RNA–Protein interactions for RNA: ENST00000370263.8

CHRNA4-201, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA4, Length 5,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-201ENST00000370263 CCDC191Q8NCU4 936 aa21.53■■□□□ 1.04
CHRNA4-201ENST00000370263 CASKIN1Q8WXD9 1431 aa21.53■■□□□ 1.04
CHRNA4-201ENST00000370263 ZNF396Q96N95 335 aaPredicted RBP21.53■■□□□ 1.04
CHRNA4-201ENST00000370263 KRT85P78386 507 aa21.52■■□□□ 1.04
CHRNA4-201ENST00000370263 CLASRPQ8N2M8 674 aaKnown RBP21.52■■□□□ 1.04
CHRNA4-201ENST00000370263 TTLL5Q6EMB2 1281 aa21.52■■□□□ 1.04
CHRNA4-201ENST00000370263 SYCE3A1L190 88 aa21.51■■□□□ 1.03
CHRNA4-201ENST00000370263 AXDND1Q5T1B0 1012 aaPredicted RBP21.51■■□□□ 1.03
CHRNA4-201ENST00000370263 EID1Q9Y6B2 187 aa21.51■■□□□ 1.03
CHRNA4-201ENST00000370263 ARAP1Q96P48 1450 aa21.51■■□□□ 1.03
CHRNA4-201ENST00000370263 ATAD2BQ9ULI0 1458 aa21.51■■□□□ 1.03
CHRNA4-201ENST00000370263 SMARCE1Q969G3 411 aa21.51■■□□□ 1.03
CHRNA4-201ENST00000370263 TSR2Q969E8 191 aaKnown RBP21.51■■□□□ 1.03
CHRNA4-201ENST00000370263 SURF6O75683 361 aaKnown RBP21.5■■□□□ 1.03
CHRNA4-201ENST00000370263 FSD1Q9BTV5 496 aa21.5■■□□□ 1.03
CHRNA4-201ENST00000370263 SCAPERQ9BY12 1400 aa21.5■■□□□ 1.03
CHRNA4-201ENST00000370263 ERICH2A1L162 156 aa21.5■■□□□ 1.03
CHRNA4-201ENST00000370263 TSPYL1Q9H0U9 437 aa21.5■■□□□ 1.03
CHRNA4-201ENST00000370263 PRDM10Q9NQV6 1147 aa21.5■■□□□ 1.03
CHRNA4-201ENST00000370263 HIP1O00291 1037 aa21.49■■□□□ 1.03
CHRNA4-201ENST00000370263 TWISTNBQ3B726 338 aaPredicted RBP21.49■■□□□ 1.03
CHRNA4-201ENST00000370263 FILIP1LQ4L180 1135 aa21.49■■□□□ 1.03
CHRNA4-201ENST00000370263 EIF3JO75822 258 aaKnown RBP21.49■■□□□ 1.03
CHRNA4-201ENST00000370263 ERLIN1O75477 346 aa21.49■■□□□ 1.03
CHRNA4-201ENST00000370263 CBX1P83916 185 aa21.49■■□□□ 1.03
CHRNA4-201ENST00000370263 CYP46A1Q9Y6A2 500 aa21.48■■□□□ 1.03
CHRNA4-201ENST00000370263 SLFN5Q08AF3 891 aa21.48■■□□□ 1.03
CHRNA4-201ENST00000370263 ZMYND15Q9H091 742 aa21.48■■□□□ 1.03
CHRNA4-201ENST00000370263 ERICH4A6NGS2 130 aa21.47■■□□□ 1.03
CHRNA4-201ENST00000370263 XPCQ01831 940 aaPredicted RBP21.47■■□□□ 1.03
CHRNA4-201ENST00000370263 STK38Q15208 465 aa21.47■■□□□ 1.03
CHRNA4-201ENST00000370263 SERPINC1P01008 464 aa21.47■■□□□ 1.03
CHRNA4-201ENST00000370263 TTC5Q8N0Z6 440 aa21.47■■□□□ 1.03
CHRNA4-201ENST00000370263 HFM1A2PYH4 1435 aa21.46■■□□□ 1.03
CHRNA4-201ENST00000370263 TBC1D2Q9BYX2 928 aa21.46■■□□□ 1.03
CHRNA4-201ENST00000370263 GNAI2P04899 355 aa21.46■■□□□ 1.03
CHRNA4-201ENST00000370263 NUP62CLQ9H1M0 184 aa21.46■■□□□ 1.03
CHRNA4-201ENST00000370263 CEBPZQ03701 1054 aaKnown RBP21.45■■□□□ 1.03
CHRNA4-201ENST00000370263 ANKRD1Q15327 319 aa21.45■■□□□ 1.02
CHRNA4-201ENST00000370263 NBPF1Q3BBV0 1214 aa21.45■■□□□ 1.02
CHRNA4-201ENST00000370263 SKAP1Q86WV1 359 aa21.44■■□□□ 1.02
CHRNA4-201ENST00000370263 LARP1BQ659C4 914 aaKnown RBP21.44■■□□□ 1.02
CHRNA4-201ENST00000370263 KIAA0754O94854 1291 aa21.44■■□□□ 1.02
CHRNA4-201ENST00000370263 PRKAR2BP31323 418 aa21.44■■□□□ 1.02
CHRNA4-201ENST00000370263 ERICH3Q5RHP9 1530 aa21.44■■□□□ 1.02
CHRNA4-201ENST00000370263 USP8P40818 1118 aa21.43■■□□□ 1.02
CHRNA4-201ENST00000370263 GTF2E1P29083 439 aaPredicted RBP21.42■■□□□ 1.02
CHRNA4-201ENST00000370263 MCM5P33992 734 aa21.42■■□□□ 1.02
CHRNA4-201ENST00000370263 WASHC4Q2M389 1173 aa21.42■■□□□ 1.02
CHRNA4-201ENST00000370263 DHX16O60231 1041 aaKnown RBP21.42■■□□□ 1.02
CHRNA4-201ENST00000370263 CCDC30Q5VVM6 783 aa21.42■■□□□ 1.02
CHRNA4-201ENST00000370263 NEUROD6Q96NK8 337 aa21.42■■□□□ 1.02
CHRNA4-201ENST00000370263 LRRCC1Q9C099 1032 aa21.42■■□□□ 1.02
CHRNA4-201ENST00000370263 UBXN4Q92575 508 aa21.42■■□□□ 1.02
CHRNA4-201ENST00000370263 CABP2Q9NPB3 220 aa21.42■■□□□ 1.02
CHRNA4-201ENST00000370263 KIAA1107Q9UPP5 1409 aa21.42■■□□□ 1.02
CHRNA4-201ENST00000370263 KIF2AO00139 706 aaPredicted RBP21.42■■□□□ 1.02
CHRNA4-201ENST00000370263 CLCN1P35523 988 aa21.42■■□□□ 1.02
CHRNA4-201ENST00000370263 TNPO1Q92973 898 aaKnown RBP21.42■■□□□ 1.02
CHRNA4-201ENST00000370263 TMX4Q9H1E5 349 aaPredicted RBP21.42■■□□□ 1.02
CHRNA4-201ENST00000370263 SKIDA1Q1XH10 827 aa21.41■■□□□ 1.02
CHRNA4-201ENST00000370263 C20orf194Q5TEA3 1177 aa21.41■■□□□ 1.02
CHRNA4-201ENST00000370263 BRMS1Q9HCU9 246 aa21.41■■□□□ 1.02
CHRNA4-201ENST00000370263 CBFA2T2O43439 604 aa21.41■■□□□ 1.02
CHRNA4-201ENST00000370263 XBP1P17861 261 aa21.41■■□□□ 1.02
CHRNA4-201ENST00000370263 FILIP1Q7Z7B0 1213 aa21.41■■□□□ 1.02
CHRNA4-201ENST00000370263 JMYQ8N9B5 988 aa21.41■■□□□ 1.02
CHRNA4-201ENST00000370263 SPATA32Q96LK8 384 aa21.41■■□□□ 1.02
CHRNA4-201ENST00000370263 DEF6Q9H4E7 631 aa21.41■■□□□ 1.02
CHRNA4-201ENST00000370263 CEP57L1Q8IYX8 460 aa21.41■■□□□ 1.02
CHRNA4-201ENST00000370263 OFD1O75665 1012 aa21.41■■□□□ 1.02
CHRNA4-201ENST00000370263 AMOTL1Q8IY63 956 aa21.41■■□□□ 1.02
CHRNA4-201ENST00000370263 PIP4K2AP48426 406 aaPredicted RBP21.4■■□□□ 1.02
CHRNA4-201ENST00000370263 ME1P48163 572 aa21.4■■□□□ 1.02
CHRNA4-201ENST00000370263 ZSCAN31Q96LW9 406 aaPredicted RBP21.4■■□□□ 1.02
CHRNA4-201ENST00000370263 PDIA4P13667 645 aaKnown RBP21.4■■□□□ 1.02
CHRNA4-201ENST00000370263 MYO6Q9UM54 1294 aa21.4■■□□□ 1.02
CHRNA4-201ENST00000370263 MAP3K11Q16584 847 aa21.39■■□□□ 1.02
CHRNA4-201ENST00000370263 TMCO3Q6UWJ1 677 aa21.39■■□□□ 1.01
CHRNA4-201ENST00000370263 PPFIBP1Q86W92 1011 aa21.39■■□□□ 1.01
CHRNA4-201ENST00000370263 SRCIN1Q9C0H9 1055 aa21.39■■□□□ 1.01
CHRNA4-201ENST00000370263 DYNC1I1O14576 645 aa21.39■■□□□ 1.01
CHRNA4-201ENST00000370263 HSP90AB3PQ58FF7 597 aa21.39■■□□□ 1.01
CHRNA4-201ENST00000370263 ERC1Q8IUD2 1116 aa21.38■■□□□ 1.01
CHRNA4-201ENST00000370263 FAM177A1Q8N128 213 aaPredicted RBP21.38■■□□□ 1.01
CHRNA4-201ENST00000370263 BRPF1P55201 1214 aaPredicted RBP21.38■■□□□ 1.01
CHRNA4-201ENST00000370263 CCT4P50991 539 aaKnown RBP21.38■■□□□ 1.01
CHRNA4-201ENST00000370263 CALCOCO1Q9P1Z2 691 aa21.38■■□□□ 1.01
CHRNA4-201ENST00000370263 CGNQ9P2M7 1197 aaKnown RBP21.38■■□□□ 1.01
CHRNA4-201ENST00000370263 RIC3Q7Z5B4 369 aa21.37■■□□□ 1.01
CHRNA4-201ENST00000370263 PTPN14Q15678 1187 aa21.37■■□□□ 1.01
CHRNA4-201ENST00000370263 DACH1Q9UI36 760 aa21.37■■□□□ 1.01
CHRNA4-201ENST00000370263 WWC1Q8IX03 1113 aa21.37■■□□□ 1.01
CHRNA4-201ENST00000370263 CFAP45Q9UL16 551 aa21.37■■□□□ 1.01
CHRNA4-201ENST00000370263 C11orf95C9JLR9 678 aaPredicted RBP21.37■■□□□ 1.01
CHRNA4-201ENST00000370263 CCDC183Q5T5S1 534 aa21.37■■□□□ 1.01
CHRNA4-201ENST00000370263 ERBINQ96RT1 1412 aa21.36■■□□□ 1.01
CHRNA4-201ENST00000370263 SSFA2P28290 1259 aa21.36■■□□□ 1.01
CHRNA4-201ENST00000370263 PPP6R1Q9UPN7 881 aa21.36■■□□□ 1.01
CHRNA4-201ENST00000370263 CFTRP13569 1480 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms