RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 PANK1Q8TE04 598 aa22.04■■□□□ 1.12
TRIM27-201ENST00000377194 U2SURPO15042 1029 aaKnown RBP22.04■■□□□ 1.12
TRIM27-201ENST00000377194 RARSP54136 660 aaKnown RBP22.04■■□□□ 1.12
TRIM27-201ENST00000377194 PDE3AQ14432 1141 aa22.03■■□□□ 1.12
TRIM27-201ENST00000377194 PLEKHF1Q96S99 279 aa22.03■■□□□ 1.12
TRIM27-201ENST00000377194 RSPH6AQ9H0K4 717 aa22.03■■□□□ 1.12
TRIM27-201ENST00000377194 HDGFL2Q7Z4V5 671 aaPredicted RBP22.03■■□□□ 1.12
TRIM27-201ENST00000377194 COL3A1P02461 1466 aaPredicted RBP22.02■■□□□ 1.12
TRIM27-201ENST00000377194 FBLN1P23142 703 aa22.02■■□□□ 1.11
TRIM27-201ENST00000377194 COG6Q9Y2V7 657 aa22.02■■□□□ 1.11
TRIM27-201ENST00000377194 BCL2L13Q9BXK5 485 aa22.01■■□□□ 1.11
TRIM27-201ENST00000377194 ZMYM3Q14202 1370 aa22.01■■□□□ 1.11
TRIM27-201ENST00000377194 FAM43AQ8N2R8 423 aa22■■□□□ 1.11
TRIM27-201ENST00000377194 MED14O60244 1454 aa22■■□□□ 1.11
TRIM27-201ENST00000377194 IGHDP01880 384 aa22■■□□□ 1.11
TRIM27-201ENST00000377194 CANXP27824 592 aaKnown RBP22■■□□□ 1.11
TRIM27-201ENST00000377194 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22■■□□□ 1.11
TRIM27-201ENST00000377194 TNNQ9UQP3 1299 aa22■■□□□ 1.11
TRIM27-201ENST00000377194 SETD1AO15047 1707 aaKnown RBP21.99■■□□□ 1.11
TRIM27-201ENST00000377194 METP08581 1390 aa21.98■■□□□ 1.11
TRIM27-201ENST00000377194 ADGRB2O60241 1585 aa21.98■■□□□ 1.11
TRIM27-201ENST00000377194 NCBP3Q53F19 620 aaKnown RBP21.98■■□□□ 1.11
TRIM27-201ENST00000377194 DLC1Q96QB1 1528 aa21.97■■□□□ 1.11
TRIM27-201ENST00000377194 RLBP1P12271 317 aa21.97■■□□□ 1.11
TRIM27-201ENST00000377194 TMPOP42166 694 aaKnown RBP21.97■■□□□ 1.11
TRIM27-201ENST00000377194 FAM161AQ3B820 660 aa21.97■■□□□ 1.11
TRIM27-201ENST00000377194 C8orf34Q49A92 452 aa21.97■■□□□ 1.11
TRIM27-201ENST00000377194 KIF13AQ9H1H9 1805 aa21.97■■□□□ 1.11
TRIM27-201ENST00000377194 TRIM35Q9UPQ4 493 aa21.96■■□□□ 1.11
TRIM27-201ENST00000377194 ANKRD26Q9UPS8 1709 aa21.96■■□□□ 1.11
TRIM27-201ENST00000377194 TXNDC2Q86VQ3 553 aa21.96■■□□□ 1.11
TRIM27-201ENST00000377194 RGS3P49796 1198 aa21.95■■□□□ 1.1
TRIM27-201ENST00000377194 TSR2Q969E8 191 aaKnown RBP21.95■■□□□ 1.1
TRIM27-201ENST00000377194 ESF1Q9H501 851 aaKnown RBP21.95■■□□□ 1.1
TRIM27-201ENST00000377194 PNPLA6Q8IY17 1366 aa21.95■■□□□ 1.1
TRIM27-201ENST00000377194 NRXN3Q9Y4C0 1643 aa21.95■■□□□ 1.1
TRIM27-201ENST00000377194 CLUAP1Q96AJ1 413 aa21.95■■□□□ 1.1
TRIM27-201ENST00000377194 MYH16Q9H6N6 1097 aa21.95■■□□□ 1.1
TRIM27-201ENST00000377194 DIAPH1O60610 1272 aaKnown RBP21.94■■□□□ 1.1
TRIM27-201ENST00000377194 PKNOX2Q96KN3 472 aa21.93■■□□□ 1.1
TRIM27-201ENST00000377194 NCKAP5LQ9HCH0 1330 aa21.92■■□□□ 1.1
TRIM27-201ENST00000377194 WASLO00401 505 aaPredicted RBP21.92■■□□□ 1.1
TRIM27-201ENST00000377194 POLKQ9UBT6 870 aa21.92■■□□□ 1.1
TRIM27-201ENST00000377194 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.91■■□□□ 1.1
TRIM27-201ENST00000377194 MAPK8IP3Q9UPT6 1336 aa21.91■■□□□ 1.1
TRIM27-201ENST00000377194 RRAGDQ9NQL2 400 aaPredicted RBP21.9■■□□□ 1.1
TRIM27-201ENST00000377194 ATP7BP35670 1465 aa21.89■■□□□ 1.1
TRIM27-201ENST00000377194 RIPK4P57078 832 aa21.89■■□□□ 1.1
TRIM27-201ENST00000377194 ARXQ96QS3 562 aa21.89■■□□□ 1.1
TRIM27-201ENST00000377194 KIF20BQ96Q89 1820 aa21.89■■□□□ 1.09
TRIM27-201ENST00000377194 EXOSC9Q06265 439 aaKnown RBP21.89■■□□□ 1.09
TRIM27-201ENST00000377194 ZRANB1Q9UGI0 708 aa21.88■■□□□ 1.09
TRIM27-201ENST00000377194 CPSF1Q10570 1443 aaKnown RBP21.87■■□□□ 1.09
TRIM27-201ENST00000377194 NME9Q86XW9 330 aa21.87■■□□□ 1.09
TRIM27-201ENST00000377194 PCDHB15Q9Y5E8 787 aa21.87■■□□□ 1.09
TRIM27-201ENST00000377194 PPIP5K1Q6PFW1 1433 aa21.87■■□□□ 1.09
TRIM27-201ENST00000377194 NUDT16Q96DE0 195 aaKnown RBP21.86■■□□□ 1.09
TRIM27-201ENST00000377194 TNRQ92752 1358 aa21.86■■□□□ 1.09
TRIM27-201ENST00000377194 EMILIN1Q9Y6C2 1016 aa21.85■■□□□ 1.09
TRIM27-201ENST00000377194 FCHSD2O94868 740 aa21.84■■□□□ 1.09
TRIM27-201ENST00000377194 PRKAR2BP31323 418 aa21.83■■□□□ 1.09
TRIM27-201ENST00000377194 CCDC61Q9Y6R9 512 aa21.83■■□□□ 1.08
TRIM27-201ENST00000377194 TMEM2Q9UHN6 1383 aa21.82■■□□□ 1.08
TRIM27-201ENST00000377194 MAP2P11137 1827 aaKnown RBP21.82■■□□□ 1.08
TRIM27-201ENST00000377194 HDGFP51858 240 aaKnown RBP21.82■■□□□ 1.08
TRIM27-201ENST00000377194 SSH1Q8WYL5 1049 aa21.82■■□□□ 1.08
TRIM27-201ENST00000377194 EDC4Q6P2E9 1401 aaKnown RBP21.82■■□□□ 1.08
TRIM27-201ENST00000377194 HMOX1P09601 288 aa21.82■■□□□ 1.08
TRIM27-201ENST00000377194 PHACTR3Q96KR7 559 aa21.82■■□□□ 1.08
TRIM27-201ENST00000377194 CT47B1P0C2W7 299 aaPredicted RBP21.81■■□□□ 1.08
TRIM27-201ENST00000377194 ZKSCAN2Q63HK3 967 aa21.81■■□□□ 1.08
TRIM27-201ENST00000377194 SMC4Q9NTJ3 1288 aa21.81■■□□□ 1.08
TRIM27-201ENST00000377194 LRRC7Q96NW7 1537 aa21.81■■□□□ 1.08
TRIM27-201ENST00000377194 TECPR2O15040 1411 aa21.81■■□□□ 1.08
TRIM27-201ENST00000377194 FAM135BQ49AJ0 1406 aa21.81■■□□□ 1.08
TRIM27-201ENST00000377194 IL16Q14005 1332 aa21.8■■□□□ 1.08
TRIM27-201ENST00000377194 PRR36Q9H6K5 1346 aa21.8■■□□□ 1.08
TRIM27-201ENST00000377194 SIRT1Q96EB6 747 aa21.8■■□□□ 1.08
TRIM27-201ENST00000377194 PNNQ9H307 717 aaKnown RBP21.8■■□□□ 1.08
TRIM27-201ENST00000377194 ROBO2Q9HCK4 1378 aa21.79■■□□□ 1.08
TRIM27-201ENST00000377194 LTKP29376 864 aa21.79■■□□□ 1.08
TRIM27-201ENST00000377194 CEBPAP49715 358 aaPredicted RBP21.79■■□□□ 1.08
TRIM27-201ENST00000377194 MVPQ14764 893 aaKnown RBP21.79■■□□□ 1.08
TRIM27-201ENST00000377194 CPS1P31327 1500 aa21.79■■□□□ 1.08
TRIM27-201ENST00000377194 CDC42BPGQ6DT37 1551 aa21.79■■□□□ 1.08
TRIM27-201ENST00000377194 TRIM27P14373 513 aa21.78■■□□□ 1.08
TRIM27-201ENST00000377194 DZIP1LQ8IYY4 767 aaKnown RBP21.78■■□□□ 1.08
TRIM27-201ENST00000377194 IL13P35225 146 aa21.77■■□□□ 1.08
TRIM27-201ENST00000377194 AAMPQ13685 434 aa21.77■■□□□ 1.08
TRIM27-201ENST00000377194 RRS1Q15050 365 aaKnown RBP21.77■■□□□ 1.08
TRIM27-201ENST00000377194 PMFBP1Q8TBY8 1022 aa21.77■■□□□ 1.08
TRIM27-201ENST00000377194 SLKQ9H2G2 1235 aaPredicted RBP21.77■■□□□ 1.08
TRIM27-201ENST00000377194 ADAMTS13Q76LX8 1427 aa21.77■■□□□ 1.08
TRIM27-201ENST00000377194 UBR1Q8IWV7 1749 aa21.77■■□□□ 1.08
TRIM27-201ENST00000377194 VSIG10Q8N0Z9 540 aa21.77■■□□□ 1.08
TRIM27-201ENST00000377194 FTSJ3Q8IY81 847 aaKnown RBP21.76■■□□□ 1.07
TRIM27-201ENST00000377194 THUMPD2Q9BTF0 503 aaKnown RBP21.75■■□□□ 1.07
TRIM27-201ENST00000377194 NOB1Q9ULX3 412 aaKnown RBP21.75■■□□□ 1.07
TRIM27-201ENST00000377194 KNDC1Q76NI1 1749 aa21.75■■□□□ 1.07
TRIM27-201ENST00000377194 COG3Q96JB2 828 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms