RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 WASLO00401 505 aaPredicted RBP15.88■□□□□ 0.13
UBR4-203ENST00000375225 PLIN1O60240 522 aa15.88■□□□□ 0.13
UBR4-203ENST00000375225 TERF2IPQ9NYB0 399 aa15.88■□□□□ 0.13
UBR4-203ENST00000375225 SHPRHQ149N8 1683 aa15.87■□□□□ 0.13
UBR4-203ENST00000375225 AAMPQ13685 434 aa15.87■□□□□ 0.13
UBR4-203ENST00000375225 IPO9Q96P70 1041 aaKnown RBP15.87■□□□□ 0.13
UBR4-203ENST00000375225 WDR63Q8IWG1 891 aa15.86■□□□□ 0.13
UBR4-203ENST00000375225 CCDC27Q2M243 656 aa15.85■□□□□ 0.13
UBR4-203ENST00000375225 PNNQ9H307 717 aaKnown RBP15.85■□□□□ 0.13
UBR4-203ENST00000375225 NCKAP5LQ9HCH0 1330 aa15.85■□□□□ 0.13
UBR4-203ENST00000375225 ATP7BP35670 1465 aa15.85■□□□□ 0.13
UBR4-203ENST00000375225 ANKRD26Q9UPS8 1709 aa15.84■□□□□ 0.13
UBR4-203ENST00000375225 ZBTB47Q9UFB7 747 aaPredicted RBP15.84■□□□□ 0.13
UBR4-203ENST00000375225 NWD1Q149M9 1564 aa15.84■□□□□ 0.13
UBR4-203ENST00000375225 PDE3AQ14432 1141 aa15.84■□□□□ 0.13
UBR4-203ENST00000375225 HDGFL2Q7Z4V5 671 aaPredicted RBP15.84■□□□□ 0.13
UBR4-203ENST00000375225 ITSN1Q15811 1721 aa15.83■□□□□ 0.13
UBR4-203ENST00000375225 PDE4AP27815 886 aa15.83■□□□□ 0.12
UBR4-203ENST00000375225 WWC1Q8IX03 1113 aa15.83■□□□□ 0.12
UBR4-203ENST00000375225 A0A1W2PP64 1363 aa15.82■□□□□ 0.12
UBR4-203ENST00000375225 TOPAZ1Q8N9V7 1692 aa15.82■□□□□ 0.12
UBR4-203ENST00000375225 IQSEC2Q5JU85 1478 aa15.82■□□□□ 0.12
UBR4-203ENST00000375225 KCNA6P17658 529 aa15.82■□□□□ 0.12
UBR4-203ENST00000375225 CANXP27824 592 aaKnown RBP15.82■□□□□ 0.12
UBR4-203ENST00000375225 MTHFSP49914 203 aa15.82■□□□□ 0.12
UBR4-203ENST00000375225 BACH2Q9BYV9 841 aa15.82■□□□□ 0.12
UBR4-203ENST00000375225 MYH16Q9H6N6 1097 aa15.82■□□□□ 0.12
UBR4-203ENST00000375225 PPIP5K1Q6PFW1 1433 aa15.81■□□□□ 0.12
UBR4-203ENST00000375225 DDRGK1Q96HY6 314 aa15.81■□□□□ 0.12
UBR4-203ENST00000375225 LMTK3Q96Q04 1460 aa15.81■□□□□ 0.12
UBR4-203ENST00000375225 CDC42BPGQ6DT37 1551 aa15.8■□□□□ 0.12
UBR4-203ENST00000375225 KDM2BQ8NHM5 1336 aa15.8■□□□□ 0.12
UBR4-203ENST00000375225 KIF20BQ96Q89 1820 aa15.8■□□□□ 0.12
UBR4-203ENST00000375225 CD163L1Q9NR16 1453 aa15.8■□□□□ 0.12
UBR4-203ENST00000375225 AKAP12Q02952 1782 aa15.79■□□□□ 0.12
UBR4-203ENST00000375225 CT47B1P0C2W7 299 aaPredicted RBP15.79■□□□□ 0.12
UBR4-203ENST00000375225 TNNT2P45379 298 aaPredicted RBP15.79■□□□□ 0.12
UBR4-203ENST00000375225 NUDT16Q96DE0 195 aaKnown RBP15.79■□□□□ 0.12
UBR4-203ENST00000375225 CABP1Q9NZU7 370 aa15.79■□□□□ 0.12
UBR4-203ENST00000375225 NALCNQ8IZF0 1738 aa15.79■□□□□ 0.12
UBR4-203ENST00000375225 TCP11L2Q8N4U5 519 aa15.78■□□□□ 0.12
UBR4-203ENST00000375225 CCDC61Q9Y6R9 512 aa15.78■□□□□ 0.12
UBR4-203ENST00000375225 MON2Q7Z3U7 1717 aa15.78■□□□□ 0.12
UBR4-203ENST00000375225 C20orf194Q5TEA3 1177 aa15.78■□□□□ 0.12
UBR4-203ENST00000375225 FMN2Q9NZ56 1722 aa15.78■□□□□ 0.12
UBR4-203ENST00000375225 U2AF1L5P0DN76 240 aaPredicted RBP15.77■□□□□ 0.11
UBR4-203ENST00000375225 U2AF1Q01081 240 aaKnown RBP eCLIP15.77■□□□□ 0.11
UBR4-203ENST00000375225 ANKARQ7Z5J8 1434 aa15.76■□□□□ 0.11
UBR4-203ENST00000375225 MAPK8IP3Q9UPT6 1336 aa15.75■□□□□ 0.11
UBR4-203ENST00000375225 CPSF1Q10570 1443 aaKnown RBP15.75■□□□□ 0.11
UBR4-203ENST00000375225 ADGRL3Q9HAR2 1447 aa15.75■□□□□ 0.11
UBR4-203ENST00000375225 NEFMP07197 916 aa15.74■□□□□ 0.11
UBR4-203ENST00000375225 HSPA2P54652 639 aa15.74■□□□□ 0.11
UBR4-203ENST00000375225 EDC4Q6P2E9 1401 aaKnown RBP15.74■□□□□ 0.11
UBR4-203ENST00000375225 PRR36Q9H6K5 1346 aa15.74■□□□□ 0.11
UBR4-203ENST00000375225 SPINK5Q9NQ38 1064 aaPredicted RBP15.73■□□□□ 0.11
UBR4-203ENST00000375225 STRCQ7RTU9 1775 aa15.73■□□□□ 0.11
UBR4-203ENST00000375225 RGPD8O14715 1765 aaPredicted RBP15.73■□□□□ 0.11
UBR4-203ENST00000375225 FAM161AQ3B820 660 aa15.73■□□□□ 0.11
UBR4-203ENST00000375225 PMFBP1Q8TBY8 1022 aa15.73■□□□□ 0.11
UBR4-203ENST00000375225 ZNF692Q9BU19 519 aaPredicted RBP15.73■□□□□ 0.11
UBR4-203ENST00000375225 BCAR3O75815 825 aa15.72■□□□□ 0.11
UBR4-203ENST00000375225 NEUROD2Q15784 382 aa15.72■□□□□ 0.11
UBR4-203ENST00000375225 IL16Q14005 1332 aa15.71■□□□□ 0.11
UBR4-203ENST00000375225 PLEKHG3A1L390 1219 aa15.71■□□□□ 0.11
UBR4-203ENST00000375225 C14orf37Q86TY3 774 aa15.71■□□□□ 0.11
UBR4-203ENST00000375225 NRKQ7Z2Y5 1582 aa15.7■□□□□ 0.1
UBR4-203ENST00000375225 RARSP54136 660 aaKnown RBP15.7■□□□□ 0.1
UBR4-203ENST00000375225 NPM2Q86SE8 214 aaKnown RBP15.7■□□□□ 0.1
UBR4-203ENST00000375225 CLUAP1Q96AJ1 413 aa15.7■□□□□ 0.1
UBR4-203ENST00000375225 NUTM2FA1L443 756 aa15.69■□□□□ 0.1
UBR4-203ENST00000375225 DIAPH1O60610 1272 aaKnown RBP15.69■□□□□ 0.1
UBR4-203ENST00000375225 RTL5Q5HYW3 569 aaPredicted RBP15.69■□□□□ 0.1
UBR4-203ENST00000375225 PROSER2Q86WR7 435 aaPredicted RBP15.69■□□□□ 0.1
UBR4-203ENST00000375225 U2SURPO15042 1029 aaKnown RBP15.68■□□□□ 0.1
UBR4-203ENST00000375225 FYB1O15117 783 aa15.68■□□□□ 0.1
UBR4-203ENST00000375225 GGNBP2Q9H3C7 697 aa15.68■□□□□ 0.1
UBR4-203ENST00000375225 DAXXQ9UER7 740 aaPredicted RBP15.68■□□□□ 0.1
UBR4-203ENST00000375225 RRP7AQ9Y3A4 280 aaKnown RBP15.68■□□□□ 0.1
UBR4-203ENST00000375225 COL3A1P02461 1466 aaPredicted RBP15.68■□□□□ 0.1
UBR4-203ENST00000375225 STRCP1A6NGW2 1772 aa15.68■□□□□ 0.1
UBR4-203ENST00000375225 ACEP12821 1306 aa15.67■□□□□ 0.1
UBR4-203ENST00000375225 NCOA3Q9Y6Q9 1424 aa15.67■□□□□ 0.1
UBR4-203ENST00000375225 CALD1Q05682 793 aaKnown RBP15.67■□□□□ 0.1
UBR4-203ENST00000375225 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.67■□□□□ 0.1
UBR4-203ENST00000375225 USP6P35125 1406 aa15.66■□□□□ 0.1
UBR4-203ENST00000375225 PNPLA6Q8IY17 1366 aa15.66■□□□□ 0.1
UBR4-203ENST00000375225 PPM1GO15355 546 aaPredicted RBP15.66■□□□□ 0.1
UBR4-203ENST00000375225 FRAT1Q92837 279 aaPredicted RBP15.66■□□□□ 0.1
UBR4-203ENST00000375225 DMRT2Q9Y5R5 561 aa15.66■□□□□ 0.1
UBR4-203ENST00000375225 FCHSD2O94868 740 aa15.65■□□□□ 0.1
UBR4-203ENST00000375225 TMPOP42166 694 aaKnown RBP15.65■□□□□ 0.1
UBR4-203ENST00000375225 NGDNQ8NEJ9 315 aaKnown RBP15.65■□□□□ 0.1
UBR4-203ENST00000375225 ZKSCAN2Q63HK3 967 aa15.64■□□□□ 0.09
UBR4-203ENST00000375225 PLEKHF1Q96S99 279 aa15.64■□□□□ 0.09
UBR4-203ENST00000375225 RWDD1Q9H446 243 aaPredicted RBP15.64■□□□□ 0.09
UBR4-203ENST00000375225 PAK3O75914 559 aaPredicted RBP15.63■□□□□ 0.09
UBR4-203ENST00000375225 DCCP43146 1447 aa15.63■□□□□ 0.09
UBR4-203ENST00000375225 ZNF428Q96B54 188 aa15.63■□□□□ 0.09
UBR4-203ENST00000375225 RBM33Q96EV2 1170 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms