RNA–Protein interactions for RNA: ENST00000371015.5

PHACTR3-204, Transcript of phosphatase and actin regulator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHACTR3, Length 2,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-204ENST00000371015 NPC1L1Q9UHC9 1359 aa19.61■□□□□ 0.73
PHACTR3-204ENST00000371015 APPP05067 770 aa19.61■□□□□ 0.73
PHACTR3-204ENST00000371015 CHAF1AQ13111 956 aaPredicted RBP19.61■□□□□ 0.73
PHACTR3-204ENST00000371015 CARD11Q9BXL7 1154 aa19.61■□□□□ 0.73
PHACTR3-204ENST00000371015 MFAP1P55081 439 aaKnown RBP19.6■□□□□ 0.73
PHACTR3-204ENST00000371015 CTR9Q6PD62 1173 aa19.6■□□□□ 0.73
PHACTR3-204ENST00000371015 NOLC1Q14978 699 aaKnown RBP eCLIP19.6■□□□□ 0.73
PHACTR3-204ENST00000371015 TRMT2AQ8IZ69 625 aaKnown RBP19.6■□□□□ 0.73
PHACTR3-204ENST00000371015 SPTLC3Q9NUV7 552 aa19.6■□□□□ 0.73
PHACTR3-204ENST00000371015 FKBP5Q13451 457 aaPredicted RBP19.59■□□□□ 0.73
PHACTR3-204ENST00000371015 SHANK2Q9UPX8 1470 aa19.59■□□□□ 0.73
PHACTR3-204ENST00000371015 TRIM6-TRIM34B2RNG4 842 aa19.59■□□□□ 0.73
PHACTR3-204ENST00000371015 CTIFO43310 598 aaKnown RBP19.59■□□□□ 0.73
PHACTR3-204ENST00000371015 PTMAP06454 111 aaKnown RBP19.59■□□□□ 0.73
PHACTR3-204ENST00000371015 U2AF2P26368 475 aaKnown RBP eCLIP19.59■□□□□ 0.73
PHACTR3-204ENST00000371015 TERF2Q15554 542 aa19.59■□□□□ 0.73
PHACTR3-204ENST00000371015 TRIM34Q9BYJ4 488 aa19.59■□□□□ 0.73
PHACTR3-204ENST00000371015 ZNF777Q9ULD5 760 aaPredicted RBP19.59■□□□□ 0.73
PHACTR3-204ENST00000371015 SLFN5Q08AF3 891 aa19.58■□□□□ 0.73
PHACTR3-204ENST00000371015 SAMD1Q6SPF0 538 aaPredicted RBP19.58■□□□□ 0.73
PHACTR3-204ENST00000371015 HOMEZQ8IX15 550 aa19.58■□□□□ 0.73
PHACTR3-204ENST00000371015 NKTRP30414 1462 aaKnown RBP19.58■□□□□ 0.72
PHACTR3-204ENST00000371015 KDM5DQ9BY66 1539 aa19.57■□□□□ 0.72
PHACTR3-204ENST00000371015 BAG4O95429 457 aaKnown RBP19.57■□□□□ 0.72
PHACTR3-204ENST00000371015 CAPN2P17655 700 aa19.57■□□□□ 0.72
PHACTR3-204ENST00000371015 NUP155O75694 1391 aa19.56■□□□□ 0.72
PHACTR3-204ENST00000371015 HSP90B1P14625 803 aaKnown RBP19.56■□□□□ 0.72
PHACTR3-204ENST00000371015 LRSAM1Q6UWE0 723 aa19.56■□□□□ 0.72
PHACTR3-204ENST00000371015 MORC2Q9Y6X9 1032 aaPredicted RBP19.56■□□□□ 0.72
PHACTR3-204ENST00000371015 PLEKHD1A6NEE1 506 aa19.56■□□□□ 0.72
PHACTR3-204ENST00000371015 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.55■□□□□ 0.72
PHACTR3-204ENST00000371015 MAGI2Q86UL8 1455 aa19.55■□□□□ 0.72
PHACTR3-204ENST00000371015 AMER1Q5JTC6 1135 aaPredicted RBP19.55■□□□□ 0.72
PHACTR3-204ENST00000371015 NGEFQ8N5V2 710 aa19.55■□□□□ 0.72
PHACTR3-204ENST00000371015 IGSF3O75054 1194 aa19.54■□□□□ 0.72
PHACTR3-204ENST00000371015 PRIM1P49642 420 aaKnown RBP19.54■□□□□ 0.72
PHACTR3-204ENST00000371015 RWDD1Q9H446 243 aaPredicted RBP19.54■□□□□ 0.72
PHACTR3-204ENST00000371015 DDX41Q9UJV9 622 aaKnown RBP19.54■□□□□ 0.72
PHACTR3-204ENST00000371015 SOX12O15370 315 aa19.53■□□□□ 0.72
PHACTR3-204ENST00000371015 PDZRN3Q9UPQ7 1066 aa19.53■□□□□ 0.72
PHACTR3-204ENST00000371015 CAVIN1Q6NZI2 390 aaKnown RBP19.53■□□□□ 0.72
PHACTR3-204ENST00000371015 NUCB2P80303 420 aa19.53■□□□□ 0.72
PHACTR3-204ENST00000371015 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.52■□□□□ 0.72
PHACTR3-204ENST00000371015 C9orf84Q5VXU9 1444 aa19.52■□□□□ 0.72
PHACTR3-204ENST00000371015 ST20-MTHFSA0A0A6YYL1 179 aa19.52■□□□□ 0.72
PHACTR3-204ENST00000371015 AEBP1Q8IUX7 1158 aa19.52■□□□□ 0.71
PHACTR3-204ENST00000371015 TSC1Q92574 1164 aa19.52■□□□□ 0.71
PHACTR3-204ENST00000371015 CTNNA3Q9UI47 895 aa19.52■□□□□ 0.71
PHACTR3-204ENST00000371015 PLEKHH1Q9ULM0 1364 aa19.51■□□□□ 0.71
PHACTR3-204ENST00000371015 TNNT3P45378 269 aaPredicted RBP19.51■□□□□ 0.71
PHACTR3-204ENST00000371015 FEZ2Q9UHY8 353 aaPredicted RBP19.5■□□□□ 0.71
PHACTR3-204ENST00000371015 PREX2Q70Z35 1606 aa19.5■□□□□ 0.71
PHACTR3-204ENST00000371015 CC2D1BQ5T0F9 858 aaKnown RBP19.5■□□□□ 0.71
PHACTR3-204ENST00000371015 KRT222Q8N1A0 295 aa19.49■□□□□ 0.71
PHACTR3-204ENST00000371015 K7ELQ4 463 aaPredicted RBP19.49■□□□□ 0.71
PHACTR3-204ENST00000371015 PER1O15534 1290 aaPredicted RBP19.49■□□□□ 0.71
PHACTR3-204ENST00000371015 CDC42BPAQ5VT25 1732 aa19.49■□□□□ 0.71
PHACTR3-204ENST00000371015 TSPY4P0CV99 314 aa19.48■□□□□ 0.71
PHACTR3-204ENST00000371015 TSPY10P0CW01 314 aa19.48■□□□□ 0.71
PHACTR3-204ENST00000371015 UVSSAQ2YD98 709 aa19.48■□□□□ 0.71
PHACTR3-204ENST00000371015 CERS3Q8IU89 383 aa19.48■□□□□ 0.71
PHACTR3-204ENST00000371015 LMBRD1Q9NUN5 540 aa19.48■□□□□ 0.71
PHACTR3-204ENST00000371015 RICTORQ6R327 1708 aa19.48■□□□□ 0.71
PHACTR3-204ENST00000371015 PLCH2O75038 1416 aa19.48■□□□□ 0.71
PHACTR3-204ENST00000371015 CNKSR2Q8WXI2 1034 aa19.47■□□□□ 0.71
PHACTR3-204ENST00000371015 TPM3P06753 285 aa19.46■□□□□ 0.71
PHACTR3-204ENST00000371015 FAM184AQ8NB25 1140 aa19.46■□□□□ 0.71
PHACTR3-204ENST00000371015 SLC52A1Q9NWF4 448 aa19.46■□□□□ 0.71
PHACTR3-204ENST00000371015 REREQ9P2R6 1566 aa19.46■□□□□ 0.71
PHACTR3-204ENST00000371015 SSFA2P28290 1259 aa19.46■□□□□ 0.71
PHACTR3-204ENST00000371015 JARID2Q92833 1246 aaPredicted RBP19.46■□□□□ 0.71
PHACTR3-204ENST00000371015 BRMS1Q9HCU9 246 aa19.46■□□□□ 0.71
PHACTR3-204ENST00000371015 KDM2AQ9Y2K7 1162 aa19.46■□□□□ 0.71
PHACTR3-204ENST00000371015 PLXNC1O60486 1568 aa19.46■□□□□ 0.71
PHACTR3-204ENST00000371015 MAPK8IP2Q13387 824 aaPredicted RBP19.45■□□□□ 0.7
PHACTR3-204ENST00000371015 CEP120Q8N960 986 aa19.45■□□□□ 0.7
PHACTR3-204ENST00000371015 MYCBPQ99417 103 aaPredicted RBP19.45■□□□□ 0.7
PHACTR3-204ENST00000371015 TTC37Q6PGP7 1564 aa19.45■□□□□ 0.7
PHACTR3-204ENST00000371015 CNPY4Q8N129 248 aa19.45■□□□□ 0.7
PHACTR3-204ENST00000371015 MBD3O95983 291 aa19.44■□□□□ 0.7
PHACTR3-204ENST00000371015 ADAMTS8Q9UP79 889 aa19.44■□□□□ 0.7
PHACTR3-204ENST00000371015 RIOK3O14730 519 aaKnown RBP19.43■□□□□ 0.7
PHACTR3-204ENST00000371015 WDR43Q15061 677 aaKnown RBP eCLIP19.43■□□□□ 0.7
PHACTR3-204ENST00000371015 ARHGEF5Q12774 1597 aa19.42■□□□□ 0.7
PHACTR3-204ENST00000371015 RAD50Q92878 1312 aa19.42■□□□□ 0.7
PHACTR3-204ENST00000371015 ARHGEF40Q8TER5 1519 aa19.42■□□□□ 0.7
PHACTR3-204ENST00000371015 BCAR3O75815 825 aa19.42■□□□□ 0.7
PHACTR3-204ENST00000371015 MCTP1Q6DN14 999 aa19.42■□□□□ 0.7
PHACTR3-204ENST00000371015 NCAPGQ9BPX3 1015 aa19.42■□□□□ 0.7
PHACTR3-204ENST00000371015 KIF16BQ96L93 1317 aa19.41■□□□□ 0.7
PHACTR3-204ENST00000371015 YEATS2Q9ULM3 1422 aa19.4■□□□□ 0.7
PHACTR3-204ENST00000371015 KCNG1Q9UIX4 513 aa19.4■□□□□ 0.7
PHACTR3-204ENST00000371015 GTF2A1P52655 376 aaPredicted RBP19.4■□□□□ 0.7
PHACTR3-204ENST00000371015 CDCA8Q53HL2 280 aa19.4■□□□□ 0.7
PHACTR3-204ENST00000371015 WWC1Q8IX03 1113 aa19.4■□□□□ 0.7
PHACTR3-204ENST00000371015 KIF18AQ8NI77 898 aa19.4■□□□□ 0.7
PHACTR3-204ENST00000371015 COG6Q9Y2V7 657 aa19.4■□□□□ 0.7
PHACTR3-204ENST00000371015 FANCAO15360 1455 aa19.4■□□□□ 0.7
PHACTR3-204ENST00000371015 LMOD3Q0VAK6 560 aa19.39■□□□□ 0.7
PHACTR3-204ENST00000371015 RASSF4Q9H2L5 321 aa19.39■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms