RNA–Protein interactions for RNA: ENST00000372105.3

LRIT1-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRIT1, Length 2,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1-201ENST00000372105 SLC26A8Q96RN1 970 aa20.55■□□□□ 0.88
LRIT1-201ENST00000372105 SLFN5Q08AF3 891 aa20.55■□□□□ 0.88
LRIT1-201ENST00000372105 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.55■□□□□ 0.88
LRIT1-201ENST00000372105 FRAT2O75474 233 aaPredicted RBP20.54■□□□□ 0.88
LRIT1-201ENST00000372105 UBE2Q2Q8WVN8 375 aa20.54■□□□□ 0.88
LRIT1-201ENST00000372105 VIRMAQ69YN4 1812 aaKnown RBP20.54■□□□□ 0.88
LRIT1-201ENST00000372105 A0A1W2PP64 1363 aa20.53■□□□□ 0.88
LRIT1-201ENST00000372105 RSPH6AQ9H0K4 717 aa20.53■□□□□ 0.88
LRIT1-201ENST00000372105 CGNL1Q0VF96 1302 aa20.52■□□□□ 0.88
LRIT1-201ENST00000372105 ROBO2Q9HCK4 1378 aa20.52■□□□□ 0.87
LRIT1-201ENST00000372105 NGEFQ8N5V2 710 aa20.51■□□□□ 0.87
LRIT1-201ENST00000372105 TBX22Q9Y458 520 aa20.51■□□□□ 0.87
LRIT1-201ENST00000372105 PTPRUQ92729 1446 aa20.5■□□□□ 0.87
LRIT1-201ENST00000372105 WASLO00401 505 aaPredicted RBP20.5■□□□□ 0.87
LRIT1-201ENST00000372105 MORC1Q86VD1 984 aa20.5■□□□□ 0.87
LRIT1-201ENST00000372105 TERF2IPQ9NYB0 399 aa20.5■□□□□ 0.87
LRIT1-201ENST00000372105 NKTRP30414 1462 aaKnown RBP20.5■□□□□ 0.87
LRIT1-201ENST00000372105 CD163L1Q9NR16 1453 aa20.5■□□□□ 0.87
LRIT1-201ENST00000372105 ZNF142P52746 1687 aaPredicted RBP20.5■□□□□ 0.87
LRIT1-201ENST00000372105 CABP1Q9NZU7 370 aa20.49■□□□□ 0.87
LRIT1-201ENST00000372105 DIP2AQ14689 1571 aa20.48■□□□□ 0.87
LRIT1-201ENST00000372105 MAPK8IP3Q9UPT6 1336 aa20.47■□□□□ 0.87
LRIT1-201ENST00000372105 RGS3P49796 1198 aa20.47■□□□□ 0.87
LRIT1-201ENST00000372105 HDGFL2Q7Z4V5 671 aaPredicted RBP20.47■□□□□ 0.87
LRIT1-201ENST00000372105 NSD2O96028 1365 aa20.47■□□□□ 0.87
LRIT1-201ENST00000372105 USP19O94966 1318 aa20.46■□□□□ 0.87
LRIT1-201ENST00000372105 BECN1Q14457 450 aa20.46■□□□□ 0.87
LRIT1-201ENST00000372105 AMOTL2Q9Y2J4 779 aa20.46■□□□□ 0.87
LRIT1-201ENST00000372105 SETD1BQ9UPS6 1966 aaKnown RBP20.45■□□□□ 0.86
LRIT1-201ENST00000372105 TNNT2P45379 298 aaPredicted RBP20.45■□□□□ 0.86
LRIT1-201ENST00000372105 PDE3AQ14432 1141 aa20.45■□□□□ 0.86
LRIT1-201ENST00000372105 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.44■□□□□ 0.86
LRIT1-201ENST00000372105 E9PSI1 815 aa20.43■□□□□ 0.86
LRIT1-201ENST00000372105 ATP7BP35670 1465 aa20.43■□□□□ 0.86
LRIT1-201ENST00000372105 ANKLE2Q86XL3 938 aa20.43■□□□□ 0.86
LRIT1-201ENST00000372105 ADGRB2O60241 1585 aa20.42■□□□□ 0.86
LRIT1-201ENST00000372105 AAMPQ13685 434 aa20.42■□□□□ 0.86
LRIT1-201ENST00000372105 NUDT16Q96DE0 195 aaKnown RBP20.42■□□□□ 0.86
LRIT1-201ENST00000372105 PPIP5K1Q6PFW1 1433 aa20.42■□□□□ 0.86
LRIT1-201ENST00000372105 L1TD1Q5T7N2 865 aaKnown RBP20.41■□□□□ 0.86
LRIT1-201ENST00000372105 PTCH1Q13635 1447 aa20.4■□□□□ 0.86
LRIT1-201ENST00000372105 GGNBP2Q9H3C7 697 aa20.4■□□□□ 0.86
LRIT1-201ENST00000372105 POLR3AO14802 1390 aaPredicted RBP20.4■□□□□ 0.86
LRIT1-201ENST00000372105 XRN1Q8IZH2 1706 aaKnown RBP20.39■□□□□ 0.85
LRIT1-201ENST00000372105 FYB1O15117 783 aa20.39■□□□□ 0.85
LRIT1-201ENST00000372105 NCKAP5LQ9HCH0 1330 aa20.39■□□□□ 0.85
LRIT1-201ENST00000372105 CCDC61Q9Y6R9 512 aa20.38■□□□□ 0.85
LRIT1-201ENST00000372105 ANKRD26Q9UPS8 1709 aa20.38■□□□□ 0.85
LRIT1-201ENST00000372105 PRR36Q9H6K5 1346 aa20.37■□□□□ 0.85
LRIT1-201ENST00000372105 CPSF1Q10570 1443 aaKnown RBP20.37■□□□□ 0.85
LRIT1-201ENST00000372105 KIF20BQ96Q89 1820 aa20.37■□□□□ 0.85
LRIT1-201ENST00000372105 PIK3R4Q99570 1358 aa20.37■□□□□ 0.85
LRIT1-201ENST00000372105 IGHDP01880 384 aa20.37■□□□□ 0.85
LRIT1-201ENST00000372105 MTHFSP49914 203 aa20.36■□□□□ 0.85
LRIT1-201ENST00000372105 CDC42BPGQ6DT37 1551 aa20.36■□□□□ 0.85
LRIT1-201ENST00000372105 CLUAP1Q96AJ1 413 aa20.36■□□□□ 0.85
LRIT1-201ENST00000372105 EIF5BO60841 1220 aaKnown RBP20.34■□□□□ 0.85
LRIT1-201ENST00000372105 BCAR3O75815 825 aa20.34■□□□□ 0.85
LRIT1-201ENST00000372105 KCNA6P17658 529 aa20.34■□□□□ 0.85
LRIT1-201ENST00000372105 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.34■□□□□ 0.85
LRIT1-201ENST00000372105 ANTXR1Q9H6X2 564 aa20.34■□□□□ 0.85
LRIT1-201ENST00000372105 SPINK5Q9NQ38 1064 aaPredicted RBP20.34■□□□□ 0.85
LRIT1-201ENST00000372105 APAF1O14727 1248 aa20.33■□□□□ 0.85
LRIT1-201ENST00000372105 EDC4Q6P2E9 1401 aaKnown RBP20.32■□□□□ 0.84
LRIT1-201ENST00000372105 SHPRHQ149N8 1683 aa20.32■□□□□ 0.84
LRIT1-201ENST00000372105 ITSN1Q15811 1721 aa20.32■□□□□ 0.84
LRIT1-201ENST00000372105 NUTM2FA1L443 756 aa20.32■□□□□ 0.84
LRIT1-201ENST00000372105 CFAP53Q96M91 514 aa20.32■□□□□ 0.84
LRIT1-201ENST00000372105 TOPAZ1Q8N9V7 1692 aa20.31■□□□□ 0.84
LRIT1-201ENST00000372105 AKAP12Q02952 1782 aa20.31■□□□□ 0.84
LRIT1-201ENST00000372105 MON2Q7Z3U7 1717 aa20.31■□□□□ 0.84
LRIT1-201ENST00000372105 PMFBP1Q8TBY8 1022 aa20.31■□□□□ 0.84
LRIT1-201ENST00000372105 CCDC146Q8IYE0 955 aa20.3■□□□□ 0.84
LRIT1-201ENST00000372105 UPF2Q9HAU5 1272 aaKnown RBP20.3■□□□□ 0.84
LRIT1-201ENST00000372105 CHD2O14647 1828 aaKnown RBP20.3■□□□□ 0.84
LRIT1-201ENST00000372105 NPHP4O75161 1426 aaPredicted RBP20.3■□□□□ 0.84
LRIT1-201ENST00000372105 SEC24BO95487 1268 aa20.29■□□□□ 0.84
LRIT1-201ENST00000372105 ZNF692Q9BU19 519 aaPredicted RBP20.29■□□□□ 0.84
LRIT1-201ENST00000372105 TBC1D32Q96NH3 1257 aa20.28■□□□□ 0.84
LRIT1-201ENST00000372105 PLEKHG3A1L390 1219 aa20.27■□□□□ 0.84
LRIT1-201ENST00000372105 NME9Q86XW9 330 aa20.26■□□□□ 0.83
LRIT1-201ENST00000372105 ACEP12821 1306 aa20.25■□□□□ 0.83
LRIT1-201ENST00000372105 FSD2A1L4K1 749 aa20.23■□□□□ 0.83
LRIT1-201ENST00000372105 SLKQ9H2G2 1235 aaPredicted RBP20.23■□□□□ 0.83
LRIT1-201ENST00000372105 ZRANB1Q9UGI0 708 aa20.23■□□□□ 0.83
LRIT1-201ENST00000372105 CANXP27824 592 aaKnown RBP20.23■□□□□ 0.83
LRIT1-201ENST00000372105 RRAGDQ9NQL2 400 aaPredicted RBP20.23■□□□□ 0.83
LRIT1-201ENST00000372105 COG6Q9Y2V7 657 aa20.23■□□□□ 0.83
LRIT1-201ENST00000372105 RGPD8O14715 1765 aaPredicted RBP20.22■□□□□ 0.83
LRIT1-201ENST00000372105 WWC1Q8IX03 1113 aa20.22■□□□□ 0.83
LRIT1-201ENST00000372105 TBC1D2Q9BYX2 928 aa20.22■□□□□ 0.83
LRIT1-201ENST00000372105 NRKQ7Z2Y5 1582 aa20.22■□□□□ 0.83
LRIT1-201ENST00000372105 COL3A1P02461 1466 aaPredicted RBP20.21■□□□□ 0.83
LRIT1-201ENST00000372105 PANK1Q8TE04 598 aa20.21■□□□□ 0.83
LRIT1-201ENST00000372105 DMRT2Q9Y5R5 561 aa20.21■□□□□ 0.83
LRIT1-201ENST00000372105 FMN2Q9NZ56 1722 aa20.2■□□□□ 0.82
LRIT1-201ENST00000372105 USP6P35125 1406 aa20.2■□□□□ 0.82
LRIT1-201ENST00000372105 FBLN1P23142 703 aa20.2■□□□□ 0.82
LRIT1-201ENST00000372105 COG3Q96JB2 828 aa20.2■□□□□ 0.82
LRIT1-201ENST00000372105 NALCNQ8IZF0 1738 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms