RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 SBNO2Q9Y2G9 1366 aa16.33■□□□□ 0.2
USP11-204ENST00000377107 YEATS2Q9ULM3 1422 aa16.33■□□□□ 0.2
USP11-204ENST00000377107 MROH2AA6NES4 1674 aa16.32■□□□□ 0.2
USP11-204ENST00000377107 C22orf23Q9BZE7 217 aa16.32■□□□□ 0.2
USP11-204ENST00000377107 USP19O94966 1318 aa16.31■□□□□ 0.2
USP11-204ENST00000377107 FAM83GA6ND36 823 aa16.31■□□□□ 0.2
USP11-204ENST00000377107 KIDINS220Q9ULH0 1771 aa16.31■□□□□ 0.2
USP11-204ENST00000377107 TBC1D2Q9BYX2 928 aa16.31■□□□□ 0.2
USP11-204ENST00000377107 PNNQ9H307 717 aaKnown RBP16.3■□□□□ 0.2
USP11-204ENST00000377107 TSPYL6Q8N831 410 aa16.3■□□□□ 0.2
USP11-204ENST00000377107 CCDC27Q2M243 656 aa16.29■□□□□ 0.2
USP11-204ENST00000377107 ABCA9Q8IUA7 1624 aa16.29■□□□□ 0.2
USP11-204ENST00000377107 MROH1Q8NDA8 1641 aa16.29■□□□□ 0.2
USP11-204ENST00000377107 ARAP3Q8WWN8 1544 aa16.29■□□□□ 0.2
USP11-204ENST00000377107 NINLQ9Y2I6 1382 aa16.29■□□□□ 0.2
USP11-204ENST00000377107 EIF5BO60841 1220 aaKnown RBP16.29■□□□□ 0.2
USP11-204ENST00000377107 PLEKHF1Q96S99 279 aa16.28■□□□□ 0.2
USP11-204ENST00000377107 POLKQ9UBT6 870 aa16.28■□□□□ 0.2
USP11-204ENST00000377107 ATAD2Q6PL18 1390 aa16.27■□□□□ 0.2
USP11-204ENST00000377107 DEPDC5O75140 1603 aa16.27■□□□□ 0.2
USP11-204ENST00000377107 COG3Q96JB2 828 aa16.27■□□□□ 0.2
USP11-204ENST00000377107 VWDEQ8N2E2 1590 aa16.27■□□□□ 0.19
USP11-204ENST00000377107 PHF23Q9BUL5 403 aaPredicted RBP16.27■□□□□ 0.19
USP11-204ENST00000377107 HSCBQ8IWL3 235 aa16.26■□□□□ 0.19
USP11-204ENST00000377107 TBC1D32Q96NH3 1257 aa16.26■□□□□ 0.19
USP11-204ENST00000377107 ADGRB3O60242 1522 aa16.26■□□□□ 0.19
USP11-204ENST00000377107 KIF16BQ96L93 1317 aa16.25■□□□□ 0.19
USP11-204ENST00000377107 ABCC3O15438 1527 aa16.25■□□□□ 0.19
USP11-204ENST00000377107 FCHSD2O94868 740 aa16.24■□□□□ 0.19
USP11-204ENST00000377107 HSP90AB1P08238 724 aaKnown RBP16.24■□□□□ 0.19
USP11-204ENST00000377107 QRICH2Q9H0J4 1663 aa16.24■□□□□ 0.19
USP11-204ENST00000377107 ANO8Q9HCE9 1232 aaPredicted RBP16.24■□□□□ 0.19
USP11-204ENST00000377107 KRT24Q2M2I5 525 aa16.24■□□□□ 0.19
USP11-204ENST00000377107 YTHDC2Q9H6S0 1430 aaKnown RBP16.24■□□□□ 0.19
USP11-204ENST00000377107 TWISTNBQ3B726 338 aaPredicted RBP16.23■□□□□ 0.19
USP11-204ENST00000377107 MIS18AQ9NYP9 233 aa16.23■□□□□ 0.19
USP11-204ENST00000377107 ABCC11Q96J66 1382 aa16.23■□□□□ 0.19
USP11-204ENST00000377107 ZBTB7CA1YPR0 619 aa16.23■□□□□ 0.19
USP11-204ENST00000377107 C14orf37Q86TY3 774 aa16.23■□□□□ 0.19
USP11-204ENST00000377107 NSD2O96028 1365 aa16.23■□□□□ 0.19
USP11-204ENST00000377107 TULP4Q9NRJ4 1543 aa16.22■□□□□ 0.19
USP11-204ENST00000377107 MLH3Q9UHC1 1453 aa16.22■□□□□ 0.19
USP11-204ENST00000377107 NFE2L2Q16236 605 aa16.22■□□□□ 0.19
USP11-204ENST00000377107 SLC4A10Q6U841 1118 aa16.22■□□□□ 0.19
USP11-204ENST00000377107 NUDT16Q96DE0 195 aaKnown RBP16.22■□□□□ 0.19
USP11-204ENST00000377107 SULT6B1Q6IMI4 303 aa16.22■□□□□ 0.19
USP11-204ENST00000377107 NECTIN2Q92692 538 aa16.22■□□□□ 0.19
USP11-204ENST00000377107 ADGRB1O14514 1584 aa16.21■□□□□ 0.19
USP11-204ENST00000377107 MBIPQ9NS73 344 aa16.21■□□□□ 0.19
USP11-204ENST00000377107 AAMPQ13685 434 aa16.21■□□□□ 0.19
USP11-204ENST00000377107 CHD1LQ86WJ1 897 aa16.21■□□□□ 0.19
USP11-204ENST00000377107 AEBP1Q8IUX7 1158 aa16.21■□□□□ 0.19
USP11-204ENST00000377107 GLI2P10070 1586 aa16.21■□□□□ 0.18
USP11-204ENST00000377107 NRXN1Q9ULB1 1477 aa16.21■□□□□ 0.18
USP11-204ENST00000377107 MCM10Q7L590 875 aa16.2■□□□□ 0.18
USP11-204ENST00000377107 C8orf58Q8NAV2 365 aa16.2■□□□□ 0.18
USP11-204ENST00000377107 RSPH6AQ9H0K4 717 aa16.2■□□□□ 0.18
USP11-204ENST00000377107 ZBTB40Q9NUA8 1239 aa16.2■□□□□ 0.18
USP11-204ENST00000377107 NUTM2GQ5VZR2 741 aa16.2■□□□□ 0.18
USP11-204ENST00000377107 SLC26A8Q96RN1 970 aa16.2■□□□□ 0.18
USP11-204ENST00000377107 GNAI1P63096 354 aa16.19■□□□□ 0.18
USP11-204ENST00000377107 CT47B1P0C2W7 299 aaPredicted RBP16.19■□□□□ 0.18
USP11-204ENST00000377107 FRMPD1Q5SYB0 1578 aa16.18■□□□□ 0.18
USP11-204ENST00000377107 HECW2Q9P2P5 1572 aa16.18■□□□□ 0.18
USP11-204ENST00000377107 WASLO00401 505 aaPredicted RBP16.18■□□□□ 0.18
USP11-204ENST00000377107 KIAA1210Q9ULL0 1709 aa16.18■□□□□ 0.18
USP11-204ENST00000377107 LTV1Q96GA3 475 aaPredicted RBP16.18■□□□□ 0.18
USP11-204ENST00000377107 VAMP4O75379 141 aa16.17■□□□□ 0.18
USP11-204ENST00000377107 PUS7Q96PZ0 661 aaKnown RBP16.17■□□□□ 0.18
USP11-204ENST00000377107 CALD1Q05682 793 aaKnown RBP16.17■□□□□ 0.18
USP11-204ENST00000377107 HDAC1Q13547 482 aaPredicted RBP16.17■□□□□ 0.18
USP11-204ENST00000377107 RBM42Q9BTD8 480 aaKnown RBP16.16■□□□□ 0.18
USP11-204ENST00000377107 IQSEC2Q5JU85 1478 aa16.16■□□□□ 0.18
USP11-204ENST00000377107 CCDC61Q9Y6R9 512 aa16.15■□□□□ 0.18
USP11-204ENST00000377107 LMTK2Q8IWU2 1503 aa16.15■□□□□ 0.18
USP11-204ENST00000377107 SMC5Q8IY18 1101 aa16.15■□□□□ 0.18
USP11-204ENST00000377107 CEBPAP49715 358 aaPredicted RBP16.14■□□□□ 0.17
USP11-204ENST00000377107 SETBP1Q9Y6X0 1596 aa16.14■□□□□ 0.17
USP11-204ENST00000377107 NUCB1Q02818 461 aa16.14■□□□□ 0.17
USP11-204ENST00000377107 C16orf71Q8IYS4 520 aaPredicted RBP16.14■□□□□ 0.17
USP11-204ENST00000377107 MRPL50Q8N5N7 158 aaKnown RBP16.14■□□□□ 0.17
USP11-204ENST00000377107 CHMP5Q9NZZ3 219 aa16.14■□□□□ 0.17
USP11-204ENST00000377107 SMARCA5O60264 1052 aaPredicted RBP16.13■□□□□ 0.17
USP11-204ENST00000377107 HSP90AB2PQ58FF8 381 aa16.13■□□□□ 0.17
USP11-204ENST00000377107 CAMSAP1Q5T5Y3 1602 aa16.13■□□□□ 0.17
USP11-204ENST00000377107 IL16Q14005 1332 aa16.13■□□□□ 0.17
USP11-204ENST00000377107 ALDH1L2Q3SY69 923 aa16.12■□□□□ 0.17
USP11-204ENST00000377107 ZBTB7BO15156 539 aaPredicted RBP16.12■□□□□ 0.17
USP11-204ENST00000377107 NCLP19338 710 aaKnown RBP16.12■□□□□ 0.17
USP11-204ENST00000377107 MCM4P33991 863 aa16.12■□□□□ 0.17
USP11-204ENST00000377107 PPIP5K1Q6PFW1 1433 aa16.12■□□□□ 0.17
USP11-204ENST00000377107 IL13P35225 146 aa16.12■□□□□ 0.17
USP11-204ENST00000377107 NGDNQ8NEJ9 315 aaKnown RBP16.12■□□□□ 0.17
USP11-204ENST00000377107 NEXMIFQ5QGS0 1516 aa16.12■□□□□ 0.17
USP11-204ENST00000377107 TPRNQ4KMQ1 711 aa16.11■□□□□ 0.17
USP11-204ENST00000377107 PPLO60437 1756 aa16.11■□□□□ 0.17
USP11-204ENST00000377107 LMOD3Q0VAK6 560 aa16.11■□□□□ 0.17
USP11-204ENST00000377107 RTF1Q92541 710 aaKnown RBP16.11■□□□□ 0.17
USP11-204ENST00000377107 SHPRHQ149N8 1683 aa16.11■□□□□ 0.17
USP11-204ENST00000377107 GOLGA6L3A6NEY3 463 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms