RNA–Protein interactions for RNA: ENST00000376227.3

CCDC22-201, Transcript of coiled-coil domain containing 22, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC22, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC22-201ENST00000376227 ATF7IPQ6VMQ6 1270 aa19.24■□□□□ 0.67
CCDC22-201ENST00000376227 COL3A1P02461 1466 aaPredicted RBP19.24■□□□□ 0.67
CCDC22-201ENST00000376227 HDGFL2Q7Z4V5 671 aaPredicted RBP19.24■□□□□ 0.67
CCDC22-201ENST00000376227 SLKQ9H2G2 1235 aaPredicted RBP19.24■□□□□ 0.67
CCDC22-201ENST00000376227 BRPF3Q9ULD4 1205 aa19.24■□□□□ 0.67
CCDC22-201ENST00000376227 DIP2CQ9Y2E4 1556 aa19.24■□□□□ 0.67
CCDC22-201ENST00000376227 IPO8O15397 1037 aaKnown RBP19.23■□□□□ 0.67
CCDC22-201ENST00000376227 RAPGEF3O95398 923 aa19.23■□□□□ 0.67
CCDC22-201ENST00000376227 TRIM27P14373 513 aa19.23■□□□□ 0.67
CCDC22-201ENST00000376227 ITPRIPQ8IWB1 547 aa19.23■□□□□ 0.67
CCDC22-201ENST00000376227 RTN4Q9NQC3 1192 aaKnown RBP19.23■□□□□ 0.67
CCDC22-201ENST00000376227 POGKQ9P215 609 aa19.23■□□□□ 0.67
CCDC22-201ENST00000376227 TRIM35Q9UPQ4 493 aa19.23■□□□□ 0.67
CCDC22-201ENST00000376227 KIF16BQ96L93 1317 aa19.23■□□□□ 0.67
CCDC22-201ENST00000376227 DIAPH1O60610 1272 aaKnown RBP19.22■□□□□ 0.67
CCDC22-201ENST00000376227 SSH1Q8WYL5 1049 aa19.22■□□□□ 0.67
CCDC22-201ENST00000376227 FYB1O15117 783 aa19.22■□□□□ 0.67
CCDC22-201ENST00000376227 RIPK4P57078 832 aa19.21■□□□□ 0.67
CCDC22-201ENST00000376227 TBC1D2Q9BYX2 928 aa19.2■□□□□ 0.66
CCDC22-201ENST00000376227 PTPRMP28827 1452 aa19.2■□□□□ 0.66
CCDC22-201ENST00000376227 OSCARQ8IYS5 282 aa19.2■□□□□ 0.66
CCDC22-201ENST00000376227 PRAM1Q96QH2 718 aa19.2■□□□□ 0.66
CCDC22-201ENST00000376227 ANTXR1Q9H6X2 564 aa19.2■□□□□ 0.66
CCDC22-201ENST00000376227 MINK1Q8N4C8 1332 aaPredicted RBP19.2■□□□□ 0.66
CCDC22-201ENST00000376227 ANKRD26Q9UPS8 1709 aa19.2■□□□□ 0.66
CCDC22-201ENST00000376227 YTHDC2Q9H6S0 1430 aaKnown RBP19.19■□□□□ 0.66
CCDC22-201ENST00000376227 PRKCSHP14314 528 aaPredicted RBP19.19■□□□□ 0.66
CCDC22-201ENST00000376227 NOB1Q9ULX3 412 aaKnown RBP19.19■□□□□ 0.66
CCDC22-201ENST00000376227 ALDH1L2Q3SY69 923 aa19.18■□□□□ 0.66
CCDC22-201ENST00000376227 CLTCQ00610 1675 aaKnown RBP19.18■□□□□ 0.66
CCDC22-201ENST00000376227 C22orf23Q9BZE7 217 aa19.18■□□□□ 0.66
CCDC22-201ENST00000376227 PNPLA6Q8IY17 1366 aa19.18■□□□□ 0.66
CCDC22-201ENST00000376227 SMC5Q8IY18 1101 aa19.17■□□□□ 0.66
CCDC22-201ENST00000376227 ZNF428Q96B54 188 aa19.17■□□□□ 0.66
CCDC22-201ENST00000376227 FCHSD2O94868 740 aa19.17■□□□□ 0.66
CCDC22-201ENST00000376227 CHMP4BQ9H444 224 aaKnown RBP19.16■□□□□ 0.66
CCDC22-201ENST00000376227 CD163L1Q9NR16 1453 aa19.16■□□□□ 0.66
CCDC22-201ENST00000376227 TMEM131LA2VDJ0 1609 aa19.15■□□□□ 0.66
CCDC22-201ENST00000376227 TMEM57Q8N5G2 664 aa19.15■□□□□ 0.66
CCDC22-201ENST00000376227 MFAP1P55081 439 aaKnown RBP19.14■□□□□ 0.66
CCDC22-201ENST00000376227 L1TD1Q5T7N2 865 aaKnown RBP19.14■□□□□ 0.66
CCDC22-201ENST00000376227 ZBTB40Q9NUA8 1239 aa19.14■□□□□ 0.66
CCDC22-201ENST00000376227 CALD1Q05682 793 aaKnown RBP19.13■□□□□ 0.65
CCDC22-201ENST00000376227 CDK19Q9BWU1 502 aa19.13■□□□□ 0.65
CCDC22-201ENST00000376227 PREX1Q8TCU6 1659 aa19.13■□□□□ 0.65
CCDC22-201ENST00000376227 CDC42BPGQ6DT37 1551 aa19.12■□□□□ 0.65
CCDC22-201ENST00000376227 BRPF1P55201 1214 aaPredicted RBP19.11■□□□□ 0.65
CCDC22-201ENST00000376227 CABP1Q9NZU7 370 aa19.11■□□□□ 0.65
CCDC22-201ENST00000376227 RICTORQ6R327 1708 aa19.11■□□□□ 0.65
CCDC22-201ENST00000376227 CHMP5Q9NZZ3 219 aa19.11■□□□□ 0.65
CCDC22-201ENST00000376227 ARHGEF40Q8TER5 1519 aa19.11■□□□□ 0.65
CCDC22-201ENST00000376227 HSCBQ8IWL3 235 aa19.1■□□□□ 0.65
CCDC22-201ENST00000376227 STAG3Q9UJ98 1225 aa19.1■□□□□ 0.65
CCDC22-201ENST00000376227 NUCB1Q02818 461 aa19.09■□□□□ 0.65
CCDC22-201ENST00000376227 SENP3Q9H4L4 574 aaPredicted RBP19.09■□□□□ 0.65
CCDC22-201ENST00000376227 YEATS2Q9ULM3 1422 aa19.09■□□□□ 0.65
CCDC22-201ENST00000376227 ALKQ9UM73 1620 aa19.09■□□□□ 0.65
CCDC22-201ENST00000376227 PPIP5K1Q6PFW1 1433 aa19.09■□□□□ 0.65
CCDC22-201ENST00000376227 PRKAR2BP31323 418 aa19.08■□□□□ 0.65
CCDC22-201ENST00000376227 FAM135BQ49AJ0 1406 aa19.08■□□□□ 0.65
CCDC22-201ENST00000376227 KIF20BQ96Q89 1820 aa19.08■□□□□ 0.64
CCDC22-201ENST00000376227 RSPH6AQ9H0K4 717 aa19.08■□□□□ 0.64
CCDC22-201ENST00000376227 ATP7BP35670 1465 aa19.07■□□□□ 0.64
CCDC22-201ENST00000376227 LRRC7Q96NW7 1537 aa19.07■□□□□ 0.64
CCDC22-201ENST00000376227 MYO5BQ9ULV0 1848 aa19.07■□□□□ 0.64
CCDC22-201ENST00000376227 FAM43AQ8N2R8 423 aa19.07■□□□□ 0.64
CCDC22-201ENST00000376227 ARHGAP45Q92619 1136 aa19.07■□□□□ 0.64
CCDC22-201ENST00000376227 CHD1LQ86WJ1 897 aa19.06■□□□□ 0.64
CCDC22-201ENST00000376227 MCM4P33991 863 aa19.06■□□□□ 0.64
CCDC22-201ENST00000376227 NFE2L2Q16236 605 aa19.06■□□□□ 0.64
CCDC22-201ENST00000376227 GCC1Q96CN9 775 aa19.06■□□□□ 0.64
CCDC22-201ENST00000376227 POLKQ9UBT6 870 aa19.06■□□□□ 0.64
CCDC22-201ENST00000376227 DLC1Q96QB1 1528 aa19.05■□□□□ 0.64
CCDC22-201ENST00000376227 RBM25P49756 843 aaKnown RBP19.05■□□□□ 0.64
CCDC22-201ENST00000376227 GNAI1P63096 354 aa19.05■□□□□ 0.64
CCDC22-201ENST00000376227 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.05■□□□□ 0.64
CCDC22-201ENST00000376227 SPRYD3Q8NCJ5 442 aa19.05■□□□□ 0.64
CCDC22-201ENST00000376227 LNPKQ9C0E8 428 aa19.03■□□□□ 0.64
CCDC22-201ENST00000376227 BMP2KLQ5H9B9 411 aa19.03■□□□□ 0.64
CCDC22-201ENST00000376227 IFT57Q9NWB7 429 aa19.03■□□□□ 0.64
CCDC22-201ENST00000376227 LMOD3Q0VAK6 560 aa19.02■□□□□ 0.64
CCDC22-201ENST00000376227 FBXO31Q5XUX0 539 aaPredicted RBP19.02■□□□□ 0.64
CCDC22-201ENST00000376227 SNX21Q969T3 373 aa19.02■□□□□ 0.64
CCDC22-201ENST00000376227 PTCH1Q13635 1447 aa19.01■□□□□ 0.63
CCDC22-201ENST00000376227 PIK3R4Q99570 1358 aa19.01■□□□□ 0.63
CCDC22-201ENST00000376227 PPP6R1Q9UPN7 881 aa19.01■□□□□ 0.63
CCDC22-201ENST00000376227 GOLGA6L3A6NEY3 463 aa19.01■□□□□ 0.63
CCDC22-201ENST00000376227 DDX11L8A8MPP1 907 aa19.01■□□□□ 0.63
CCDC22-201ENST00000376227 ZBTB7BO15156 539 aaPredicted RBP19.01■□□□□ 0.63
CCDC22-201ENST00000376227 VAMP4O75379 141 aa19.01■□□□□ 0.63
CCDC22-201ENST00000376227 MRPL50Q8N5N7 158 aaKnown RBP19.01■□□□□ 0.63
CCDC22-201ENST00000376227 ANO8Q9HCE9 1232 aaPredicted RBP19■□□□□ 0.63
CCDC22-201ENST00000376227 EIF5BO60841 1220 aaKnown RBP19■□□□□ 0.63
CCDC22-201ENST00000376227 EDC4Q6P2E9 1401 aaKnown RBP18.99■□□□□ 0.63
CCDC22-201ENST00000376227 HMOX1P09601 288 aa18.99■□□□□ 0.63
CCDC22-201ENST00000376227 ANKRD45Q5TZF3 282 aa18.99■□□□□ 0.63
CCDC22-201ENST00000376227 CDK12Q9NYV4 1490 aaPredicted RBP18.98■□□□□ 0.63
CCDC22-201ENST00000376227 PHACTR3Q96KR7 559 aa18.97■□□□□ 0.63
CCDC22-201ENST00000376227 NCOA3Q9Y6Q9 1424 aa18.97■□□□□ 0.63
CCDC22-201ENST00000376227 API5Q9BZZ5 524 aaKnown RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms