RNA–Protein interactions for RNA: ENST00000372317.7

CALCOCO2-202, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 462 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-202ENST00000372317 TRPM3Q9HCF6 1732 aaPredicted RBP15.71■□□□□ 0.1
CALCOCO2-202ENST00000372317 TTC21BQ7Z4L5 1316 aa15.7■□□□□ 0.1
CALCOCO2-202ENST00000372317 BRINP3Q76B58 766 aa15.7■□□□□ 0.1
CALCOCO2-202ENST00000372317 SLAIN2Q9P270 581 aa15.7■□□□□ 0.1
CALCOCO2-202ENST00000372317 NME9Q86XW9 330 aa15.69■□□□□ 0.1
CALCOCO2-202ENST00000372317 PXDNQ92626 1479 aa15.69■□□□□ 0.1
CALCOCO2-202ENST00000372317 ROBO1Q9Y6N7 1651 aa15.69■□□□□ 0.1
CALCOCO2-202ENST00000372317 NHSL1Q5SYE7 1610 aa15.68■□□□□ 0.1
CALCOCO2-202ENST00000372317 BRD4O60885 1362 aaPredicted RBP15.68■□□□□ 0.1
CALCOCO2-202ENST00000372317 FOXO3O43524 673 aa15.68■□□□□ 0.1
CALCOCO2-202ENST00000372317 XPCQ01831 940 aaPredicted RBP15.68■□□□□ 0.1
CALCOCO2-202ENST00000372317 OVOS2A0A0J9YW53 1432 aa15.68■□□□□ 0.1
CALCOCO2-202ENST00000372317 OVOS2Q6IE36 1432 aa15.68■□□□□ 0.1
CALCOCO2-202ENST00000372317 TTC21AQ8NDW8 1320 aa15.68■□□□□ 0.1
CALCOCO2-202ENST00000372317 FYB1O15117 783 aa15.67■□□□□ 0.1
CALCOCO2-202ENST00000372317 RALBP1Q15311 655 aa15.67■□□□□ 0.1
CALCOCO2-202ENST00000372317 GGNBP2Q9H3C7 697 aa15.67■□□□□ 0.1
CALCOCO2-202ENST00000372317 NPHP3Q7Z494 1330 aa15.67■□□□□ 0.1
CALCOCO2-202ENST00000372317 USP54Q70EL1 1684 aa15.67■□□□□ 0.1
CALCOCO2-202ENST00000372317 PSME1Q06323 249 aa15.66■□□□□ 0.1
CALCOCO2-202ENST00000372317 DDX17Q92841 729 aaKnown RBP15.66■□□□□ 0.1
CALCOCO2-202ENST00000372317 ZRANB1Q9UGI0 708 aa15.65■□□□□ 0.1
CALCOCO2-202ENST00000372317 MARF1Q9Y4F3 1742 aaKnown RBP15.65■□□□□ 0.1
CALCOCO2-202ENST00000372317 MYBBP1AQ9BQG0 1328 aaKnown RBP15.65■□□□□ 0.1
CALCOCO2-202ENST00000372317 AHDC1Q5TGY3 1603 aaPredicted RBP15.65■□□□□ 0.1
CALCOCO2-202ENST00000372317 ALS2Q96Q42 1657 aa15.64■□□□□ 0.09
CALCOCO2-202ENST00000372317 PAK3O75914 559 aaPredicted RBP15.64■□□□□ 0.09
CALCOCO2-202ENST00000372317 TNS3Q68CZ2 1445 aa15.64■□□□□ 0.09
CALCOCO2-202ENST00000372317 MORC1Q86VD1 984 aa15.64■□□□□ 0.09
CALCOCO2-202ENST00000372317 CERKQ8TCT0 537 aa15.64■□□□□ 0.09
CALCOCO2-202ENST00000372317 SBNO1A3KN83 1393 aa15.63■□□□□ 0.09
CALCOCO2-202ENST00000372317 KRT28Q7Z3Y7 464 aa15.63■□□□□ 0.09
CALCOCO2-202ENST00000372317 USP31Q70CQ4 1352 aa15.62■□□□□ 0.09
CALCOCO2-202ENST00000372317 UBAP1LF5GYI3 381 aa15.61■□□□□ 0.09
CALCOCO2-202ENST00000372317 PPP2R1AP30153 589 aa15.61■□□□□ 0.09
CALCOCO2-202ENST00000372317 TNNT2P45379 298 aaPredicted RBP15.61■□□□□ 0.09
CALCOCO2-202ENST00000372317 PIAS4Q8N2W9 510 aaPredicted RBP15.61■□□□□ 0.09
CALCOCO2-202ENST00000372317 COG3Q96JB2 828 aa15.61■□□□□ 0.09
CALCOCO2-202ENST00000372317 CCER2I3L3R5 266 aa15.6■□□□□ 0.09
CALCOCO2-202ENST00000372317 TOM1O60784 492 aa15.6■□□□□ 0.09
CALCOCO2-202ENST00000372317 NUTM2GQ5VZR2 741 aa15.6■□□□□ 0.09
CALCOCO2-202ENST00000372317 MED1Q15648 1581 aaPredicted RBP15.6■□□□□ 0.09
CALCOCO2-202ENST00000372317 SOS2Q07890 1332 aaPredicted RBP15.6■□□□□ 0.09
CALCOCO2-202ENST00000372317 SLIT3O75094 1523 aa15.59■□□□□ 0.09
CALCOCO2-202ENST00000372317 NLRP13Q86W25 1043 aa15.59■□□□□ 0.09
CALCOCO2-202ENST00000372317 ABTB2Q8N961 1025 aa15.59■□□□□ 0.09
CALCOCO2-202ENST00000372317 SCAF1Q9H7N4 1312 aaKnown RBP15.59■□□□□ 0.09
CALCOCO2-202ENST00000372317 PIP4K2BP78356 416 aa15.58■□□□□ 0.08
CALCOCO2-202ENST00000372317 CCDC184Q52MB2 194 aa15.58■□□□□ 0.08
CALCOCO2-202ENST00000372317 SMG6Q86US8 1419 aaKnown RBP15.58■□□□□ 0.08
CALCOCO2-202ENST00000372317 NFAT5O94916 1531 aa15.58■□□□□ 0.08
CALCOCO2-202ENST00000372317 COL16A1Q07092 1604 aaPredicted RBP15.57■□□□□ 0.08
CALCOCO2-202ENST00000372317 NLRP6P59044 892 aa15.57■□□□□ 0.08
CALCOCO2-202ENST00000372317 LMOD2Q6P5Q4 547 aa15.57■□□□□ 0.08
CALCOCO2-202ENST00000372317 MRS2Q9HD23 443 aa15.57■□□□□ 0.08
CALCOCO2-202ENST00000372317 SPATA31A3Q5VYP0 1347 aa15.57■□□□□ 0.08
CALCOCO2-202ENST00000372317 ARHGEF10O15013 1369 aa15.57■□□□□ 0.08
CALCOCO2-202ENST00000372317 PHRF1Q9P1Y6 1649 aaKnown RBP15.57■□□□□ 0.08
CALCOCO2-202ENST00000372317 CRYBG1Q9Y4K1 1723 aa15.57■□□□□ 0.08
CALCOCO2-202ENST00000372317 USP19O94966 1318 aa15.56■□□□□ 0.08
CALCOCO2-202ENST00000372317 AATKQ6ZMQ8 1374 aa15.56■□□□□ 0.08
CALCOCO2-202ENST00000372317 PHLPP1O60346 1717 aa15.56■□□□□ 0.08
CALCOCO2-202ENST00000372317 SOX12O15370 315 aa15.55■□□□□ 0.08
CALCOCO2-202ENST00000372317 ABCA3Q99758 1704 aa15.54■□□□□ 0.08
CALCOCO2-202ENST00000372317 CDK12Q9NYV4 1490 aaPredicted RBP15.54■□□□□ 0.08
CALCOCO2-202ENST00000372317 PEAK1Q9H792 1746 aa15.54■□□□□ 0.08
CALCOCO2-202ENST00000372317 COL3A1P02461 1466 aaPredicted RBP15.53■□□□□ 0.08
CALCOCO2-202ENST00000372317 PLEKHG5O94827 1062 aa15.53■□□□□ 0.08
CALCOCO2-202ENST00000372317 FBLN1P23142 703 aa15.53■□□□□ 0.08
CALCOCO2-202ENST00000372317 MTHFSP49914 203 aa15.52■□□□□ 0.08
CALCOCO2-202ENST00000372317 RRS1Q15050 365 aaKnown RBP15.52■□□□□ 0.08
CALCOCO2-202ENST00000372317 EMILIN1Q9Y6C2 1016 aa15.52■□□□□ 0.08
CALCOCO2-202ENST00000372317 POLKQ9UBT6 870 aa15.51■□□□□ 0.07
CALCOCO2-202ENST00000372317 SHPRHQ149N8 1683 aa15.51■□□□□ 0.07
CALCOCO2-202ENST00000372317 COL22A1Q8NFW1 1626 aaPredicted RBP15.5■□□□□ 0.07
CALCOCO2-202ENST00000372317 PNPLA6Q8IY17 1366 aa15.49■□□□□ 0.07
CALCOCO2-202ENST00000372317 LTN1O94822 1766 aa15.49■□□□□ 0.07
CALCOCO2-202ENST00000372317 MAP3K19Q56UN5 1328 aa15.49■□□□□ 0.07
CALCOCO2-202ENST00000372317 RTL1A6NKG5 1358 aa15.49■□□□□ 0.07
CALCOCO2-202ENST00000372317 PPM1GO15355 546 aaPredicted RBP15.48■□□□□ 0.07
CALCOCO2-202ENST00000372317 KCNH5Q8NCM2 988 aa15.48■□□□□ 0.07
CALCOCO2-202ENST00000372317 CABLES1Q8TDN4 633 aa15.48■□□□□ 0.07
CALCOCO2-202ENST00000372317 CFAP53Q96M91 514 aa15.48■□□□□ 0.07
CALCOCO2-202ENST00000372317 FLT4P35916 1363 aa15.48■□□□□ 0.07
CALCOCO2-202ENST00000372317 MAP2P11137 1827 aaKnown RBP15.47■□□□□ 0.07
CALCOCO2-202ENST00000372317 GCP02774 474 aa15.47■□□□□ 0.07
CALCOCO2-202ENST00000372317 LRRC59Q96AG4 307 aaKnown RBP15.46■□□□□ 0.07
CALCOCO2-202ENST00000372317 INSRP06213 1382 aa15.46■□□□□ 0.07
CALCOCO2-202ENST00000372317 KIF24Q5T7B8 1368 aa15.46■□□□□ 0.07
CALCOCO2-202ENST00000372317 ZBTB7CA1YPR0 619 aa15.45■□□□□ 0.06
CALCOCO2-202ENST00000372317 PNISRQ8TF01 805 aaKnown RBP15.44■□□□□ 0.06
CALCOCO2-202ENST00000372317 ABCC6O95255 1503 aa15.43■□□□□ 0.06
CALCOCO2-202ENST00000372317 AMPHP49418 695 aa15.43■□□□□ 0.06
CALCOCO2-202ENST00000372317 FAM9BQ8IZU0 186 aa15.43■□□□□ 0.06
CALCOCO2-202ENST00000372317 CPDO75976 1380 aa15.43■□□□□ 0.06
CALCOCO2-202ENST00000372317 KIAA0232Q92628 1395 aa15.43■□□□□ 0.06
CALCOCO2-202ENST00000372317 HOXC9P31274 260 aa15.42■□□□□ 0.06
CALCOCO2-202ENST00000372317 HAP1P54257 671 aaPredicted RBP15.42■□□□□ 0.06
CALCOCO2-202ENST00000372317 ZC3H6P61129 1189 aaKnown RBP15.42■□□□□ 0.06
CALCOCO2-202ENST00000372317 WDR43Q15061 677 aaKnown RBP eCLIP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms