RNA–Protein interactions for RNA: ENST00000377833.8

CUBN-202, Transcript of cubilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUBN, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-202ENST00000377833 CCDC66A2RUB6 948 aa7.21□□□□□ -1.25
CUBN-202ENST00000377833 ZNF396Q96N95 335 aaPredicted RBP7.21□□□□□ -1.25
CUBN-202ENST00000377833 TTC21BQ7Z4L5 1316 aa7.21□□□□□ -1.25
CUBN-202ENST00000377833 ZFYVE9O95405 1425 aa7.21□□□□□ -1.25
CUBN-202ENST00000377833 CCT4P50991 539 aaKnown RBP7.21□□□□□ -1.25
CUBN-202ENST00000377833 WASF1Q92558 559 aa7.21□□□□□ -1.25
CUBN-202ENST00000377833 WDR62O43379 1518 aa7.21□□□□□ -1.26
CUBN-202ENST00000377833 RTEL1-TNFRSF6BF6WH68 1400 aa7.21□□□□□ -1.26
CUBN-202ENST00000377833 STIM1Q13586 685 aa7.21□□□□□ -1.26
CUBN-202ENST00000377833 CWC22Q9HCG8 908 aaKnown RBP7.21□□□□□ -1.26
CUBN-202ENST00000377833 TBC1D2BQ9UPU7 963 aa7.21□□□□□ -1.26
CUBN-202ENST00000377833 ARHGEF5Q12774 1597 aa7.21□□□□□ -1.26
CUBN-202ENST00000377833 ZMYM4Q5VZL5 1548 aa7.21□□□□□ -1.26
CUBN-202ENST00000377833 ZSCAN25Q6NSZ9 544 aa7.21□□□□□ -1.26
CUBN-202ENST00000377833 PYM1Q9BRP8 204 aaKnown RBP7.21□□□□□ -1.26
CUBN-202ENST00000377833 BCL11BQ9C0K0 894 aaPredicted RBP7.21□□□□□ -1.26
CUBN-202ENST00000377833 AEBP1Q8IUX7 1158 aa7.21□□□□□ -1.26
CUBN-202ENST00000377833 SMARCE1Q969G3 411 aa7.21□□□□□ -1.26
CUBN-202ENST00000377833 PPIP5K1Q6PFW1 1433 aa7.2□□□□□ -1.26
CUBN-202ENST00000377833 RPRD2Q5VT52 1461 aaKnown RBP7.2□□□□□ -1.26
CUBN-202ENST00000377833 PAK3O75914 559 aaPredicted RBP7.2□□□□□ -1.26
CUBN-202ENST00000377833 MCM3P25205 808 aa7.2□□□□□ -1.26
CUBN-202ENST00000377833 KRT32Q14532 448 aa7.2□□□□□ -1.26
CUBN-202ENST00000377833 CDK13Q14004 1512 aaKnown RBP7.2□□□□□ -1.26
CUBN-202ENST00000377833 CNTROBQ8N137 903 aa7.2□□□□□ -1.26
CUBN-202ENST00000377833 CTDP1Q9Y5B0 961 aaPredicted RBP7.2□□□□□ -1.26
CUBN-202ENST00000377833 WDR7Q9Y4E6 1490 aa7.2□□□□□ -1.26
CUBN-202ENST00000377833 DDX12PQ92771 950 aa7.2□□□□□ -1.26
CUBN-202ENST00000377833 G3BP1Q13283 466 aaKnown RBP eCLIP7.2□□□□□ -1.26
CUBN-202ENST00000377833 CLUAP1Q96AJ1 413 aa7.2□□□□□ -1.26
CUBN-202ENST00000377833 PHAXQ9H814 394 aaKnown RBP7.2□□□□□ -1.26
CUBN-202ENST00000377833 SCAF11Q99590 1463 aaKnown RBP7.2□□□□□ -1.26
CUBN-202ENST00000377833 TUBB4BP68371 445 aa7.2□□□□□ -1.26
CUBN-202ENST00000377833 FRAT2O75474 233 aaPredicted RBP7.2□□□□□ -1.26
CUBN-202ENST00000377833 ERLIN1O75477 346 aa7.2□□□□□ -1.26
CUBN-202ENST00000377833 NACAP1Q9BZK3 213 aa7.2□□□□□ -1.26
CUBN-202ENST00000377833 MARCH6O60337 910 aa7.2□□□□□ -1.26
CUBN-202ENST00000377833 SOS1Q07889 1333 aaPredicted RBP7.19□□□□□ -1.26
CUBN-202ENST00000377833 TSPYL1Q9H0U9 437 aa7.19□□□□□ -1.26
CUBN-202ENST00000377833 CHMP3Q9Y3E7 222 aa7.19□□□□□ -1.26
CUBN-202ENST00000377833 KINO60870 393 aaKnown RBP7.19□□□□□ -1.26
CUBN-202ENST00000377833 INCENPQ9NQS7 918 aa7.19□□□□□ -1.26
CUBN-202ENST00000377833 CHMP5Q9NZZ3 219 aa7.19□□□□□ -1.26
CUBN-202ENST00000377833 ERLIN2O94905 339 aa7.19□□□□□ -1.26
CUBN-202ENST00000377833 PPP1R12BO60237 982 aaPredicted RBP7.19□□□□□ -1.26
CUBN-202ENST00000377833 GSE1Q14687 1217 aa7.19□□□□□ -1.26
CUBN-202ENST00000377833 CCDC30Q5VVM6 783 aa7.19□□□□□ -1.26
CUBN-202ENST00000377833 SAMD9Q5K651 1589 aa7.19□□□□□ -1.26
CUBN-202ENST00000377833 SIN3AQ96ST3 1273 aa7.19□□□□□ -1.26
CUBN-202ENST00000377833 RBM19Q9Y4C8 960 aaKnown RBP7.18□□□□□ -1.26
CUBN-202ENST00000377833 CROCC2H7BZ55 1655 aa7.18□□□□□ -1.26
CUBN-202ENST00000377833 OLFM4Q6UX06 510 aa7.18□□□□□ -1.26
CUBN-202ENST00000377833 ZMYM3Q14202 1370 aa7.18□□□□□ -1.26
CUBN-202ENST00000377833 CCDC191Q8NCU4 936 aa7.18□□□□□ -1.26
CUBN-202ENST00000377833 RAPGEF4Q8WZA2 1011 aa7.18□□□□□ -1.26
CUBN-202ENST00000377833 GOLGA6L10A6NI86 522 aa7.18□□□□□ -1.26
CUBN-202ENST00000377833 KIF20AO95235 890 aa7.18□□□□□ -1.26
CUBN-202ENST00000377833 THEMISQ8N1K5 641 aaPredicted RBP7.18□□□□□ -1.26
CUBN-202ENST00000377833 KANK4Q5T7N3 995 aaPredicted RBP7.18□□□□□ -1.26
CUBN-202ENST00000377833 FMNL3Q8IVF7 1028 aa7.18□□□□□ -1.26
CUBN-202ENST00000377833 ABCC10Q5T3U5 1492 aa7.18□□□□□ -1.26
CUBN-202ENST00000377833 ATF3P18847 181 aa7.18□□□□□ -1.26
CUBN-202ENST00000377833 MRE11P49959 708 aa7.18□□□□□ -1.26
CUBN-202ENST00000377833 TRIM22Q8IYM9 498 aa7.18□□□□□ -1.26
CUBN-202ENST00000377833 USP8P40818 1118 aa7.18□□□□□ -1.26
CUBN-202ENST00000377833 CBFA2T2O43439 604 aa7.17□□□□□ -1.26
CUBN-202ENST00000377833 LAMC1P11047 1609 aa7.17□□□□□ -1.26
CUBN-202ENST00000377833 TUBB4AP04350 444 aa7.17□□□□□ -1.26
CUBN-202ENST00000377833 R3HCC1Q9Y3T6 440 aaKnown RBP7.17□□□□□ -1.26
CUBN-202ENST00000377833 EPS15P42566 896 aa7.17□□□□□ -1.26
CUBN-202ENST00000377833 ZNHIT6Q9NWK9 470 aaKnown RBP7.17□□□□□ -1.26
CUBN-202ENST00000377833 CCDC146Q8IYE0 955 aa7.17□□□□□ -1.26
CUBN-202ENST00000377833 DEF6Q9H4E7 631 aa7.17□□□□□ -1.26
CUBN-202ENST00000377833 EZRP15311 586 aaKnown RBP7.17□□□□□ -1.26
CUBN-202ENST00000377833 ANKRD36BQ8N2N9 1353 aa7.17□□□□□ -1.26
CUBN-202ENST00000377833 ST20-MTHFSA0A0A6YYL1 179 aa7.17□□□□□ -1.26
CUBN-202ENST00000377833 KDM5DQ9BY66 1539 aa7.17□□□□□ -1.26
CUBN-202ENST00000377833 DDX49Q9Y6V7 483 aaKnown RBP7.17□□□□□ -1.26
CUBN-202ENST00000377833 WDR63Q8IWG1 891 aa7.17□□□□□ -1.26
CUBN-202ENST00000377833 PDCL2Q8N4E4 241 aa7.17□□□□□ -1.26
CUBN-202ENST00000377833 ASXL1Q8IXJ9 1541 aa7.16□□□□□ -1.26
CUBN-202ENST00000377833 ABCC2Q92887 1545 aa7.16□□□□□ -1.26
CUBN-202ENST00000377833 HMGB3O15347 200 aaKnown RBP7.16□□□□□ -1.26
CUBN-202ENST00000377833 TRPM2O94759 1503 aa7.16□□□□□ -1.26
CUBN-202ENST00000377833 TRHP20396 242 aaPredicted RBP7.16□□□□□ -1.26
CUBN-202ENST00000377833 SLKQ9H2G2 1235 aaPredicted RBP7.16□□□□□ -1.26
CUBN-202ENST00000377833 CTNNA3Q9UI47 895 aa7.16□□□□□ -1.26
CUBN-202ENST00000377833 POLR3GO15318 223 aaPredicted RBP7.16□□□□□ -1.26
CUBN-202ENST00000377833 ODF2Q5BJF6 829 aa7.16□□□□□ -1.26
CUBN-202ENST00000377833 CT47A1Q5JQC4 288 aaPredicted RBP7.16□□□□□ -1.26
CUBN-202ENST00000377833 UBTFL1P0CB47 393 aaPredicted RBP7.16□□□□□ -1.26
CUBN-202ENST00000377833 WWC2Q6AWC2 1192 aa7.16□□□□□ -1.26
CUBN-202ENST00000377833 CCDC171Q6TFL3 1326 aa7.16□□□□□ -1.26
CUBN-202ENST00000377833 IRX6P78412 446 aaPredicted RBP7.16□□□□□ -1.26
CUBN-202ENST00000377833 DEKP35659 375 aaKnown RBP7.15□□□□□ -1.26
CUBN-202ENST00000377833 RRP12Q5JTH9 1297 aaKnown RBP7.15□□□□□ -1.26
CUBN-202ENST00000377833 FAM107BQ9H098 131 aa7.15□□□□□ -1.26
CUBN-202ENST00000377833 TCOF1Q13428 1488 aaKnown RBP7.15□□□□□ -1.26
CUBN-202ENST00000377833 KIF6Q6ZMV9 814 aa7.15□□□□□ -1.26
CUBN-202ENST00000377833 KRI1Q8N9T8 703 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms