RNA–Protein interactions for RNA: ENST00000373800.7

EPB41-207, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best) BASIC

Gene EPB41, Length 2,853 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-207ENST00000373800 ARHGEF40Q8TER5 1519 aa13.16□□□□□ -0.3
EPB41-207ENST00000373800 U2SURPO15042 1029 aaKnown RBP13.16□□□□□ -0.3
EPB41-207ENST00000373800 PCDHB15Q9Y5E8 787 aa13.16□□□□□ -0.3
EPB41-207ENST00000373800 MVPQ14764 893 aaKnown RBP13.15□□□□□ -0.3
EPB41-207ENST00000373800 AGLP35573 1532 aa13.15□□□□□ -0.3
EPB41-207ENST00000373800 DLC1Q96QB1 1528 aa13.15□□□□□ -0.3
EPB41-207ENST00000373800 CDK19Q9BWU1 502 aa13.15□□□□□ -0.3
EPB41-207ENST00000373800 FBXO31Q5XUX0 539 aaPredicted RBP13.14□□□□□ -0.31
EPB41-207ENST00000373800 TRIM35Q9UPQ4 493 aa13.14□□□□□ -0.31
EPB41-207ENST00000373800 DIAPH1O60610 1272 aaKnown RBP13.14□□□□□ -0.31
EPB41-207ENST00000373800 BCL2L13Q9BXK5 485 aa13.14□□□□□ -0.31
EPB41-207ENST00000373800 DZIP1LQ8IYY4 767 aaKnown RBP13.14□□□□□ -0.31
EPB41-207ENST00000373800 STAG3Q9UJ98 1225 aa13.14□□□□□ -0.31
EPB41-207ENST00000373800 KIF20BQ96Q89 1820 aa13.13□□□□□ -0.31
EPB41-207ENST00000373800 FTSJ3Q8IY81 847 aaKnown RBP13.13□□□□□ -0.31
EPB41-207ENST00000373800 CDC42BPGQ6DT37 1551 aa13.13□□□□□ -0.31
EPB41-207ENST00000373800 SLC4A3P48751 1232 aa13.12□□□□□ -0.31
EPB41-207ENST00000373800 TNNQ9UQP3 1299 aa13.12□□□□□ -0.31
EPB41-207ENST00000373800 USP19O94966 1318 aa13.12□□□□□ -0.31
EPB41-207ENST00000373800 ATP7BP35670 1465 aa13.12□□□□□ -0.31
EPB41-207ENST00000373800 EXOSC9Q06265 439 aaKnown RBP13.12□□□□□ -0.31
EPB41-207ENST00000373800 CABP1Q9NZU7 370 aa13.12□□□□□ -0.31
EPB41-207ENST00000373800 FCHSD2O94868 740 aa13.11□□□□□ -0.31
EPB41-207ENST00000373800 TSR2Q969E8 191 aaKnown RBP13.11□□□□□ -0.31
EPB41-207ENST00000373800 NFKBIBQ15653 356 aa13.11□□□□□ -0.31
EPB41-207ENST00000373800 SMC4Q9NTJ3 1288 aa13.11□□□□□ -0.31
EPB41-207ENST00000373800 PDZRN3Q9UPQ7 1066 aa13.11□□□□□ -0.31
EPB41-207ENST00000373800 SPATA31D1Q6ZQQ2 1576 aa13.11□□□□□ -0.31
EPB41-207ENST00000373800 RIPK4P57078 832 aa13.1□□□□□ -0.31
EPB41-207ENST00000373800 A2ML1A8K2U0 1454 aa13.1□□□□□ -0.31
EPB41-207ENST00000373800 DDX19BQ9UMR2 479 aa13.1□□□□□ -0.31
EPB41-207ENST00000373800 FAM69CQ0P6D2 419 aa13.1□□□□□ -0.31
EPB41-207ENST00000373800 SSH1Q8WYL5 1049 aa13.09□□□□□ -0.31
EPB41-207ENST00000373800 SENP3Q9H4L4 574 aaPredicted RBP13.09□□□□□ -0.31
EPB41-207ENST00000373800 DIP2BQ9P265 1576 aa13.09□□□□□ -0.31
EPB41-207ENST00000373800 HDAC1Q13547 482 aaPredicted RBP13.09□□□□□ -0.31
EPB41-207ENST00000373800 BECN1Q14457 450 aa13.09□□□□□ -0.31
EPB41-207ENST00000373800 CYB5RLQ6IPT4 315 aa13.09□□□□□ -0.31
EPB41-207ENST00000373800 ATF7IPQ6VMQ6 1270 aa13.09□□□□□ -0.31
EPB41-207ENST00000373800 UPF2Q9HAU5 1272 aaKnown RBP13.09□□□□□ -0.31
EPB41-207ENST00000373800 RIMS2Q9UQ26 1411 aa13.09□□□□□ -0.31
EPB41-207ENST00000373800 IPO8O15397 1037 aaKnown RBP13.08□□□□□ -0.32
EPB41-207ENST00000373800 TRIM27P14373 513 aa13.08□□□□□ -0.32
EPB41-207ENST00000373800 ZNF428Q96B54 188 aa13.08□□□□□ -0.32
EPB41-207ENST00000373800 KIF16BQ96L93 1317 aa13.08□□□□□ -0.32
EPB41-207ENST00000373800 SETD1AO15047 1707 aaKnown RBP13.08□□□□□ -0.32
EPB41-207ENST00000373800 ALDH1L2Q3SY69 923 aa13.08□□□□□ -0.32
EPB41-207ENST00000373800 SEC24BO95487 1268 aa13.07□□□□□ -0.32
EPB41-207ENST00000373800 POLKQ9UBT6 870 aa13.06□□□□□ -0.32
EPB41-207ENST00000373800 FAM135BQ49AJ0 1406 aa13.06□□□□□ -0.32
EPB41-207ENST00000373800 RSPH6AQ9H0K4 717 aa13.06□□□□□ -0.32
EPB41-207ENST00000373800 NOB1Q9ULX3 412 aaKnown RBP13.06□□□□□ -0.32
EPB41-207ENST00000373800 RIMBP3CA6NJZ7 1639 aa13.06□□□□□ -0.32
EPB41-207ENST00000373800 RIMBP3BA6NNM3 1639 aa13.06□□□□□ -0.32
EPB41-207ENST00000373800 RIMBP3Q9UFD9 1639 aa13.06□□□□□ -0.32
EPB41-207ENST00000373800 BRPF1P55201 1214 aaPredicted RBP13.06□□□□□ -0.32
EPB41-207ENST00000373800 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.06□□□□□ -0.32
EPB41-207ENST00000373800 LRRC7Q96NW7 1537 aa13.06□□□□□ -0.32
EPB41-207ENST00000373800 PPIP5K1Q6PFW1 1433 aa13.05□□□□□ -0.32
EPB41-207ENST00000373800 CALD1Q05682 793 aaKnown RBP13.05□□□□□ -0.32
EPB41-207ENST00000373800 CPSF1Q10570 1443 aaKnown RBP13.05□□□□□ -0.32
EPB41-207ENST00000373800 EDC4Q6P2E9 1401 aaKnown RBP13.05□□□□□ -0.32
EPB41-207ENST00000373800 GSE1Q14687 1217 aa13.05□□□□□ -0.32
EPB41-207ENST00000373800 WAPLQ7Z5K2 1190 aa13.05□□□□□ -0.32
EPB41-207ENST00000373800 TBC1D32Q96NH3 1257 aa13.05□□□□□ -0.32
EPB41-207ENST00000373800 ITPRIPQ8IWB1 547 aa13.04□□□□□ -0.32
EPB41-207ENST00000373800 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.04□□□□□ -0.32
EPB41-207ENST00000373800 SIRT1Q96EB6 747 aa13.04□□□□□ -0.32
EPB41-207ENST00000373800 WASLO00401 505 aaPredicted RBP13.03□□□□□ -0.32
EPB41-207ENST00000373800 PRKAR2BP31323 418 aa13.03□□□□□ -0.32
EPB41-207ENST00000373800 NFE2L2Q16236 605 aa13.03□□□□□ -0.32
EPB41-207ENST00000373800 SMC5Q8IY18 1101 aa13.03□□□□□ -0.32
EPB41-207ENST00000373800 ZBTB40Q9NUA8 1239 aa13.03□□□□□ -0.32
EPB41-207ENST00000373800 AATKQ6ZMQ8 1374 aa13.03□□□□□ -0.32
EPB41-207ENST00000373800 MAP2P11137 1827 aaKnown RBP13.02□□□□□ -0.32
EPB41-207ENST00000373800 HDGFP51858 240 aaKnown RBP13.02□□□□□ -0.33
EPB41-207ENST00000373800 TMEM57Q8N5G2 664 aa13.02□□□□□ -0.33
EPB41-207ENST00000373800 CHMP4BQ9H444 224 aaKnown RBP13.02□□□□□ -0.33
EPB41-207ENST00000373800 CDK12Q9NYV4 1490 aaPredicted RBP13.02□□□□□ -0.33
EPB41-207ENST00000373800 NRXN3Q9Y4C0 1643 aa13.02□□□□□ -0.33
EPB41-207ENST00000373800 TSPOAP1O95153 1857 aa13.02□□□□□ -0.33
EPB41-207ENST00000373800 ARHGAP45Q92619 1136 aa13.01□□□□□ -0.33
EPB41-207ENST00000373800 KNDC1Q76NI1 1749 aa13.01□□□□□ -0.33
EPB41-207ENST00000373800 TECPR2O15040 1411 aa13□□□□□ -0.33
EPB41-207ENST00000373800 IL13P35225 146 aa13□□□□□ -0.33
EPB41-207ENST00000373800 GNAI1P63096 354 aa13□□□□□ -0.33
EPB41-207ENST00000373800 IFT57Q9NWB7 429 aa13□□□□□ -0.33
EPB41-207ENST00000373800 FRAT2O75474 233 aaPredicted RBP12.99□□□□□ -0.33
EPB41-207ENST00000373800 LMOD3Q0VAK6 560 aa12.99□□□□□ -0.33
EPB41-207ENST00000373800 CCDC61Q9Y6R9 512 aa12.99□□□□□ -0.33
EPB41-207ENST00000373800 METP08581 1390 aa12.99□□□□□ -0.33
EPB41-207ENST00000373800 NUDT16Q96DE0 195 aaKnown RBP12.99□□□□□ -0.33
EPB41-207ENST00000373800 PHACTR3Q96KR7 559 aa12.99□□□□□ -0.33
EPB41-207ENST00000373800 MON2Q7Z3U7 1717 aa12.98□□□□□ -0.33
EPB41-207ENST00000373800 VAMP4O75379 141 aa12.98□□□□□ -0.33
EPB41-207ENST00000373800 ZNF853P0CG23 659 aa12.98□□□□□ -0.33
EPB41-207ENST00000373800 COG3Q96JB2 828 aa12.98□□□□□ -0.33
EPB41-207ENST00000373800 ZNF692Q9BU19 519 aaPredicted RBP12.98□□□□□ -0.33
EPB41-207ENST00000373800 PIK3R4Q99570 1358 aa12.97□□□□□ -0.33
EPB41-207ENST00000373800 HMOX1P09601 288 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms