RNA–Protein interactions for RNA: ENST00000378540.8

PPM1B-203, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 2

Gene PPM1B, Length 1,703 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-203ENST00000378540 LRRC7Q96NW7 1537 aa31.23■■■□□ 2.59
PPM1B-203ENST00000378540 ZRANB1Q9UGI0 708 aa31.22■■■□□ 2.59
PPM1B-203ENST00000378540 MSH6P52701 1360 aa31.21■■■□□ 2.59
PPM1B-203ENST00000378540 ORAI2Q96SN7 254 aa31.21■■■□□ 2.59
PPM1B-203ENST00000378540 XIRP1Q702N8 1843 aaKnown RBP31.19■■■□□ 2.58
PPM1B-203ENST00000378540 NRKQ7Z2Y5 1582 aa31.19■■■□□ 2.58
PPM1B-203ENST00000378540 CADPS2Q86UW7 1296 aa31.18■■■□□ 2.58
PPM1B-203ENST00000378540 COG3Q96JB2 828 aa31.18■■■□□ 2.58
PPM1B-203ENST00000378540 DCCP43146 1447 aa31.18■■■□□ 2.58
PPM1B-203ENST00000378540 C1orf167Q5SNV9 1468 aa31.17■■■□□ 2.58
PPM1B-203ENST00000378540 CENPBP07199 599 aaPredicted RBP31.16■■■□□ 2.58
PPM1B-203ENST00000378540 SSH2Q76I76 1423 aa31.16■■■□□ 2.58
PPM1B-203ENST00000378540 MTHFSP49914 203 aa31.15■■■□□ 2.58
PPM1B-203ENST00000378540 TTC21AQ8NDW8 1320 aa31.15■■■□□ 2.58
PPM1B-203ENST00000378540 HNRNPUQ00839 825 aaKnown RBP eCLIP31.14■■■□□ 2.58
PPM1B-203ENST00000378540 PSME1Q06323 249 aa31.14■■■□□ 2.58
PPM1B-203ENST00000378540 MST1RQ04912 1400 aa31.14■■■□□ 2.57
PPM1B-203ENST00000378540 PAK3O75914 559 aaPredicted RBP31.12■■■□□ 2.57
PPM1B-203ENST00000378540 FOXO3O43524 673 aa31.1■■■□□ 2.57
PPM1B-203ENST00000378540 FBLN1P23142 703 aa31.1■■■□□ 2.57
PPM1B-203ENST00000378540 AEBP2Q6ZN18 517 aaPredicted RBP31.1■■■□□ 2.57
PPM1B-203ENST00000378540 WDR43Q15061 677 aaKnown RBP eCLIP31.09■■■□□ 2.57
PPM1B-203ENST00000378540 CFAP53Q96M91 514 aa31.08■■■□□ 2.57
PPM1B-203ENST00000378540 SCAF1Q9H7N4 1312 aaKnown RBP31.07■■■□□ 2.56
PPM1B-203ENST00000378540 XPCQ01831 940 aaPredicted RBP31.06■■■□□ 2.56
PPM1B-203ENST00000378540 NUTM2GQ5VZR2 741 aa31.04■■■□□ 2.56
PPM1B-203ENST00000378540 ABTB2Q8N961 1025 aa31.04■■■□□ 2.56
PPM1B-203ENST00000378540 KIF1AQ12756 1690 aa31.04■■■□□ 2.56
PPM1B-203ENST00000378540 ADAMTS8Q9UP79 889 aa31.04■■■□□ 2.56
PPM1B-203ENST00000378540 OVOS2A0A0J9YW53 1432 aa31.03■■■□□ 2.56
PPM1B-203ENST00000378540 OVOS2Q6IE36 1432 aa31.03■■■□□ 2.56
PPM1B-203ENST00000378540 PPM1GO15355 546 aaPredicted RBP31.03■■■□□ 2.56
PPM1B-203ENST00000378540 NLRP6P59044 892 aa31.03■■■□□ 2.56
PPM1B-203ENST00000378540 POLKQ9UBT6 870 aa31.02■■■□□ 2.56
PPM1B-203ENST00000378540 KRT28Q7Z3Y7 464 aa31.01■■■□□ 2.56
PPM1B-203ENST00000378540 PIK3C2AO00443 1686 aa31.01■■■□□ 2.56
PPM1B-203ENST00000378540 USP31Q70CQ4 1352 aa31■■■□□ 2.55
PPM1B-203ENST00000378540 SOX12O15370 315 aa31■■■□□ 2.55
PPM1B-203ENST00000378540 MAP2P11137 1827 aaKnown RBP30.99■■■□□ 2.55
PPM1B-203ENST00000378540 AATKQ6ZMQ8 1374 aa30.99■■■□□ 2.55
PPM1B-203ENST00000378540 SENP3-EIF4A1A0A087X0R7 540 aa30.99■■■□□ 2.55
PPM1B-203ENST00000378540 SLAIN2Q9P270 581 aa30.99■■■□□ 2.55
PPM1B-203ENST00000378540 RRS1Q15050 365 aaKnown RBP30.98■■■□□ 2.55
PPM1B-203ENST00000378540 EMILIN1Q9Y6C2 1016 aa30.98■■■□□ 2.55
PPM1B-203ENST00000378540 DDX17Q92841 729 aaKnown RBP30.97■■■□□ 2.55
PPM1B-203ENST00000378540 LMOD2Q6P5Q4 547 aa30.94■■■□□ 2.54
PPM1B-203ENST00000378540 BRINP3Q76B58 766 aa30.93■■■□□ 2.54
PPM1B-203ENST00000378540 LTBP4Q8N2S1 1624 aa30.93■■■□□ 2.54
PPM1B-203ENST00000378540 SHPRHQ149N8 1683 aa30.92■■■□□ 2.54
PPM1B-203ENST00000378540 NPHP3Q7Z494 1330 aa30.91■■■□□ 2.54
PPM1B-203ENST00000378540 INSRP06213 1382 aa30.9■■■□□ 2.54
PPM1B-203ENST00000378540 BLMP54132 1417 aaPredicted RBP30.9■■■□□ 2.54
PPM1B-203ENST00000378540 PNPLA6Q8IY17 1366 aa30.9■■■□□ 2.54
PPM1B-203ENST00000378540 DIAPH1O60610 1272 aaKnown RBP30.9■■■□□ 2.54
PPM1B-203ENST00000378540 NUDCQ9Y266 331 aa30.9■■■□□ 2.54
PPM1B-203ENST00000378540 COL3A1P02461 1466 aaPredicted RBP30.89■■■□□ 2.54
PPM1B-203ENST00000378540 TRPM3Q9HCF6 1732 aaPredicted RBP30.88■■■□□ 2.53
PPM1B-203ENST00000378540 PLEKHG5O94827 1062 aa30.88■■■□□ 2.53
PPM1B-203ENST00000378540 CCDC146Q8IYE0 955 aa30.88■■■□□ 2.53
PPM1B-203ENST00000378540 SMG6Q86US8 1419 aaKnown RBP30.88■■■□□ 2.53
PPM1B-203ENST00000378540 U2SURPO15042 1029 aaKnown RBP30.87■■■□□ 2.53
PPM1B-203ENST00000378540 MARF1Q9Y4F3 1742 aaKnown RBP30.87■■■□□ 2.53
PPM1B-203ENST00000378540 ZBED9Q6R2W3 1325 aa30.87■■■□□ 2.53
PPM1B-203ENST00000378540 USP54Q70EL1 1684 aa30.86■■■□□ 2.53
PPM1B-203ENST00000378540 U2AF1L5P0DN76 240 aaPredicted RBP30.86■■■□□ 2.53
PPM1B-203ENST00000378540 U2AF1Q01081 240 aaKnown RBP eCLIP30.86■■■□□ 2.53
PPM1B-203ENST00000378540 SALL2Q9Y467 1007 aaPredicted RBP30.85■■■□□ 2.53
PPM1B-203ENST00000378540 CDK12Q9NYV4 1490 aaPredicted RBP30.85■■■□□ 2.53
PPM1B-203ENST00000378540 MAP3K19Q56UN5 1328 aa30.83■■■□□ 2.53
PPM1B-203ENST00000378540 SBNO1A3KN83 1393 aa30.81■■■□□ 2.52
PPM1B-203ENST00000378540 AMPHP49418 695 aa30.81■■■□□ 2.52
PPM1B-203ENST00000378540 PXDNQ92626 1479 aa30.8■■■□□ 2.52
PPM1B-203ENST00000378540 PEAK1Q9H792 1746 aa30.78■■■□□ 2.52
PPM1B-203ENST00000378540 IL13P35225 146 aa30.78■■■□□ 2.52
PPM1B-203ENST00000378540 KCNH5Q8NCM2 988 aa30.78■■■□□ 2.52
PPM1B-203ENST00000378540 HSP90AB2PQ58FF8 381 aa30.77■■■□□ 2.52
PPM1B-203ENST00000378540 ALS2Q96Q42 1657 aa30.77■■■□□ 2.52
PPM1B-203ENST00000378540 TNS3Q68CZ2 1445 aa30.75■■■□□ 2.51
PPM1B-203ENST00000378540 ZBTB7CA1YPR0 619 aa30.75■■■□□ 2.51
PPM1B-203ENST00000378540 GCP02774 474 aa30.75■■■□□ 2.51
PPM1B-203ENST00000378540 RUNDC1Q96C34 613 aa30.75■■■□□ 2.51
PPM1B-203ENST00000378540 SPATA31A3Q5VYP0 1347 aa30.75■■■□□ 2.51
PPM1B-203ENST00000378540 APAF1O14727 1248 aa30.74■■■□□ 2.51
PPM1B-203ENST00000378540 FLT4P35916 1363 aa30.73■■■□□ 2.51
PPM1B-203ENST00000378540 EIF4A2Q14240 407 aaKnown RBP30.73■■■□□ 2.51
PPM1B-203ENST00000378540 USP19O94966 1318 aa30.73■■■□□ 2.51
PPM1B-203ENST00000378540 NFAT5O94916 1531 aa30.72■■■□□ 2.51
PPM1B-203ENST00000378540 SOS2Q07890 1332 aaPredicted RBP30.72■■■□□ 2.51
PPM1B-203ENST00000378540 SLIT3O75094 1523 aa30.71■■■□□ 2.51
PPM1B-203ENST00000378540 HOXC9P31274 260 aa30.7■■■□□ 2.5
PPM1B-203ENST00000378540 ARHGEF10O15013 1369 aa30.68■■■□□ 2.5
PPM1B-203ENST00000378540 HMOX1P09601 288 aa30.68■■■□□ 2.5
PPM1B-203ENST00000378540 LTN1O94822 1766 aa30.68■■■□□ 2.5
PPM1B-203ENST00000378540 KIF24Q5T7B8 1368 aa30.67■■■□□ 2.5
PPM1B-203ENST00000378540 CABLES1Q8TDN4 633 aa30.67■■■□□ 2.5
PPM1B-203ENST00000378540 PNNQ9H307 717 aaKnown RBP30.67■■■□□ 2.5
PPM1B-203ENST00000378540 FCHSD2O94868 740 aa30.66■■■□□ 2.5
PPM1B-203ENST00000378540 MED1Q15648 1581 aaPredicted RBP30.66■■■□□ 2.5
PPM1B-203ENST00000378540 TCP11L2Q8N4U5 519 aa30.66■■■□□ 2.5
PPM1B-203ENST00000378540 NHSL1Q5SYE7 1610 aa30.66■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms