RNA–Protein interactions for RNA: ENST00000375608.7

MCF2L-204, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-204ENST00000375608 SMC5Q8IY18 1101 aa16.91■□□□□ 0.3
MCF2L-204ENST00000375608 STAC3Q96MF2 364 aa16.91■□□□□ 0.3
MCF2L-204ENST00000375608 CIZ1Q9ULV3 898 aaPredicted RBP16.9■□□□□ 0.3
MCF2L-204ENST00000375608 TPM2P07951 284 aa16.9■□□□□ 0.3
MCF2L-204ENST00000375608 PRDM10Q9NQV6 1147 aa16.9■□□□□ 0.3
MCF2L-204ENST00000375608 ZBTB40Q9NUA8 1239 aa16.9■□□□□ 0.3
MCF2L-204ENST00000375608 ADGBQ8N7X0 1667 aa16.9■□□□□ 0.3
MCF2L-204ENST00000375608 POLR3AO14802 1390 aaPredicted RBP16.9■□□□□ 0.3
MCF2L-204ENST00000375608 NUCB2P80303 420 aa16.9■□□□□ 0.3
MCF2L-204ENST00000375608 PBRM1Q86U86 1689 aa16.9■□□□□ 0.3
MCF2L-204ENST00000375608 CEP170Q5SW79 1584 aa16.9■□□□□ 0.3
MCF2L-204ENST00000375608 RAB3GAP1Q15042 981 aa16.89■□□□□ 0.29
MCF2L-204ENST00000375608 TWISTNBQ3B726 338 aaPredicted RBP16.89■□□□□ 0.29
MCF2L-204ENST00000375608 TSPYL6Q8N831 410 aa16.89■□□□□ 0.29
MCF2L-204ENST00000375608 SHANK2Q9UPX8 1470 aa16.89■□□□□ 0.29
MCF2L-204ENST00000375608 EIF4G3O43432 1585 aaKnown RBP16.88■□□□□ 0.29
MCF2L-204ENST00000375608 UQCRHLA0A096LP55 91 aa16.88■□□□□ 0.29
MCF2L-204ENST00000375608 UQCRHP07919 91 aa16.88■□□□□ 0.29
MCF2L-204ENST00000375608 ATAD2Q6PL18 1390 aa16.88■□□□□ 0.29
MCF2L-204ENST00000375608 GDPD2Q9HCC8 539 aa16.88■□□□□ 0.29
MCF2L-204ENST00000375608 CABP1Q9NZU7 370 aa16.88■□□□□ 0.29
MCF2L-204ENST00000375608 CHMP3Q9Y3E7 222 aa16.88■□□□□ 0.29
MCF2L-204ENST00000375608 ANO2Q9NQ90 1003 aa16.88■□□□□ 0.29
MCF2L-204ENST00000375608 PKP1Q13835 747 aa16.87■□□□□ 0.29
MCF2L-204ENST00000375608 BMP2KLQ5H9B9 411 aa16.87■□□□□ 0.29
MCF2L-204ENST00000375608 TSHZ3Q63HK5 1081 aa16.87■□□□□ 0.29
MCF2L-204ENST00000375608 ZGPATQ8N5A5 531 aaKnown RBP16.87■□□□□ 0.29
MCF2L-204ENST00000375608 GCC1Q96CN9 775 aa16.87■□□□□ 0.29
MCF2L-204ENST00000375608 NUP160Q12769 1436 aa16.87■□□□□ 0.29
MCF2L-204ENST00000375608 PRAM1Q96QH2 718 aa16.87■□□□□ 0.29
MCF2L-204ENST00000375608 ISY1Q9ULR0 285 aaKnown RBP16.87■□□□□ 0.29
MCF2L-204ENST00000375608 TRAPPC8Q9Y2L5 1435 aa16.86■□□□□ 0.29
MCF2L-204ENST00000375608 FAM83GA6ND36 823 aa16.86■□□□□ 0.29
MCF2L-204ENST00000375608 VGFO15240 615 aaPredicted RBP16.86■□□□□ 0.29
MCF2L-204ENST00000375608 PRIM1P49642 420 aaKnown RBP16.86■□□□□ 0.29
MCF2L-204ENST00000375608 INTS3Q68E01 1043 aaKnown RBP16.86■□□□□ 0.29
MCF2L-204ENST00000375608 NOS1P29475 1434 aa16.86■□□□□ 0.29
MCF2L-204ENST00000375608 KIAA2012Q0VF49 1180 aa16.85■□□□□ 0.29
MCF2L-204ENST00000375608 RABEP1Q15276 862 aa16.85■□□□□ 0.29
MCF2L-204ENST00000375608 ABCC10Q5T3U5 1492 aa16.85■□□□□ 0.29
MCF2L-204ENST00000375608 MLECQ14165 292 aa16.85■□□□□ 0.29
MCF2L-204ENST00000375608 TRIM35Q9UPQ4 493 aa16.85■□□□□ 0.29
MCF2L-204ENST00000375608 OTUD7AQ8TE49 926 aaPredicted RBP16.84■□□□□ 0.29
MCF2L-204ENST00000375608 DTNBO60941 627 aa16.84■□□□□ 0.29
MCF2L-204ENST00000375608 ZSCAN23Q3MJ62 389 aa16.84■□□□□ 0.29
MCF2L-204ENST00000375608 TRPM1Q7Z4N2 1603 aa16.83■□□□□ 0.29
MCF2L-204ENST00000375608 CT47B1P0C2W7 299 aaPredicted RBP16.83■□□□□ 0.28
MCF2L-204ENST00000375608 KLHL40Q2TBA0 621 aa16.83■□□□□ 0.28
MCF2L-204ENST00000375608 SNX21Q969T3 373 aa16.83■□□□□ 0.28
MCF2L-204ENST00000375608 RBM25P49756 843 aaKnown RBP16.83■□□□□ 0.28
MCF2L-204ENST00000375608 GNAI1P63096 354 aa16.83■□□□□ 0.28
MCF2L-204ENST00000375608 LARP6Q9BRS8 491 aaKnown RBP16.83■□□□□ 0.28
MCF2L-204ENST00000375608 UPF3BQ9BZI7 483 aaKnown RBP16.83■□□□□ 0.28
MCF2L-204ENST00000375608 API5Q9BZZ5 524 aaKnown RBP16.83■□□□□ 0.28
MCF2L-204ENST00000375608 PRDM15P57071 1507 aaPredicted RBP16.82■□□□□ 0.28
MCF2L-204ENST00000375608 MIS18AQ9NYP9 233 aa16.82■□□□□ 0.28
MCF2L-204ENST00000375608 ZNF830Q96NB3 372 aaPredicted RBP16.82■□□□□ 0.28
MCF2L-204ENST00000375608 RBSNQ9H1K0 784 aa16.82■□□□□ 0.28
MCF2L-204ENST00000375608 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.82■□□□□ 0.28
MCF2L-204ENST00000375608 REC8O95072 547 aa16.82■□□□□ 0.28
MCF2L-204ENST00000375608 MCCP23508 829 aa16.82■□□□□ 0.28
MCF2L-204ENST00000375608 RRS1Q15050 365 aaKnown RBP16.82■□□□□ 0.28
MCF2L-204ENST00000375608 KRT24Q2M2I5 525 aa16.81■□□□□ 0.28
MCF2L-204ENST00000375608 PHACTR3Q96KR7 559 aa16.81■□□□□ 0.28
MCF2L-204ENST00000375608 PDCL3Q9H2J4 239 aa16.81■□□□□ 0.28
MCF2L-204ENST00000375608 CCDC27Q2M243 656 aa16.81■□□□□ 0.28
MCF2L-204ENST00000375608 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.81■□□□□ 0.28
MCF2L-204ENST00000375608 EMILIN1Q9Y6C2 1016 aa16.81■□□□□ 0.28
MCF2L-204ENST00000375608 A0A0U1RQG5 324 aaPredicted RBP16.81■□□□□ 0.28
MCF2L-204ENST00000375608 FAM177BA6PVY3 158 aa16.8■□□□□ 0.28
MCF2L-204ENST00000375608 TAOK2Q9UL54 1235 aa16.8■□□□□ 0.28
MCF2L-204ENST00000375608 NPC1L1Q9UHC9 1359 aa16.8■□□□□ 0.28
MCF2L-204ENST00000375608 FYB1O15117 783 aa16.79■□□□□ 0.28
MCF2L-204ENST00000375608 CYB5RLQ6IPT4 315 aa16.79■□□□□ 0.28
MCF2L-204ENST00000375608 EXOC6BQ9Y2D4 811 aa16.79■□□□□ 0.28
MCF2L-204ENST00000375608 DRC7Q8IY82 874 aa16.78■□□□□ 0.28
MCF2L-204ENST00000375608 MAP4K4O95819 1239 aaPredicted RBP16.78■□□□□ 0.28
MCF2L-204ENST00000375608 C8orf58Q8NAV2 365 aa16.78■□□□□ 0.28
MCF2L-204ENST00000375608 ZBTB7BO15156 539 aaPredicted RBP16.77■□□□□ 0.28
MCF2L-204ENST00000375608 SYAP1Q96A49 352 aaPredicted RBP16.77■□□□□ 0.28
MCF2L-204ENST00000375608 EIF2AK4Q9P2K8 1649 aaKnown RBP16.77■□□□□ 0.28
MCF2L-204ENST00000375608 OS9Q13438 667 aaPredicted RBP16.77■□□□□ 0.28
MCF2L-204ENST00000375608 TSC1Q92574 1164 aa16.77■□□□□ 0.28
MCF2L-204ENST00000375608 CDK19Q9BWU1 502 aa16.77■□□□□ 0.28
MCF2L-204ENST00000375608 ZNF428Q96B54 188 aa16.77■□□□□ 0.27
MCF2L-204ENST00000375608 ZNF692Q9BU19 519 aaPredicted RBP16.77■□□□□ 0.27
MCF2L-204ENST00000375608 C14orf93Q9H972 538 aaKnown RBP16.77■□□□□ 0.27
MCF2L-204ENST00000375608 MBIPQ9NS73 344 aa16.77■□□□□ 0.27
MCF2L-204ENST00000375608 F6X3S4 739 aa16.76■□□□□ 0.27
MCF2L-204ENST00000375608 HMMRO75330 724 aa16.76■□□□□ 0.27
MCF2L-204ENST00000375608 KCNJ4P48050 445 aa16.76■□□□□ 0.27
MCF2L-204ENST00000375608 C14orf37Q86TY3 774 aa16.76■□□□□ 0.27
MCF2L-204ENST00000375608 ZHX1Q9UKY1 873 aaPredicted RBP16.76■□□□□ 0.27
MCF2L-204ENST00000375608 SDSP20132 328 aa16.76■□□□□ 0.27
MCF2L-204ENST00000375608 ERVK-7P63135 1459 aa16.75■□□□□ 0.27
MCF2L-204ENST00000375608 VAMP4O75379 141 aa16.75■□□□□ 0.27
MCF2L-204ENST00000375608 OFD1O75665 1012 aa16.75■□□□□ 0.27
MCF2L-204ENST00000375608 SLC4A2P04920 1241 aa16.75■□□□□ 0.27
MCF2L-204ENST00000375608 MCM10Q7L590 875 aa16.75■□□□□ 0.27
MCF2L-204ENST00000375608 WAPLQ7Z5K2 1190 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms