFR-202ENST00000378980 PHACTR3Q96KR7 559 aa27.53■■■□□ 2
CNTFR-202ENST00000378980 SMC4Q9NTJ3 1288 aa27.53■■■□□ 2
CNTFR-202ENST00000378980 DLG5Q8TDM6 1919 aa27.52■■■□□ 2
CNTFR-202ENST00000378980 SSH1Q8WYL5 1049 aa27.51■■□□□ 1.99
CNTFR-202ENST00000378980 NUTM2FA1L443 756 aa27.5■■□□□ 1.99
CNTFR-202ENST00000378980 NPM2Q86SE8 214 aaKnown RBP27.5■■□□□ 1.99
CNTFR-202ENST00000378980 MVPQ14764 893 aaKnown RBP27.5■■□□□ 1.99
CNTFR-202ENST00000378980 RIMS1Q86UR5 1692 aaKnown RBP27.49■■□□□ 1.99
CNTFR-202ENST00000378980 SSH2Q76I76 1423 aa27.49■■□□□ 1.99
CNTFR-202ENST00000378980 PAK3O75914 559 aaPredicted RBP27.48■■□□□ 1.99
CNTFR-202ENST00000378980 TRHP20396 242 aaPredicted RBP27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms