RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 API5Q9BZZ5 524 aaKnown RBP21.96■■□□□ 1.11
TRAF3IP1-201ENST00000373327 MAST1Q9Y2H9 1570 aa21.95■■□□□ 1.1
TRAF3IP1-201ENST00000373327 SLC4A2P04920 1241 aa21.94■■□□□ 1.1
TRAF3IP1-201ENST00000373327 GBP4Q96PP9 640 aa21.94■■□□□ 1.1
TRAF3IP1-201ENST00000373327 ATAD2Q6PL18 1390 aa21.94■■□□□ 1.1
TRAF3IP1-201ENST00000373327 HMMRO75330 724 aa21.93■■□□□ 1.1
TRAF3IP1-201ENST00000373327 FCHSD2O94868 740 aa21.93■■□□□ 1.1
TRAF3IP1-201ENST00000373327 CCDC61Q9Y6R9 512 aa21.93■■□□□ 1.1
TRAF3IP1-201ENST00000373327 L1TD1Q5T7N2 865 aaKnown RBP21.93■■□□□ 1.1
TRAF3IP1-201ENST00000373327 CSB-PGBD3P0DP91 1061 aa21.92■■□□□ 1.1
TRAF3IP1-201ENST00000373327 NFE2L2Q16236 605 aa21.92■■□□□ 1.1
TRAF3IP1-201ENST00000373327 PHACTR3Q96KR7 559 aa21.92■■□□□ 1.1
TRAF3IP1-201ENST00000373327 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.92■■□□□ 1.1
TRAF3IP1-201ENST00000373327 ATP10AO60312 1499 aa21.92■■□□□ 1.1
TRAF3IP1-201ENST00000373327 KRT24Q2M2I5 525 aa21.91■■□□□ 1.1
TRAF3IP1-201ENST00000373327 NAP1L2Q9ULW6 460 aaPredicted RBP21.91■■□□□ 1.1
TRAF3IP1-201ENST00000373327 XPCQ01831 940 aaPredicted RBP21.91■■□□□ 1.1
TRAF3IP1-201ENST00000373327 ARHGEF5Q12774 1597 aa21.91■■□□□ 1.1
TRAF3IP1-201ENST00000373327 PTMAP06454 111 aaKnown RBP21.9■■□□□ 1.1
TRAF3IP1-201ENST00000373327 CHD1LQ86WJ1 897 aa21.9■■□□□ 1.1
TRAF3IP1-201ENST00000373327 TSPYL6Q8N831 410 aa21.9■■□□□ 1.1
TRAF3IP1-201ENST00000373327 KDM5DQ9BY66 1539 aa21.9■■□□□ 1.1
TRAF3IP1-201ENST00000373327 SMARCA5O60264 1052 aaPredicted RBP21.9■■□□□ 1.1
TRAF3IP1-201ENST00000373327 CHMP5Q9NZZ3 219 aa21.89■■□□□ 1.1
TRAF3IP1-201ENST00000373327 AEBP1Q8IUX7 1158 aa21.89■■□□□ 1.09
TRAF3IP1-201ENST00000373327 ABTB2Q8N961 1025 aa21.89■■□□□ 1.09
TRAF3IP1-201ENST00000373327 A0A1W2PP64 1363 aa21.89■■□□□ 1.09
TRAF3IP1-201ENST00000373327 F6X3S4 739 aa21.88■■□□□ 1.09
TRAF3IP1-201ENST00000373327 ATP7AQ04656 1500 aa21.88■■□□□ 1.09
TRAF3IP1-201ENST00000373327 EIF2AK4Q9P2K8 1649 aaKnown RBP21.88■■□□□ 1.09
TRAF3IP1-201ENST00000373327 PIK3C2GO75747 1445 aa21.87■■□□□ 1.09
TRAF3IP1-201ENST00000373327 TBC1D2Q9BYX2 928 aa21.87■■□□□ 1.09
TRAF3IP1-201ENST00000373327 DDX49Q9Y6V7 483 aaKnown RBP21.87■■□□□ 1.09
TRAF3IP1-201ENST00000373327 BLMP54132 1417 aaPredicted RBP21.87■■□□□ 1.09
TRAF3IP1-201ENST00000373327 USHBP1Q8N6Y0 703 aa21.86■■□□□ 1.09
TRAF3IP1-201ENST00000373327 WASLO00401 505 aaPredicted RBP21.86■■□□□ 1.09
TRAF3IP1-201ENST00000373327 ZNF518AQ6AHZ1 1483 aa21.86■■□□□ 1.09
TRAF3IP1-201ENST00000373327 POLR3AO14802 1390 aaPredicted RBP21.86■■□□□ 1.09
TRAF3IP1-201ENST00000373327 ANO2Q9NQ90 1003 aa21.86■■□□□ 1.09
TRAF3IP1-201ENST00000373327 KDM2BQ8NHM5 1336 aa21.85■■□□□ 1.09
TRAF3IP1-201ENST00000373327 TEFQ10587 303 aa21.85■■□□□ 1.09
TRAF3IP1-201ENST00000373327 POLKQ9UBT6 870 aa21.85■■□□□ 1.09
TRAF3IP1-201ENST00000373327 CHD1O14646 1710 aa21.85■■□□□ 1.09
TRAF3IP1-201ENST00000373327 MCCP23508 829 aa21.85■■□□□ 1.09
TRAF3IP1-201ENST00000373327 ZMYM4Q5VZL5 1548 aa21.85■■□□□ 1.09
TRAF3IP1-201ENST00000373327 ANKRD36BQ8N2N9 1353 aa21.85■■□□□ 1.09
TRAF3IP1-201ENST00000373327 PSME1Q06323 249 aa21.84■■□□□ 1.09
TRAF3IP1-201ENST00000373327 MBIPQ9NS73 344 aa21.84■■□□□ 1.09
TRAF3IP1-201ENST00000373327 MYO5CQ9NQX4 1742 aa21.84■■□□□ 1.09
TRAF3IP1-201ENST00000373327 HSP90AB2PQ58FF8 381 aa21.83■■□□□ 1.09
TRAF3IP1-201ENST00000373327 CHMP3Q9Y3E7 222 aa21.83■■□□□ 1.09
TRAF3IP1-201ENST00000373327 FGD1P98174 961 aa21.83■■□□□ 1.08
TRAF3IP1-201ENST00000373327 KIAA1211Q6ZU35 1233 aa21.83■■□□□ 1.08
TRAF3IP1-201ENST00000373327 AIMP1Q12904 312 aaKnown RBP21.82■■□□□ 1.08
TRAF3IP1-201ENST00000373327 PREX2Q70Z35 1606 aa21.82■■□□□ 1.08
TRAF3IP1-201ENST00000373327 EXOC6BQ9Y2D4 811 aa21.82■■□□□ 1.08
TRAF3IP1-201ENST00000373327 C8orf58Q8NAV2 365 aa21.81■■□□□ 1.08
TRAF3IP1-201ENST00000373327 PTPRTO14522 1441 aa21.81■■□□□ 1.08
TRAF3IP1-201ENST00000373327 MAP4K4O95819 1239 aaPredicted RBP21.81■■□□□ 1.08
TRAF3IP1-201ENST00000373327 TSHZ3Q63HK5 1081 aa21.8■■□□□ 1.08
TRAF3IP1-201ENST00000373327 NPATQ14207 1427 aa21.8■■□□□ 1.08
TRAF3IP1-201ENST00000373327 TRAK2O60296 914 aa21.8■■□□□ 1.08
TRAF3IP1-201ENST00000373327 AAMPQ13685 434 aa21.8■■□□□ 1.08
TRAF3IP1-201ENST00000373327 ST18O60284 1047 aa21.8■■□□□ 1.08
TRAF3IP1-201ENST00000373327 CDC45O75419 566 aa21.79■■□□□ 1.08
TRAF3IP1-201ENST00000373327 ARID3AQ99856 593 aa21.79■■□□□ 1.08
TRAF3IP1-201ENST00000373327 NINLQ9Y2I6 1382 aa21.78■■□□□ 1.08
TRAF3IP1-201ENST00000373327 ESCO1Q5FWF5 840 aa21.78■■□□□ 1.08
TRAF3IP1-201ENST00000373327 CDC42BPBQ9Y5S2 1711 aa21.78■■□□□ 1.08
TRAF3IP1-201ENST00000373327 IL1RAPL2Q9NP60 686 aa21.77■■□□□ 1.08
TRAF3IP1-201ENST00000373327 TRIM35Q9UPQ4 493 aa21.77■■□□□ 1.08
TRAF3IP1-201ENST00000373327 MCTP1Q6DN14 999 aa21.77■■□□□ 1.08
TRAF3IP1-201ENST00000373327 DNTTIP2Q5QJE6 756 aaKnown RBP21.77■■□□□ 1.08
TRAF3IP1-201ENST00000373327 ERVK-7P63135 1459 aa21.77■■□□□ 1.08
TRAF3IP1-201ENST00000373327 CT47B1P0C2W7 299 aaPredicted RBP21.76■■□□□ 1.07
TRAF3IP1-201ENST00000373327 FOXO3O43524 673 aa21.75■■□□□ 1.07
TRAF3IP1-201ENST00000373327 ZNF521Q96K83 1311 aa21.75■■□□□ 1.07
TRAF3IP1-201ENST00000373327 RBM42Q9BTD8 480 aaKnown RBP21.75■■□□□ 1.07
TRAF3IP1-201ENST00000373327 DDX11L8A8MPP1 907 aa21.75■■□□□ 1.07
TRAF3IP1-201ENST00000373327 C16orf71Q8IYS4 520 aaPredicted RBP21.75■■□□□ 1.07
TRAF3IP1-201ENST00000373327 ZNF692Q9BU19 519 aaPredicted RBP21.75■■□□□ 1.07
TRAF3IP1-201ENST00000373327 ANO8Q9HCE9 1232 aaPredicted RBP21.75■■□□□ 1.07
TRAF3IP1-201ENST00000373327 C9orf78Q9NZ63 289 aaPredicted RBP21.75■■□□□ 1.07
TRAF3IP1-201ENST00000373327 GCC1Q96CN9 775 aa21.75■■□□□ 1.07
TRAF3IP1-201ENST00000373327 SURF6O75683 361 aaKnown RBP21.74■■□□□ 1.07
TRAF3IP1-201ENST00000373327 INTS3Q68E01 1043 aaKnown RBP21.73■■□□□ 1.07
TRAF3IP1-201ENST00000373327 ACEP12821 1306 aa21.73■■□□□ 1.07
TRAF3IP1-201ENST00000373327 TBC1D32Q96NH3 1257 aa21.73■■□□□ 1.07
TRAF3IP1-201ENST00000373327 C1orf141Q5JVX7 400 aa21.72■■□□□ 1.07
TRAF3IP1-201ENST00000373327 AMOTL2Q9Y2J4 779 aa21.72■■□□□ 1.07
TRAF3IP1-201ENST00000373327 NEK4P51957 841 aa21.72■■□□□ 1.07
TRAF3IP1-201ENST00000373327 ABCC1P33527 1531 aa21.72■■□□□ 1.07
TRAF3IP1-201ENST00000373327 ADCY10Q96PN6 1610 aa21.72■■□□□ 1.07
TRAF3IP1-201ENST00000373327 HDGFL1Q5TGJ6 251 aa21.72■■□□□ 1.07
TRAF3IP1-201ENST00000373327 MCM4P33991 863 aa21.71■■□□□ 1.07
TRAF3IP1-201ENST00000373327 UBTFL1P0CB47 393 aaPredicted RBP21.71■■□□□ 1.07
TRAF3IP1-201ENST00000373327 PRDM15P57071 1507 aaPredicted RBP21.71■■□□□ 1.07
TRAF3IP1-201ENST00000373327 REC8O95072 547 aa21.7■■□□□ 1.06
TRAF3IP1-201ENST00000373327 ZCCHC11Q5TAX3 1644 aaKnown RBP21.7■■□□□ 1.06
TRAF3IP1-201ENST00000373327 CROCC2H7BZ55 1655 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms