RNA–Protein interactions for RNA: ENST00000373960.3

DES-201, Transcript of desmin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DES, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DES-201ENST00000373960 VIRMAQ69YN4 1812 aaKnown RBP28.22■■■□□ 2.11
DES-201ENST00000373960 SPINK5Q9NQ38 1064 aaPredicted RBP28.21■■■□□ 2.11
DES-201ENST00000373960 DAXXQ9UER7 740 aaPredicted RBP28.21■■■□□ 2.11
DES-201ENST00000373960 ZNF335Q9H4Z2 1342 aaPredicted RBP28.19■■■□□ 2.1
DES-201ENST00000373960 E9PSI1 815 aa28.19■■■□□ 2.1
DES-201ENST00000373960 DIP2AQ14689 1571 aa28.19■■■□□ 2.1
DES-201ENST00000373960 CHD2O14647 1828 aaKnown RBP28.18■■■□□ 2.1
DES-201ENST00000373960 APAF1O14727 1248 aa28.17■■■□□ 2.1
DES-201ENST00000373960 CCDC146Q8IYE0 955 aa28.16■■■□□ 2.1
DES-201ENST00000373960 FRAT1Q92837 279 aaPredicted RBP28.16■■■□□ 2.1
DES-201ENST00000373960 SRPK2P78362 688 aaKnown RBP28.16■■■□□ 2.1
DES-201ENST00000373960 SLC24A1O60721 1099 aa28.14■■■□□ 2.1
DES-201ENST00000373960 BCAR3O75815 825 aa28.14■■■□□ 2.09
DES-201ENST00000373960 RGS3P49796 1198 aa28.14■■■□□ 2.09
DES-201ENST00000373960 C14orf37Q86TY3 774 aa28.14■■■□□ 2.09
DES-201ENST00000373960 PROSER2Q86WR7 435 aaPredicted RBP28.14■■■□□ 2.09
DES-201ENST00000373960 CDK19Q9BWU1 502 aa28.14■■■□□ 2.09
DES-201ENST00000373960 NINLQ9Y2I6 1382 aa28.14■■■□□ 2.09
DES-201ENST00000373960 STRCP1A6NGW2 1772 aa28.13■■■□□ 2.09
DES-201ENST00000373960 TECPR2O15040 1411 aa28.13■■■□□ 2.09
DES-201ENST00000373960 PDE3AQ14432 1141 aa28.12■■■□□ 2.09
DES-201ENST00000373960 XRN1Q8IZH2 1706 aaKnown RBP28.12■■■□□ 2.09
DES-201ENST00000373960 CPS1P31327 1500 aa28.12■■■□□ 2.09
DES-201ENST00000373960 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.12■■■□□ 2.09
DES-201ENST00000373960 DLC1Q96QB1 1528 aa28.11■■■□□ 2.09
DES-201ENST00000373960 TULP4Q9NRJ4 1543 aa28.11■■■□□ 2.09
DES-201ENST00000373960 KNDC1Q76NI1 1749 aa28.11■■■□□ 2.09
DES-201ENST00000373960 CGNL1Q0VF96 1302 aa28.11■■■□□ 2.09
DES-201ENST00000373960 PIK3R4Q99570 1358 aa28.1■■■□□ 2.09
DES-201ENST00000373960 USP19O94966 1318 aa28.09■■■□□ 2.09
DES-201ENST00000373960 EVC2Q86UK5 1308 aa28.09■■■□□ 2.09
DES-201ENST00000373960 IGHDP01880 384 aa28.09■■■□□ 2.09
DES-201ENST00000373960 FAM135BQ49AJ0 1406 aa28.08■■■□□ 2.09
DES-201ENST00000373960 DMRT2Q9Y5R5 561 aa28.07■■■□□ 2.08
DES-201ENST00000373960 SLC12A5Q9H2X9 1139 aa28.07■■■□□ 2.08
DES-201ENST00000373960 POLR3AO14802 1390 aaPredicted RBP28.07■■■□□ 2.08
DES-201ENST00000373960 FAM43AQ8N2R8 423 aa28.06■■■□□ 2.08
DES-201ENST00000373960 CARD14Q9BXL6 1004 aa28.06■■■□□ 2.08
DES-201ENST00000373960 WASLO00401 505 aaPredicted RBP28.05■■■□□ 2.08
DES-201ENST00000373960 RSPH6AQ9H0K4 717 aa28.05■■■□□ 2.08
DES-201ENST00000373960 PTCH1Q13635 1447 aa28.05■■■□□ 2.08
DES-201ENST00000373960 SIRT1Q96EB6 747 aa28.04■■■□□ 2.08
DES-201ENST00000373960 SBNO2Q9Y2G9 1366 aa28.04■■■□□ 2.08
DES-201ENST00000373960 MAPK8IP3Q9UPT6 1336 aa28.03■■■□□ 2.08
DES-201ENST00000373960 FRAT2O75474 233 aaPredicted RBP28.03■■■□□ 2.08
DES-201ENST00000373960 CLUAP1Q96AJ1 413 aa28.01■■■□□ 2.07
DES-201ENST00000373960 TMEM94Q12767 1356 aa28.01■■■□□ 2.07
DES-201ENST00000373960 WWC1Q8IX03 1113 aa28■■■□□ 2.07
DES-201ENST00000373960 SHPRHQ149N8 1683 aa27.99■■■□□ 2.07
DES-201ENST00000373960 PRR36Q9H6K5 1346 aa27.98■■■□□ 2.07
DES-201ENST00000373960 CABP1Q9NZU7 370 aa27.98■■■□□ 2.07
DES-201ENST00000373960 AAMPQ13685 434 aa27.98■■■□□ 2.07
DES-201ENST00000373960 NALCNQ8IZF0 1738 aa27.97■■■□□ 2.07
DES-201ENST00000373960 NUDT16Q96DE0 195 aaKnown RBP27.96■■■□□ 2.07
DES-201ENST00000373960 NWD1Q149M9 1564 aa27.96■■■□□ 2.07
DES-201ENST00000373960 PMFBP1Q8TBY8 1022 aa27.94■■■□□ 2.06
DES-201ENST00000373960 PANK1Q8TE04 598 aa27.94■■■□□ 2.06
DES-201ENST00000373960 PHF23Q9BUL5 403 aaPredicted RBP27.94■■■□□ 2.06
DES-201ENST00000373960 IQSEC2Q5JU85 1478 aa27.93■■■□□ 2.06
DES-201ENST00000373960 RGPD8O14715 1765 aaPredicted RBP27.92■■■□□ 2.06
DES-201ENST00000373960 EIF5BO60841 1220 aaKnown RBP27.92■■■□□ 2.06
DES-201ENST00000373960 COG6Q9Y2V7 657 aa27.92■■■□□ 2.06
DES-201ENST00000373960 SEC24BO95487 1268 aa27.92■■■□□ 2.06
DES-201ENST00000373960 RARSP54136 660 aaKnown RBP27.89■■■□□ 2.06
DES-201ENST00000373960 LRRC7Q96NW7 1537 aa27.88■■■□□ 2.05
DES-201ENST00000373960 BECN1Q14457 450 aa27.88■■■□□ 2.05
DES-201ENST00000373960 RUNDC1Q96C34 613 aa27.88■■■□□ 2.05
DES-201ENST00000373960 ADGRL3Q9HAR2 1447 aa27.88■■■□□ 2.05
DES-201ENST00000373960 XIRP1Q702N8 1843 aaKnown RBP27.86■■■□□ 2.05
DES-201ENST00000373960 CANXP27824 592 aaKnown RBP27.86■■■□□ 2.05
DES-201ENST00000373960 PPIP5K1Q6PFW1 1433 aa27.86■■■□□ 2.05
DES-201ENST00000373960 WDR63Q8IWG1 891 aa27.86■■■□□ 2.05
DES-201ENST00000373960 C19orf44Q9H6X5 657 aa27.86■■■□□ 2.05
DES-201ENST00000373960 USP32Q8NFA0 1604 aa27.86■■■□□ 2.05
DES-201ENST00000373960 CCDC61Q9Y6R9 512 aa27.86■■■□□ 2.05
DES-201ENST00000373960 NCBP3Q53F19 620 aaKnown RBP27.85■■■□□ 2.05
DES-201ENST00000373960 ORAI2Q96SN7 254 aa27.85■■■□□ 2.05
DES-201ENST00000373960 ATP7BP35670 1465 aa27.85■■■□□ 2.05
DES-201ENST00000373960 ESCO1Q5FWF5 840 aa27.84■■■□□ 2.05
DES-201ENST00000373960 ATAD2Q6PL18 1390 aa27.84■■■□□ 2.05
DES-201ENST00000373960 NSD3Q9BZ95 1437 aa27.84■■■□□ 2.05
DES-201ENST00000373960 CCDC27Q2M243 656 aa27.83■■■□□ 2.05
DES-201ENST00000373960 ADGRB2O60241 1585 aa27.83■■■□□ 2.05
DES-201ENST00000373960 ATF3P18847 181 aa27.82■■■□□ 2.04
DES-201ENST00000373960 ANTXR1Q9H6X2 564 aa27.82■■■□□ 2.04
DES-201ENST00000373960 PCDHB15Q9Y5E8 787 aa27.82■■■□□ 2.04
DES-201ENST00000373960 A0A1W2PP64 1363 aa27.81■■■□□ 2.04
DES-201ENST00000373960 MORC1Q86VD1 984 aa27.8■■■□□ 2.04
DES-201ENST00000373960 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.8■■■□□ 2.04
DES-201ENST00000373960 TCP11L2Q8N4U5 519 aa27.8■■■□□ 2.04
DES-201ENST00000373960 XPCQ01831 940 aaPredicted RBP27.8■■■□□ 2.04
DES-201ENST00000373960 DDX17Q92841 729 aaKnown RBP27.8■■■□□ 2.04
DES-201ENST00000373960 TBC1D32Q96NH3 1257 aa27.8■■■□□ 2.04
DES-201ENST00000373960 RLBP1P12271 317 aa27.79■■■□□ 2.04
DES-201ENST00000373960 ACEP12821 1306 aa27.78■■■□□ 2.04
DES-201ENST00000373960 MSH6P52701 1360 aa27.77■■■□□ 2.04
DES-201ENST00000373960 CD163L1Q9NR16 1453 aa27.77■■■□□ 2.04
DES-201ENST00000373960 FMN2Q9NZ56 1722 aa27.77■■■□□ 2.04
DES-201ENST00000373960 PDZRN3Q9UPQ7 1066 aa27.77■■■□□ 2.04
DES-201ENST00000373960 NGDNQ8NEJ9 315 aaKnown RBP27.76■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms