RNA–Protein interactions for RNA: ENST00000375440.8

CUL4A-202, Transcript of cullin 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL4A, Length 2,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-202ENST00000375440 PLEKHF1Q96S99 279 aa34.29■■■■□ 3.08
CUL4A-202ENST00000375440 U2SURPO15042 1029 aaKnown RBP34.28■■■■□ 3.08
CUL4A-202ENST00000375440 FANCIQ9NVI1 1328 aa34.28■■■■□ 3.08
CUL4A-202ENST00000375440 CCDC61Q9Y6R9 512 aa34.27■■■■□ 3.08
CUL4A-202ENST00000375440 NCKAP5LQ9HCH0 1330 aa34.27■■■■□ 3.08
CUL4A-202ENST00000375440 SLIT1O75093 1534 aa34.26■■■■□ 3.08
CUL4A-202ENST00000375440 ARHGAP23Q9P227 1491 aa34.26■■■■□ 3.07
CUL4A-202ENST00000375440 MON2Q7Z3U7 1717 aa34.26■■■■□ 3.07
CUL4A-202ENST00000375440 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.24■■■■□ 3.07
CUL4A-202ENST00000375440 DIAPH1O60610 1272 aaKnown RBP34.23■■■■□ 3.07
CUL4A-202ENST00000375440 PRR36Q9H6K5 1346 aa34.23■■■■□ 3.07
CUL4A-202ENST00000375440 AKAP12Q02952 1782 aa34.23■■■■□ 3.07
CUL4A-202ENST00000375440 POLKQ9UBT6 870 aa34.22■■■■□ 3.07
CUL4A-202ENST00000375440 MAP2P11137 1827 aaKnown RBP34.22■■■■□ 3.07
CUL4A-202ENST00000375440 EID1Q9Y6B2 187 aa34.22■■■■□ 3.07
CUL4A-202ENST00000375440 TRHP20396 242 aaPredicted RBP34.21■■■■□ 3.07
CUL4A-202ENST00000375440 FBLN1P23142 703 aa34.21■■■■□ 3.07
CUL4A-202ENST00000375440 PTPRUQ92729 1446 aa34.2■■■■□ 3.07
CUL4A-202ENST00000375440 NME9Q86XW9 330 aa34.2■■■■□ 3.06
CUL4A-202ENST00000375440 SLC26A8Q96RN1 970 aa34.2■■■■□ 3.06
CUL4A-202ENST00000375440 ITSN1Q15811 1721 aa34.19■■■■□ 3.06
CUL4A-202ENST00000375440 PLPPR3Q6T4P5 718 aa34.19■■■■□ 3.06
CUL4A-202ENST00000375440 TMPOP42166 694 aaKnown RBP34.17■■■■□ 3.06
CUL4A-202ENST00000375440 ZRANB1Q9UGI0 708 aa34.15■■■■□ 3.06
CUL4A-202ENST00000375440 MAPK8IP3Q9UPT6 1336 aa34.14■■■■□ 3.06
CUL4A-202ENST00000375440 KDM2BQ8NHM5 1336 aa34.14■■■■□ 3.06
CUL4A-202ENST00000375440 TOPAZ1Q8N9V7 1692 aa34.13■■■■□ 3.05
CUL4A-202ENST00000375440 MYH16Q9H6N6 1097 aa34.13■■■■□ 3.05
CUL4A-202ENST00000375440 TRIM35Q9UPQ4 493 aa34.13■■■■□ 3.05
CUL4A-202ENST00000375440 TCERG1O14776 1098 aaKnown RBP34.12■■■■□ 3.05
CUL4A-202ENST00000375440 PPM1GO15355 546 aaPredicted RBP34.12■■■■□ 3.05
CUL4A-202ENST00000375440 RARSP54136 660 aaKnown RBP34.12■■■■□ 3.05
CUL4A-202ENST00000375440 ZNF692Q9BU19 519 aaPredicted RBP34.12■■■■□ 3.05
CUL4A-202ENST00000375440 TBX22Q9Y458 520 aa34.11■■■■□ 3.05
CUL4A-202ENST00000375440 AATKQ6ZMQ8 1374 aa34.11■■■■□ 3.05
CUL4A-202ENST00000375440 THEMISQ8N1K5 641 aaPredicted RBP34.11■■■■□ 3.05
CUL4A-202ENST00000375440 PDE3AQ14432 1141 aa34.1■■■■□ 3.05
CUL4A-202ENST00000375440 LRRC7Q96NW7 1537 aa34.1■■■■□ 3.05
CUL4A-202ENST00000375440 EMILIN1Q9Y6C2 1016 aa34.09■■■■□ 3.05
CUL4A-202ENST00000375440 FCHSD2O94868 740 aa34.08■■■■□ 3.05
CUL4A-202ENST00000375440 PNNQ9H307 717 aaKnown RBP34.08■■■■□ 3.05
CUL4A-202ENST00000375440 MSH5O43196 834 aa34.08■■■■□ 3.05
CUL4A-202ENST00000375440 CDK12Q9NYV4 1490 aaPredicted RBP34.08■■■■□ 3.05
CUL4A-202ENST00000375440 COG3Q96JB2 828 aa34.07■■■■□ 3.05
CUL4A-202ENST00000375440 AMOTL2Q9Y2J4 779 aa34.07■■■■□ 3.05
CUL4A-202ENST00000375440 NRKQ7Z2Y5 1582 aa34.06■■■■□ 3.04
CUL4A-202ENST00000375440 RSPH6AQ9H0K4 717 aa34.05■■■■□ 3.04
CUL4A-202ENST00000375440 DIP2AQ14689 1571 aa34.05■■■■□ 3.04
CUL4A-202ENST00000375440 PLEKHG3A1L390 1219 aa34.04■■■■□ 3.04
CUL4A-202ENST00000375440 PTCH1Q13635 1447 aa34.04■■■■□ 3.04
CUL4A-202ENST00000375440 CENPQQ7L2Z9 268 aaPredicted RBP34.04■■■■□ 3.04
CUL4A-202ENST00000375440 RIPK4P57078 832 aa34.03■■■■□ 3.04
CUL4A-202ENST00000375440 ACEP12821 1306 aa34.02■■■■□ 3.04
CUL4A-202ENST00000375440 MS4A1P11836 297 aa34.01■■■■□ 3.04
CUL4A-202ENST00000375440 NUTM2FA1L443 756 aa34.01■■■■□ 3.03
CUL4A-202ENST00000375440 CANXP27824 592 aaKnown RBP34.01■■■■□ 3.03
CUL4A-202ENST00000375440 IL13P35225 146 aa34.01■■■■□ 3.03
CUL4A-202ENST00000375440 TSR2Q969E8 191 aaKnown RBP34.01■■■■□ 3.03
CUL4A-202ENST00000375440 IL16Q14005 1332 aa34.01■■■■□ 3.03
CUL4A-202ENST00000375440 PRKAR2BP31323 418 aa34■■■■□ 3.03
CUL4A-202ENST00000375440 SKAP1Q86WV1 359 aa34■■■■□ 3.03
CUL4A-202ENST00000375440 PANK1Q8TE04 598 aa34■■■■□ 3.03
CUL4A-202ENST00000375440 FRAT1Q92837 279 aaPredicted RBP33.99■■■■□ 3.03
CUL4A-202ENST00000375440 TTC21BQ7Z4L5 1316 aa33.99■■■■□ 3.03
CUL4A-202ENST00000375440 RRS1Q15050 365 aaKnown RBP33.98■■■■□ 3.03
CUL4A-202ENST00000375440 CEP170BQ9Y4F5 1589 aaPredicted RBP33.97■■■■□ 3.03
CUL4A-202ENST00000375440 XRN1Q8IZH2 1706 aaKnown RBP33.97■■■■□ 3.03
CUL4A-202ENST00000375440 USP6P35125 1406 aa33.96■■■■□ 3.03
CUL4A-202ENST00000375440 CT47B1P0C2W7 299 aaPredicted RBP33.96■■■■□ 3.03
CUL4A-202ENST00000375440 BCL2L13Q9BXK5 485 aa33.96■■■■□ 3.03
CUL4A-202ENST00000375440 COG6Q9Y2V7 657 aa33.95■■■■□ 3.03
CUL4A-202ENST00000375440 HMOX1P09601 288 aa33.94■■■■□ 3.02
CUL4A-202ENST00000375440 RIMS1Q86UR5 1692 aaKnown RBP33.93■■■■□ 3.02
CUL4A-202ENST00000375440 EXOSC9Q06265 439 aaKnown RBP33.93■■■■□ 3.02
CUL4A-202ENST00000375440 PHACTR3Q96KR7 559 aa33.93■■■■□ 3.02
CUL4A-202ENST00000375440 OVOS2A0A0J9YW53 1432 aa33.93■■■■□ 3.02
CUL4A-202ENST00000375440 OVOS2Q6IE36 1432 aa33.93■■■■□ 3.02
CUL4A-202ENST00000375440 PDE4AP27815 886 aa33.91■■■■□ 3.02
CUL4A-202ENST00000375440 SSH2Q76I76 1423 aa33.91■■■■□ 3.02
CUL4A-202ENST00000375440 RLBP1P12271 317 aa33.9■■■■□ 3.02
CUL4A-202ENST00000375440 TNNQ9UQP3 1299 aa33.9■■■■□ 3.02
CUL4A-202ENST00000375440 NEFMP07197 916 aa33.9■■■■□ 3.02
CUL4A-202ENST00000375440 NALCNQ8IZF0 1738 aa33.89■■■■□ 3.02
CUL4A-202ENST00000375440 NFE2L2Q16236 605 aa33.89■■■■□ 3.02
CUL4A-202ENST00000375440 CLUAP1Q96AJ1 413 aa33.89■■■■□ 3.02
CUL4A-202ENST00000375440 BACH2Q9BYV9 841 aa33.89■■■■□ 3.02
CUL4A-202ENST00000375440 RGPD8O14715 1765 aaPredicted RBP33.88■■■■□ 3.01
CUL4A-202ENST00000375440 ANP32EQ9BTT0 268 aa33.87■■■■□ 3.01
CUL4A-202ENST00000375440 PIK3R4Q99570 1358 aa33.84■■■■□ 3.01
CUL4A-202ENST00000375440 KCNA6P17658 529 aa33.84■■■■□ 3.01
CUL4A-202ENST00000375440 IGHDP01880 384 aa33.83■■■■□ 3.01
CUL4A-202ENST00000375440 PMFBP1Q8TBY8 1022 aa33.83■■■■□ 3.01
CUL4A-202ENST00000375440 USP31Q70CQ4 1352 aa33.83■■■■□ 3.01
CUL4A-202ENST00000375440 AAMPQ13685 434 aa33.8■■■■□ 3
CUL4A-202ENST00000375440 SSH1Q8WYL5 1049 aa33.8■■■■□ 3
CUL4A-202ENST00000375440 ZKSCAN2Q63HK3 967 aa33.8■■■■□ 3
CUL4A-202ENST00000375440 SMC4Q9NTJ3 1288 aa33.8■■■■□ 3
CUL4A-202ENST00000375440 DLG5Q8TDM6 1919 aa33.79■■■■□ 3
CUL4A-202ENST00000375440 PEAK1Q9H792 1746 aa33.79■■■■□ 3
CUL4A-202ENST00000375440 TTC21AQ8NDW8 1320 aa33.79■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms