RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 TMEM2Q9UHN6 1383 aa16.51■□□□□ 0.23
MSH5-204ENST00000375755 MTHFSP49914 203 aa16.51■□□□□ 0.23
MSH5-204ENST00000375755 BECN1Q14457 450 aa16.51■□□□□ 0.23
MSH5-204ENST00000375755 ZMYND15Q9H091 742 aa16.51■□□□□ 0.23
MSH5-204ENST00000375755 ANTXR1Q9H6X2 564 aa16.51■□□□□ 0.23
MSH5-204ENST00000375755 FBLN1P23142 703 aa16.51■□□□□ 0.23
MSH5-204ENST00000375755 VIRMAQ69YN4 1812 aaKnown RBP16.51■□□□□ 0.23
MSH5-204ENST00000375755 APAF1O14727 1248 aa16.5■□□□□ 0.23
MSH5-204ENST00000375755 SLC26A8Q96RN1 970 aa16.5■□□□□ 0.23
MSH5-204ENST00000375755 XRCC6P12956 609 aaKnown RBP eCLIP16.5■□□□□ 0.23
MSH5-204ENST00000375755 RIMS1Q86UR5 1692 aaKnown RBP16.5■□□□□ 0.23
MSH5-204ENST00000375755 NAP1L5Q96NT1 182 aaPredicted RBP16.49■□□□□ 0.23
MSH5-204ENST00000375755 SLFN5Q08AF3 891 aa16.49■□□□□ 0.23
MSH5-204ENST00000375755 GLIPR1L2Q4G1C9 344 aa16.49■□□□□ 0.23
MSH5-204ENST00000375755 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.49■□□□□ 0.23
MSH5-204ENST00000375755 PUS7Q96PZ0 661 aaKnown RBP16.48■□□□□ 0.23
MSH5-204ENST00000375755 NLRP1Q9C000 1473 aa16.48■□□□□ 0.23
MSH5-204ENST00000375755 SHPRHQ149N8 1683 aa16.48■□□□□ 0.23
MSH5-204ENST00000375755 SPINK5Q9NQ38 1064 aaPredicted RBP16.48■□□□□ 0.23
MSH5-204ENST00000375755 DMRT2Q9Y5R5 561 aa16.48■□□□□ 0.23
MSH5-204ENST00000375755 BCAR3O75815 825 aa16.47■□□□□ 0.23
MSH5-204ENST00000375755 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.47■□□□□ 0.23
MSH5-204ENST00000375755 ABCC11Q96J66 1382 aa16.47■□□□□ 0.23
MSH5-204ENST00000375755 FYB1O15117 783 aa16.47■□□□□ 0.23
MSH5-204ENST00000375755 NUTM2FA1L443 756 aa16.47■□□□□ 0.23
MSH5-204ENST00000375755 PANK2Q9BZ23 570 aa16.47■□□□□ 0.23
MSH5-204ENST00000375755 PNNQ9H307 717 aaKnown RBP16.47■□□□□ 0.23
MSH5-204ENST00000375755 USP32Q8NFA0 1604 aa16.46■□□□□ 0.23
MSH5-204ENST00000375755 RRP7AQ9Y3A4 280 aaKnown RBP16.46■□□□□ 0.23
MSH5-204ENST00000375755 ADAMTS13Q76LX8 1427 aa16.45■□□□□ 0.22
MSH5-204ENST00000375755 FSD2A1L4K1 749 aa16.45■□□□□ 0.22
MSH5-204ENST00000375755 CLCN1P35523 988 aa16.45■□□□□ 0.22
MSH5-204ENST00000375755 TRMT2AQ8IZ69 625 aaKnown RBP16.45■□□□□ 0.22
MSH5-204ENST00000375755 ATAD2Q6PL18 1390 aa16.45■□□□□ 0.22
MSH5-204ENST00000375755 GOLGA6L3A6NEY3 463 aa16.45■□□□□ 0.22
MSH5-204ENST00000375755 NEUROD2Q15784 382 aa16.45■□□□□ 0.22
MSH5-204ENST00000375755 POLR3AO14802 1390 aaPredicted RBP16.45■□□□□ 0.22
MSH5-204ENST00000375755 ROBO2Q9HCK4 1378 aa16.45■□□□□ 0.22
MSH5-204ENST00000375755 DLC1Q96QB1 1528 aa16.44■□□□□ 0.22
MSH5-204ENST00000375755 TERF2IPQ9NYB0 399 aa16.43■□□□□ 0.22
MSH5-204ENST00000375755 ZRANB1Q9UGI0 708 aa16.43■□□□□ 0.22
MSH5-204ENST00000375755 WASLO00401 505 aaPredicted RBP16.43■□□□□ 0.22
MSH5-204ENST00000375755 MAPK8IP3Q9UPT6 1336 aa16.43■□□□□ 0.22
MSH5-204ENST00000375755 HSP90AA2PQ14568 343 aaPredicted RBP16.42■□□□□ 0.22
MSH5-204ENST00000375755 TBC1D2Q9BYX2 928 aa16.42■□□□□ 0.22
MSH5-204ENST00000375755 GZF1Q9H116 711 aaPredicted RBP16.42■□□□□ 0.22
MSH5-204ENST00000375755 HDGFP51858 240 aaKnown RBP16.41■□□□□ 0.22
MSH5-204ENST00000375755 PODXL2Q9NZ53 605 aa16.41■□□□□ 0.22
MSH5-204ENST00000375755 PTPRUQ92729 1446 aa16.41■□□□□ 0.22
MSH5-204ENST00000375755 NKTRP30414 1462 aaKnown RBP16.41■□□□□ 0.22
MSH5-204ENST00000375755 HSP90AA1P07900 732 aaKnown RBP16.41■□□□□ 0.22
MSH5-204ENST00000375755 HDGFL2Q7Z4V5 671 aaPredicted RBP16.41■□□□□ 0.22
MSH5-204ENST00000375755 NUDT16Q96DE0 195 aaKnown RBP16.4■□□□□ 0.22
MSH5-204ENST00000375755 RRP9O43818 475 aaKnown RBP16.39■□□□□ 0.22
MSH5-204ENST00000375755 MCM4P33991 863 aa16.39■□□□□ 0.22
MSH5-204ENST00000375755 TBC1D32Q96NH3 1257 aa16.39■□□□□ 0.22
MSH5-204ENST00000375755 PRR36Q9H6K5 1346 aa16.39■□□□□ 0.22
MSH5-204ENST00000375755 PPIP5K1Q6PFW1 1433 aa16.39■□□□□ 0.21
MSH5-204ENST00000375755 NINLQ9Y2I6 1382 aa16.39■□□□□ 0.21
MSH5-204ENST00000375755 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.39■□□□□ 0.21
MSH5-204ENST00000375755 SPRYD3Q8NCJ5 442 aa16.39■□□□□ 0.21
MSH5-204ENST00000375755 CLUAP1Q96AJ1 413 aa16.39■□□□□ 0.21
MSH5-204ENST00000375755 PLEKHG1Q9ULL1 1385 aa16.38■□□□□ 0.21
MSH5-204ENST00000375755 NME9Q86XW9 330 aa16.37■□□□□ 0.21
MSH5-204ENST00000375755 PANK1Q8TE04 598 aa16.37■□□□□ 0.21
MSH5-204ENST00000375755 COG6Q9Y2V7 657 aa16.37■□□□□ 0.21
MSH5-204ENST00000375755 NSD2O96028 1365 aa16.37■□□□□ 0.21
MSH5-204ENST00000375755 U2AF1L5P0DN76 240 aaPredicted RBP16.37■□□□□ 0.21
MSH5-204ENST00000375755 U2AF1Q01081 240 aaKnown RBP eCLIP16.37■□□□□ 0.212e-10■■■□□ 16.7
MSH5-204ENST00000375755 KNDC1Q76NI1 1749 aa16.37■□□□□ 0.21
MSH5-204ENST00000375755 ZNF142P52746 1687 aaPredicted RBP16.37■□□□□ 0.21
MSH5-204ENST00000375755 EID1Q9Y6B2 187 aa16.37■□□□□ 0.21
MSH5-204ENST00000375755 TCP11L2Q8N4U5 519 aa16.36■□□□□ 0.21
MSH5-204ENST00000375755 KIF20BQ96Q89 1820 aa16.36■□□□□ 0.21
MSH5-204ENST00000375755 CPS1P31327 1500 aa16.36■□□□□ 0.21
MSH5-204ENST00000375755 U2SURPO15042 1029 aaKnown RBP16.36■□□□□ 0.21
MSH5-204ENST00000375755 PDE3AQ14432 1141 aa16.36■□□□□ 0.21
MSH5-204ENST00000375755 TECPR2O15040 1411 aa16.36■□□□□ 0.21
MSH5-204ENST00000375755 UPF2Q9HAU5 1272 aaKnown RBP16.35■□□□□ 0.21
MSH5-204ENST00000375755 AMOTL2Q9Y2J4 779 aa16.35■□□□□ 0.21
MSH5-204ENST00000375755 ANKRD26Q9UPS8 1709 aa16.35■□□□□ 0.21
MSH5-204ENST00000375755 WWC1Q8IX03 1113 aa16.34■□□□□ 0.21
MSH5-204ENST00000375755 CFAP53Q96M91 514 aa16.34■□□□□ 0.21
MSH5-204ENST00000375755 E9PSI1 815 aa16.34■□□□□ 0.21
MSH5-204ENST00000375755 FAM135BQ49AJ0 1406 aa16.34■□□□□ 0.21
MSH5-204ENST00000375755 MED14O60244 1454 aa16.34■□□□□ 0.21
MSH5-204ENST00000375755 TRAK2O60296 914 aa16.33■□□□□ 0.21
MSH5-204ENST00000375755 RUNDC1Q96C34 613 aa16.33■□□□□ 0.21
MSH5-204ENST00000375755 RBM33Q96EV2 1170 aaKnown RBP16.33■□□□□ 0.21
MSH5-204ENST00000375755 CEP170BQ9Y4F5 1589 aaPredicted RBP16.33■□□□□ 0.2
MSH5-204ENST00000375755 ARHGAP23Q9P227 1491 aa16.33■□□□□ 0.2
MSH5-204ENST00000375755 SLIT1O75093 1534 aa16.32■□□□□ 0.2
MSH5-204ENST00000375755 MRE11P49959 708 aa16.32■□□□□ 0.2
MSH5-204ENST00000375755 CCDC61Q9Y6R9 512 aa16.32■□□□□ 0.2
MSH5-204ENST00000375755 CPSF1Q10570 1443 aaKnown RBP16.32■□□□□ 0.2
MSH5-204ENST00000375755 THEMISQ8N1K5 641 aaPredicted RBP16.32■□□□□ 0.2
MSH5-204ENST00000375755 ERBB4Q15303 1308 aa16.32■□□□□ 0.2
MSH5-204ENST00000375755 COL3A1P02461 1466 aaPredicted RBP16.32■□□□□ 0.2
MSH5-204ENST00000375755 ATP7BP35670 1465 aa16.32■□□□□ 0.2
MSH5-204ENST00000375755 CANXP27824 592 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms