RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 MAPK8IP3Q9UPT6 1336 aa20.71■□□□□ 0.91
CNKSR1-202ENST00000374253 PAK3O75914 559 aaPredicted RBP20.71■□□□□ 0.91
CNKSR1-202ENST00000374253 ANP32AP39687 249 aaKnown RBP20.71■□□□□ 0.91
CNKSR1-202ENST00000374253 PPIP5K1Q6PFW1 1433 aa20.71■□□□□ 0.91
CNKSR1-202ENST00000374253 CLUAP1Q96AJ1 413 aa20.71■□□□□ 0.91
CNKSR1-202ENST00000374253 NUDT16Q96DE0 195 aaKnown RBP20.71■□□□□ 0.91
CNKSR1-202ENST00000374253 DLC1Q96QB1 1528 aa20.7■□□□□ 0.9
CNKSR1-202ENST00000374253 LTKP29376 864 aa20.7■□□□□ 0.9
CNKSR1-202ENST00000374253 TMPOP42166 694 aaKnown RBP20.7■□□□□ 0.9
CNKSR1-202ENST00000374253 CENPQQ7L2Z9 268 aaPredicted RBP20.7■□□□□ 0.9
CNKSR1-202ENST00000374253 SLC26A8Q96RN1 970 aa20.7■□□□□ 0.9
CNKSR1-202ENST00000374253 EMILIN1Q9Y6C2 1016 aa20.7■□□□□ 0.9
CNKSR1-202ENST00000374253 RGS3P49796 1198 aa20.69■□□□□ 0.9
CNKSR1-202ENST00000374253 POLKQ9UBT6 870 aa20.69■□□□□ 0.9
CNKSR1-202ENST00000374253 CCDC27Q2M243 656 aa20.69■□□□□ 0.9
CNKSR1-202ENST00000374253 BACH2Q9BYV9 841 aa20.69■□□□□ 0.9
CNKSR1-202ENST00000374253 TMEM2Q9UHN6 1383 aa20.69■□□□□ 0.9
CNKSR1-202ENST00000374253 TRIM35Q9UPQ4 493 aa20.68■□□□□ 0.9
CNKSR1-202ENST00000374253 HMOX1P09601 288 aa20.68■□□□□ 0.9
CNKSR1-202ENST00000374253 RLBP1P12271 317 aa20.67■□□□□ 0.9
CNKSR1-202ENST00000374253 RIPK4P57078 832 aa20.67■□□□□ 0.9
CNKSR1-202ENST00000374253 ANKRD26Q9UPS8 1709 aa20.67■□□□□ 0.9
CNKSR1-202ENST00000374253 IGHDP01880 384 aa20.67■□□□□ 0.9
CNKSR1-202ENST00000374253 HDGFP51858 240 aaKnown RBP20.67■□□□□ 0.9
CNKSR1-202ENST00000374253 KIF20BQ96Q89 1820 aa20.67■□□□□ 0.9
CNKSR1-202ENST00000374253 MYH16Q9H6N6 1097 aa20.66■□□□□ 0.9
CNKSR1-202ENST00000374253 ROBO2Q9HCK4 1378 aa20.66■□□□□ 0.9
CNKSR1-202ENST00000374253 MED14O60244 1454 aa20.65■□□□□ 0.9
CNKSR1-202ENST00000374253 RRS1Q15050 365 aaKnown RBP20.65■□□□□ 0.9
CNKSR1-202ENST00000374253 NOP58Q9Y2X3 529 aaKnown RBP20.65■□□□□ 0.9
CNKSR1-202ENST00000374253 MS4A1P11836 297 aa20.65■□□□□ 0.9
CNKSR1-202ENST00000374253 EXOSC9Q06265 439 aaKnown RBP20.65■□□□□ 0.9
CNKSR1-202ENST00000374253 PRR36Q9H6K5 1346 aa20.65■□□□□ 0.9
CNKSR1-202ENST00000374253 ATP7BP35670 1465 aa20.64■□□□□ 0.89
CNKSR1-202ENST00000374253 ADGRB2O60241 1585 aa20.64■□□□□ 0.89
CNKSR1-202ENST00000374253 PRKAR2BP31323 418 aa20.64■□□□□ 0.89
CNKSR1-202ENST00000374253 PDE3AQ14432 1141 aa20.64■□□□□ 0.89
CNKSR1-202ENST00000374253 CCDC61Q9Y6R9 512 aa20.64■□□□□ 0.89
CNKSR1-202ENST00000374253 IPO9Q96P70 1041 aaKnown RBP20.63■□□□□ 0.89
CNKSR1-202ENST00000374253 UBR1Q8IWV7 1749 aa20.63■□□□□ 0.89
CNKSR1-202ENST00000374253 PNPLA6Q8IY17 1366 aa20.62■□□□□ 0.89
CNKSR1-202ENST00000374253 PHACTR3Q96KR7 559 aa20.61■□□□□ 0.89
CNKSR1-202ENST00000374253 CPSF1Q10570 1443 aaKnown RBP20.61■□□□□ 0.89
CNKSR1-202ENST00000374253 LAS1LQ9Y4W2 734 aaKnown RBP20.61■□□□□ 0.89
CNKSR1-202ENST00000374253 ADAMTS13Q76LX8 1427 aa20.61■□□□□ 0.89
CNKSR1-202ENST00000374253 CPS1P31327 1500 aa20.61■□□□□ 0.89
CNKSR1-202ENST00000374253 MAP2P11137 1827 aaKnown RBP20.61■□□□□ 0.89
CNKSR1-202ENST00000374253 THUMPD2Q9BTF0 503 aaKnown RBP20.6■□□□□ 0.89
CNKSR1-202ENST00000374253 TRHP20396 242 aaPredicted RBP20.6■□□□□ 0.89
CNKSR1-202ENST00000374253 EDC4Q6P2E9 1401 aaKnown RBP20.59■□□□□ 0.89
CNKSR1-202ENST00000374253 SOX12O15370 315 aa20.59■□□□□ 0.89
CNKSR1-202ENST00000374253 COG3Q96JB2 828 aa20.59■□□□□ 0.89
CNKSR1-202ENST00000374253 RSPH6AQ9H0K4 717 aa20.59■□□□□ 0.89
CNKSR1-202ENST00000374253 SMC4Q9NTJ3 1288 aa20.58■□□□□ 0.88
CNKSR1-202ENST00000374253 LRRC7Q96NW7 1537 aa20.58■□□□□ 0.88
CNKSR1-202ENST00000374253 FAM135BQ49AJ0 1406 aa20.57■□□□□ 0.88
CNKSR1-202ENST00000374253 ZBTB47Q9UFB7 747 aaPredicted RBP20.57■□□□□ 0.88
CNKSR1-202ENST00000374253 FCHSD2O94868 740 aa20.56■□□□□ 0.88
CNKSR1-202ENST00000374253 PCDHB15Q9Y5E8 787 aa20.56■□□□□ 0.88
CNKSR1-202ENST00000374253 TECPR2O15040 1411 aa20.56■□□□□ 0.88
CNKSR1-202ENST00000374253 SSH1Q8WYL5 1049 aa20.56■□□□□ 0.88
CNKSR1-202ENST00000374253 EID1Q9Y6B2 187 aa20.55■□□□□ 0.88
CNKSR1-202ENST00000374253 IL13P35225 146 aa20.54■□□□□ 0.88
CNKSR1-202ENST00000374253 FTSJ3Q8IY81 847 aaKnown RBP20.54■□□□□ 0.88
CNKSR1-202ENST00000374253 PTPRUQ92729 1446 aa20.53■□□□□ 0.88
CNKSR1-202ENST00000374253 ACEP12821 1306 aa20.53■□□□□ 0.88
CNKSR1-202ENST00000374253 CDC42BPGQ6DT37 1551 aa20.53■□□□□ 0.88
CNKSR1-202ENST00000374253 NEFMP07197 916 aa20.53■□□□□ 0.88
CNKSR1-202ENST00000374253 NBR1Q14596 966 aa20.53■□□□□ 0.88
CNKSR1-202ENST00000374253 PMFBP1Q8TBY8 1022 aa20.53■□□□□ 0.88
CNKSR1-202ENST00000374253 AMOTL2Q9Y2J4 779 aa20.53■□□□□ 0.88
CNKSR1-202ENST00000374253 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.53■□□□□ 0.88
CNKSR1-202ENST00000374253 SIRT1Q96EB6 747 aa20.53■□□□□ 0.88
CNKSR1-202ENST00000374253 PLEKHG1Q9ULL1 1385 aa20.52■□□□□ 0.88
CNKSR1-202ENST00000374253 ZKSCAN2Q63HK3 967 aa20.52■□□□□ 0.88
CNKSR1-202ENST00000374253 KNDC1Q76NI1 1749 aa20.52■□□□□ 0.88
CNKSR1-202ENST00000374253 NCBP3Q53F19 620 aaKnown RBP20.52■□□□□ 0.87
CNKSR1-202ENST00000374253 PNNQ9H307 717 aaKnown RBP20.52■□□□□ 0.87
CNKSR1-202ENST00000374253 C8orf34Q49A92 452 aa20.51■□□□□ 0.87
CNKSR1-202ENST00000374253 TRIM27P14373 513 aa20.5■□□□□ 0.87
CNKSR1-202ENST00000374253 DZIP1LQ8IYY4 767 aaKnown RBP20.5■□□□□ 0.87
CNKSR1-202ENST00000374253 NOB1Q9ULX3 412 aaKnown RBP20.5■□□□□ 0.87
CNKSR1-202ENST00000374253 ELL2O00472 640 aaPredicted RBP20.5■□□□□ 0.87
CNKSR1-202ENST00000374253 FAM83GA6ND36 823 aa20.49■□□□□ 0.87
CNKSR1-202ENST00000374253 NFE2L2Q16236 605 aa20.49■□□□□ 0.87
CNKSR1-202ENST00000374253 FAM161AQ3B820 660 aa20.49■□□□□ 0.87
CNKSR1-202ENST00000374253 ZNF692Q9BU19 519 aaPredicted RBP20.49■□□□□ 0.87
CNKSR1-202ENST00000374253 TTC21BQ7Z4L5 1316 aa20.49■□□□□ 0.87
CNKSR1-202ENST00000374253 C3P01024 1663 aa20.48■□□□□ 0.87
CNKSR1-202ENST00000374253 MVPQ14764 893 aaKnown RBP20.48■□□□□ 0.87
CNKSR1-202ENST00000374253 AEBP1Q8IUX7 1158 aa20.48■□□□□ 0.87
CNKSR1-202ENST00000374253 DCTN1Q14203 1278 aa20.48■□□□□ 0.87
CNKSR1-202ENST00000374253 ITPRIPQ8IWB1 547 aa20.48■□□□□ 0.87
CNKSR1-202ENST00000374253 MON2Q7Z3U7 1717 aa20.48■□□□□ 0.87
CNKSR1-202ENST00000374253 ITSN1Q15811 1721 aa20.47■□□□□ 0.87
CNKSR1-202ENST00000374253 IL16Q14005 1332 aa20.47■□□□□ 0.87
CNKSR1-202ENST00000374253 CDK12Q9NYV4 1490 aaPredicted RBP20.45■□□□□ 0.86
CNKSR1-202ENST00000374253 AATKQ6ZMQ8 1374 aa20.45■□□□□ 0.86
CNKSR1-202ENST00000374253 AKAP12Q02952 1782 aa20.45■□□□□ 0.86
CNKSR1-202ENST00000374253 TSPYL6Q8N831 410 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms