RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 ZNF521Q96K83 1311 aa23.4■■□□□ 1.34
CTTN-203ENST00000376561 USP6P35125 1406 aa23.4■■□□□ 1.34
CTTN-203ENST00000376561 NALCNQ8IZF0 1738 aa23.39■■□□□ 1.34
CTTN-203ENST00000376561 FMN2Q9NZ56 1722 aa23.39■■□□□ 1.34
CTTN-203ENST00000376561 ANKARQ7Z5J8 1434 aa23.39■■□□□ 1.33
CTTN-203ENST00000376561 ZRANB1Q9UGI0 708 aa23.39■■□□□ 1.33
CTTN-203ENST00000376561 PNPLA6Q8IY17 1366 aa23.38■■□□□ 1.33
CTTN-203ENST00000376561 MAP2P11137 1827 aaKnown RBP23.38■■□□□ 1.33
CTTN-203ENST00000376561 TTC21BQ7Z4L5 1316 aa23.37■■□□□ 1.33
CTTN-203ENST00000376561 IRX6P78412 446 aaPredicted RBP23.37■■□□□ 1.33
CTTN-203ENST00000376561 COG3Q96JB2 828 aa23.37■■□□□ 1.33
CTTN-203ENST00000376561 NGEFQ8N5V2 710 aa23.37■■□□□ 1.33
CTTN-203ENST00000376561 RUNDC1Q96C34 613 aa23.36■■□□□ 1.33
CTTN-203ENST00000376561 POLKQ9UBT6 870 aa23.36■■□□□ 1.33
CTTN-203ENST00000376561 FBLN1P23142 703 aa23.36■■□□□ 1.33
CTTN-203ENST00000376561 PMFBP1Q8TBY8 1022 aa23.36■■□□□ 1.33
CTTN-203ENST00000376561 RNF123Q5XPI4 1314 aa23.35■■□□□ 1.33
CTTN-203ENST00000376561 U2AF1L5P0DN76 240 aaPredicted RBP23.35■■□□□ 1.33
CTTN-203ENST00000376561 U2AF1Q01081 240 aaKnown RBP eCLIP23.35■■□□□ 1.331e-7■□□□□ 9.6
CTTN-203ENST00000376561 AATKQ6ZMQ8 1374 aa23.35■■□□□ 1.33
CTTN-203ENST00000376561 SSH2Q76I76 1423 aa23.34■■□□□ 1.33
CTTN-203ENST00000376561 NWD1Q149M9 1564 aa23.33■■□□□ 1.33
CTTN-203ENST00000376561 GOLGA2Q08379 1002 aa23.33■■□□□ 1.33
CTTN-203ENST00000376561 IQSEC2Q5JU85 1478 aa23.33■■□□□ 1.32
CTTN-203ENST00000376561 NGDNQ8NEJ9 315 aaKnown RBP23.32■■□□□ 1.32
CTTN-203ENST00000376561 RBM33Q96EV2 1170 aaKnown RBP23.32■■□□□ 1.32
CTTN-203ENST00000376561 ADGRL3Q9HAR2 1447 aa23.32■■□□□ 1.32
CTTN-203ENST00000376561 DIAPH1O60610 1272 aaKnown RBP23.32■■□□□ 1.32
CTTN-203ENST00000376561 U2SURPO15042 1029 aaKnown RBP23.31■■□□□ 1.32
CTTN-203ENST00000376561 ERICH6BQ5W0A0 696 aa23.31■■□□□ 1.32
CTTN-203ENST00000376561 OVOS2A0A0J9YW53 1432 aa23.3■■□□□ 1.32
CTTN-203ENST00000376561 OVOS2Q6IE36 1432 aa23.3■■□□□ 1.32
CTTN-203ENST00000376561 PPM1GO15355 546 aaPredicted RBP23.3■■□□□ 1.32
CTTN-203ENST00000376561 RCAN3Q9UKA8 241 aa23.3■■□□□ 1.32
CTTN-203ENST00000376561 TCP11L2Q8N4U5 519 aa23.29■■□□□ 1.32
CTTN-203ENST00000376561 EMILIN1Q9Y6C2 1016 aa23.29■■□□□ 1.32
CTTN-203ENST00000376561 TTC21AQ8NDW8 1320 aa23.29■■□□□ 1.32
CTTN-203ENST00000376561 CDK12Q9NYV4 1490 aaPredicted RBP23.28■■□□□ 1.32
CTTN-203ENST00000376561 DUSP27Q5VZP5 1158 aa23.28■■□□□ 1.32
CTTN-203ENST00000376561 SLFN5Q08AF3 891 aa23.27■■□□□ 1.32
CTTN-203ENST00000376561 KDM4FA0A1W2PPD8 638 aa23.26■■□□□ 1.31
CTTN-203ENST00000376561 WWC1Q8IX03 1113 aa23.25■■□□□ 1.31
CTTN-203ENST00000376561 RRS1Q15050 365 aaKnown RBP23.25■■□□□ 1.31
CTTN-203ENST00000376561 PLEKHF1Q96S99 279 aa23.25■■□□□ 1.31
CTTN-203ENST00000376561 RRP7AQ9Y3A4 280 aaKnown RBP23.25■■□□□ 1.31
CTTN-203ENST00000376561 TRMT2AQ8IZ69 625 aaKnown RBP23.24■■□□□ 1.31
CTTN-203ENST00000376561 NEUROD2Q15784 382 aa23.24■■□□□ 1.31
CTTN-203ENST00000376561 USP31Q70CQ4 1352 aa23.23■■□□□ 1.31
CTTN-203ENST00000376561 NCBP3Q53F19 620 aaKnown RBP23.23■■□□□ 1.31
CTTN-203ENST00000376561 C14orf37Q86TY3 774 aa23.23■■□□□ 1.31
CTTN-203ENST00000376561 PHF23Q9BUL5 403 aaPredicted RBP23.23■■□□□ 1.31
CTTN-203ENST00000376561 SPINK5Q9NQ38 1064 aaPredicted RBP23.23■■□□□ 1.31
CTTN-203ENST00000376561 HSPA2P54652 639 aa23.22■■□□□ 1.31
CTTN-203ENST00000376561 PIK3C2AO00443 1686 aa23.21■■□□□ 1.31
CTTN-203ENST00000376561 E9PSI1 815 aa23.21■■□□□ 1.31
CTTN-203ENST00000376561 CCDC27Q2M243 656 aa23.21■■□□□ 1.31
CTTN-203ENST00000376561 PHF8Q9UPP1 1060 aa23.21■■□□□ 1.31
CTTN-203ENST00000376561 DMRT2Q9Y5R5 561 aa23.21■■□□□ 1.31
CTTN-203ENST00000376561 RRP1P56182 461 aaKnown RBP23.21■■□□□ 1.31
CTTN-203ENST00000376561 PROSER2Q86WR7 435 aaPredicted RBP23.21■■□□□ 1.31
CTTN-203ENST00000376561 PNNQ9H307 717 aaKnown RBP23.2■■□□□ 1.3
CTTN-203ENST00000376561 IL13P35225 146 aa23.2■■□□□ 1.3
CTTN-203ENST00000376561 FCHSD2O94868 740 aa23.19■■□□□ 1.3
CTTN-203ENST00000376561 MAPK8IP3Q9UPT6 1336 aa23.18■■□□□ 1.3
CTTN-203ENST00000376561 LRRC7Q96NW7 1537 aa23.18■■□□□ 1.3
CTTN-203ENST00000376561 PPP4R2Q9NY27 417 aa23.17■■□□□ 1.3
CTTN-203ENST00000376561 WDR63Q8IWG1 891 aa23.17■■□□□ 1.3
CTTN-203ENST00000376561 ESCO1Q5FWF5 840 aa23.16■■□□□ 1.3
CTTN-203ENST00000376561 LMTK3Q96Q04 1460 aa23.16■■□□□ 1.3
CTTN-203ENST00000376561 TMPOP42166 694 aaKnown RBP23.16■■□□□ 1.3
CTTN-203ENST00000376561 RSPH6AQ9H0K4 717 aa23.16■■□□□ 1.3
CTTN-203ENST00000376561 STRCP1A6NGW2 1772 aa23.15■■□□□ 1.3
CTTN-203ENST00000376561 USP54Q70EL1 1684 aa23.15■■□□□ 1.3
CTTN-203ENST00000376561 PEAK1Q9H792 1746 aa23.15■■□□□ 1.3
CTTN-203ENST00000376561 MARF1Q9Y4F3 1742 aaKnown RBP23.13■■□□□ 1.29
CTTN-203ENST00000376561 NLRP6P59044 892 aa23.13■■□□□ 1.29
CTTN-203ENST00000376561 SOX12O15370 315 aa23.13■■□□□ 1.29
CTTN-203ENST00000376561 PRKAR2BP31323 418 aa23.13■■□□□ 1.29
CTTN-203ENST00000376561 C19orf44Q9H6X5 657 aa23.13■■□□□ 1.29
CTTN-203ENST00000376561 HMOX1P09601 288 aa23.12■■□□□ 1.29
CTTN-203ENST00000376561 PAK3O75914 559 aaPredicted RBP23.12■■□□□ 1.29
CTTN-203ENST00000376561 ABTB2Q8N961 1025 aa23.12■■□□□ 1.29
CTTN-203ENST00000376561 PELP1Q8IZL8 1130 aaKnown RBP23.11■■□□□ 1.29
CTTN-203ENST00000376561 MAP3K19Q56UN5 1328 aa23.1■■□□□ 1.29
CTTN-203ENST00000376561 ORAI2Q96SN7 254 aa23.1■■□□□ 1.29
CTTN-203ENST00000376561 NEFMP07197 916 aa23.09■■□□□ 1.29
CTTN-203ENST00000376561 PSME1Q06323 249 aa23.09■■□□□ 1.29
CTTN-203ENST00000376561 EIF4A2Q14240 407 aaKnown RBP23.09■■□□□ 1.29
CTTN-203ENST00000376561 TRIM35Q9UPQ4 493 aa23.09■■□□□ 1.29
CTTN-203ENST00000376561 TMEM94Q12767 1356 aa23.09■■□□□ 1.29
CTTN-203ENST00000376561 STRCQ7RTU9 1775 aa23.09■■□□□ 1.29
CTTN-203ENST00000376561 RIPK4P57078 832 aa23.08■■□□□ 1.29
CTTN-203ENST00000376561 HSP90AB2PQ58FF8 381 aa23.08■■□□□ 1.29
CTTN-203ENST00000376561 NUTM2GQ5VZR2 741 aa23.08■■□□□ 1.29
CTTN-203ENST00000376561 NCOA3Q9Y6Q9 1424 aa23.08■■□□□ 1.28
CTTN-203ENST00000376561 SBNO1A3KN83 1393 aa23.08■■□□□ 1.28
CTTN-203ENST00000376561 C1orf167Q5SNV9 1468 aa23.06■■□□□ 1.28
CTTN-203ENST00000376561 FLT4P35916 1363 aa23.06■■□□□ 1.28
CTTN-203ENST00000376561 PLIN1O60240 522 aa23.06■■□□□ 1.28
CTTN-203ENST00000376561 PHACTR3Q96KR7 559 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms