RNA–Protein interactions for RNA: ENST00000377038.7

DFFA-202, Transcript of DNA fragmentation factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DFFA, Length 6,032 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-202ENST00000377038 KLHL34Q8N239 644 aa16.35■□□□□ 0.21
DFFA-202ENST00000377038 NEUROD6Q96NK8 337 aa16.35■□□□□ 0.21
DFFA-202ENST00000377038 ABCA5Q8WWZ7 1642 aa16.35■□□□□ 0.21
DFFA-202ENST00000377038 NOB1Q9ULX3 412 aaKnown RBP16.35■□□□□ 0.21
DFFA-202ENST00000377038 PTMSP20962 102 aa16.34■□□□□ 0.21
DFFA-202ENST00000377038 WDR63Q8IWG1 891 aa16.34■□□□□ 0.21
DFFA-202ENST00000377038 GZF1Q9H116 711 aaPredicted RBP16.34■□□□□ 0.21
DFFA-202ENST00000377038 APPP05067 770 aa16.34■□□□□ 0.21
DFFA-202ENST00000377038 GNAI3P08754 354 aa16.34■□□□□ 0.21
DFFA-202ENST00000377038 NRDCO43847 1150 aa16.34■□□□□ 0.21
DFFA-202ENST00000377038 REC8O95072 547 aa16.33■□□□□ 0.21
DFFA-202ENST00000377038 AAMPQ13685 434 aa16.33■□□□□ 0.21
DFFA-202ENST00000377038 ABCC10Q5T3U5 1492 aa16.33■□□□□ 0.21
DFFA-202ENST00000377038 FOXD4L5Q5VV16 416 aaPredicted RBP16.33■□□□□ 0.21
DFFA-202ENST00000377038 FOXD4L4Q8WXT5 416 aaPredicted RBP16.33■□□□□ 0.21
DFFA-202ENST00000377038 BCAR3O75815 825 aa16.33■□□□□ 0.2
DFFA-202ENST00000377038 CFAP43Q8NDM7 1665 aa16.32■□□□□ 0.2
DFFA-202ENST00000377038 DRC7Q8IY82 874 aa16.32■□□□□ 0.2
DFFA-202ENST00000377038 ERC2O15083 957 aa16.32■□□□□ 0.2
DFFA-202ENST00000377038 KIF3AQ9Y496 699 aa16.32■□□□□ 0.2
DFFA-202ENST00000377038 AMOTL1Q8IY63 956 aa16.31■□□□□ 0.2
DFFA-202ENST00000377038 C1orf115Q9H7X2 142 aa16.31■□□□□ 0.2
DFFA-202ENST00000377038 BTBD11A6QL63 1104 aa16.31■□□□□ 0.2
DFFA-202ENST00000377038 NFE2L2Q16236 605 aa16.31■□□□□ 0.2
DFFA-202ENST00000377038 UHRF1BP1LA0JNW5 1464 aa16.31■□□□□ 0.2
DFFA-202ENST00000377038 TCOF1Q13428 1488 aaKnown RBP16.31■□□□□ 0.2
DFFA-202ENST00000377038 ZKSCAN1P17029 563 aaPredicted RBP16.31■□□□□ 0.2
DFFA-202ENST00000377038 ANO2Q9NQ90 1003 aa16.31■□□□□ 0.2
DFFA-202ENST00000377038 EMILIN1Q9Y6C2 1016 aa16.3■□□□□ 0.2
DFFA-202ENST00000377038 MYL6BP14649 208 aa16.3■□□□□ 0.2
DFFA-202ENST00000377038 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.3■□□□□ 0.2
DFFA-202ENST00000377038 SURF6O75683 361 aaKnown RBP16.29■□□□□ 0.2
DFFA-202ENST00000377038 TMPOP42166 694 aaKnown RBP16.29■□□□□ 0.2
DFFA-202ENST00000377038 ZNF428Q96B54 188 aa16.29■□□□□ 0.2
DFFA-202ENST00000377038 GNAT3A8MTJ3 354 aa16.29■□□□□ 0.2
DFFA-202ENST00000377038 USHBP1Q8N6Y0 703 aa16.29■□□□□ 0.2
DFFA-202ENST00000377038 CEP170Q5SW79 1584 aa16.29■□□□□ 0.2
DFFA-202ENST00000377038 DISP3Q9P2K9 1392 aa16.29■□□□□ 0.2
DFFA-202ENST00000377038 L1TD1Q5T7N2 865 aaKnown RBP16.29■□□□□ 0.2
DFFA-202ENST00000377038 RASSF8Q8NHQ8 419 aa16.29■□□□□ 0.2
DFFA-202ENST00000377038 SYAP1Q96A49 352 aaPredicted RBP16.29■□□□□ 0.2
DFFA-202ENST00000377038 TRIM34Q9BYJ4 488 aa16.28■□□□□ 0.2
DFFA-202ENST00000377038 H3BQV1 296 aa16.28■□□□□ 0.2
DFFA-202ENST00000377038 IFFO2Q5TF58 517 aa16.28■□□□□ 0.2
DFFA-202ENST00000377038 FAM184AQ8NB25 1140 aa16.28■□□□□ 0.2
DFFA-202ENST00000377038 SLC4A3P48751 1232 aa16.28■□□□□ 0.2
DFFA-202ENST00000377038 INTS3Q68E01 1043 aaKnown RBP16.28■□□□□ 0.2
DFFA-202ENST00000377038 SYNE3Q6ZMZ3 975 aa16.28■□□□□ 0.2
DFFA-202ENST00000377038 CSPP1Q1MSJ5 1256 aa16.28■□□□□ 0.2
DFFA-202ENST00000377038 RAD21O60216 631 aa16.27■□□□□ 0.19
DFFA-202ENST00000377038 GNAI2P04899 355 aa16.27■□□□□ 0.19
DFFA-202ENST00000377038 WWC1Q8IX03 1113 aa16.27■□□□□ 0.19
DFFA-202ENST00000377038 DMRT2Q9Y5R5 561 aa16.27■□□□□ 0.19
DFFA-202ENST00000377038 PDE3AQ14432 1141 aa16.26■□□□□ 0.19
DFFA-202ENST00000377038 MCM10Q7L590 875 aa16.26■□□□□ 0.19
DFFA-202ENST00000377038 KRT28Q7Z3Y7 464 aa16.26■□□□□ 0.19
DFFA-202ENST00000377038 THUMPD2Q9BTF0 503 aaKnown RBP16.26■□□□□ 0.19
DFFA-202ENST00000377038 AKAP17AQ02040 695 aaKnown RBP16.26■□□□□ 0.19
DFFA-202ENST00000377038 RIMS2Q9UQ26 1411 aa16.26■□□□□ 0.19
DFFA-202ENST00000377038 ADAMTS2O95450 1211 aa16.26■□□□□ 0.19
DFFA-202ENST00000377038 CT47B1P0C2W7 299 aaPredicted RBP16.26■□□□□ 0.19
DFFA-202ENST00000377038 CLASRPQ8N2M8 674 aaKnown RBP16.26■□□□□ 0.19
DFFA-202ENST00000377038 MIS18AQ9NYP9 233 aa16.26■□□□□ 0.19
DFFA-202ENST00000377038 RNF20Q5VTR2 975 aa16.25■□□□□ 0.19
DFFA-202ENST00000377038 CCT4P50991 539 aaKnown RBP16.25■□□□□ 0.19
DFFA-202ENST00000377038 VPS53Q5VIR6 699 aa16.25■□□□□ 0.19
DFFA-202ENST00000377038 WASHC4Q2M389 1173 aa16.25■□□□□ 0.19
DFFA-202ENST00000377038 ACEP12821 1306 aa16.25■□□□□ 0.19
DFFA-202ENST00000377038 CCDC34Q96HJ3 373 aa16.25■□□□□ 0.19
DFFA-202ENST00000377038 SRCIN1Q9C0H9 1055 aa16.25■□□□□ 0.19
DFFA-202ENST00000377038 SF3A1Q15459 793 aaKnown RBP16.24■□□□□ 0.19
DFFA-202ENST00000377038 TRDNQ13061 729 aa16.24■□□□□ 0.19
DFFA-202ENST00000377038 DCTN1Q14203 1278 aa16.24■□□□□ 0.19
DFFA-202ENST00000377038 CHMP4CQ96CF2 233 aa16.24■□□□□ 0.19
DFFA-202ENST00000377038 SHANK2Q9UPX8 1470 aa16.24■□□□□ 0.19
DFFA-202ENST00000377038 MARCH6O60337 910 aa16.24■□□□□ 0.19
DFFA-202ENST00000377038 ATF7IPQ6VMQ6 1270 aa16.24■□□□□ 0.19
DFFA-202ENST00000377038 LRPPRCP42704 1394 aaKnown RBP16.23■□□□□ 0.19
DFFA-202ENST00000377038 SF3B2Q13435 895 aaKnown RBP16.23■□□□□ 0.19
DFFA-202ENST00000377038 CCDC27Q2M243 656 aa16.23■□□□□ 0.19
DFFA-202ENST00000377038 FOXD4L6Q3SYB3 417 aaPredicted RBP16.22■□□□□ 0.19
DFFA-202ENST00000377038 FOXD4L3Q6VB84 417 aaPredicted RBP16.22■□□□□ 0.19
DFFA-202ENST00000377038 CADPS2Q86UW7 1296 aa16.22■□□□□ 0.19
DFFA-202ENST00000377038 CPLX2Q6PUV4 134 aaKnown RBP16.22■□□□□ 0.19
DFFA-202ENST00000377038 FSD1Q9BTV5 496 aa16.21■□□□□ 0.19
DFFA-202ENST00000377038 TARBP1Q13395 1621 aaKnown RBP16.21■□□□□ 0.19
DFFA-202ENST00000377038 MAPKBP1O60336 1514 aa16.21■□□□□ 0.19
DFFA-202ENST00000377038 NINLQ9Y2I6 1382 aa16.21■□□□□ 0.19
DFFA-202ENST00000377038 FYB1O15117 783 aa16.21■□□□□ 0.19
DFFA-202ENST00000377038 CDC45O75419 566 aa16.21■□□□□ 0.19
DFFA-202ENST00000377038 CNNM1Q9NRU3 951 aa16.21■□□□□ 0.19
DFFA-202ENST00000377038 CNTROBQ8N137 903 aa16.21■□□□□ 0.19
DFFA-202ENST00000377038 DNAJC2Q99543 621 aaKnown RBP16.21■□□□□ 0.19
DFFA-202ENST00000377038 SLFN5Q08AF3 891 aa16.21■□□□□ 0.18
DFFA-202ENST00000377038 MCTP1Q6DN14 999 aa16.2■□□□□ 0.18
DFFA-202ENST00000377038 PDZRN3Q9UPQ7 1066 aa16.2■□□□□ 0.18
DFFA-202ENST00000377038 NSD2O96028 1365 aa16.2■□□□□ 0.18
DFFA-202ENST00000377038 CPLX1O14810 134 aa16.2■□□□□ 0.18
DFFA-202ENST00000377038 ZMYM3Q14202 1370 aa16.19■□□□□ 0.18
DFFA-202ENST00000377038 AMOTQ4VCS5 1084 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms