RNA–Protein interactions for RNA: ENST00000368632.6

HDAC2-201, Transcript of histone deacetylase 2, humanhuman

TSL 2 BASIC

Gene HDAC2, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-201ENST00000368632 DZIP1LQ8IYY4 767 aaKnown RBP25.72■■□□□ 1.71
HDAC2-201ENST00000368632 SENP3Q9H4L4 574 aaPredicted RBP25.72■■□□□ 1.71
HDAC2-201ENST00000368632 MINK1Q8N4C8 1332 aaPredicted RBP25.71■■□□□ 1.71
HDAC2-201ENST00000368632 YTHDC2Q9H6S0 1430 aaKnown RBP25.71■■□□□ 1.71
HDAC2-201ENST00000368632 CD163L1Q9NR16 1453 aa25.71■■□□□ 1.71
HDAC2-201ENST00000368632 PRAM1Q96QH2 718 aa25.71■■□□□ 1.71
HDAC2-201ENST00000368632 BECN1Q14457 450 aa25.7■■□□□ 1.71
HDAC2-201ENST00000368632 FYB1O15117 783 aa25.7■■□□□ 1.7
HDAC2-201ENST00000368632 EXOSC9Q06265 439 aaKnown RBP25.7■■□□□ 1.7
HDAC2-201ENST00000368632 SMC4Q9NTJ3 1288 aa25.7■■□□□ 1.7
HDAC2-201ENST00000368632 POGKQ9P215 609 aa25.7■■□□□ 1.7
HDAC2-201ENST00000368632 TRIM35Q9UPQ4 493 aa25.7■■□□□ 1.7
HDAC2-201ENST00000368632 UPF2Q9HAU5 1272 aaKnown RBP25.68■■□□□ 1.7
HDAC2-201ENST00000368632 FRAT2O75474 233 aaPredicted RBP25.68■■□□□ 1.7
HDAC2-201ENST00000368632 IL16Q14005 1332 aa25.67■■□□□ 1.7
HDAC2-201ENST00000368632 KIF20BQ96Q89 1820 aa25.67■■□□□ 1.7
HDAC2-201ENST00000368632 HDGFL2Q7Z4V5 671 aaPredicted RBP25.65■■□□□ 1.7
HDAC2-201ENST00000368632 ALKQ9UM73 1620 aa25.65■■□□□ 1.7
HDAC2-201ENST00000368632 IL27Q8NEV9 243 aa25.64■■□□□ 1.7
HDAC2-201ENST00000368632 DIAPH1O60610 1272 aaKnown RBP25.64■■□□□ 1.69
HDAC2-201ENST00000368632 TRIM27P14373 513 aa25.64■■□□□ 1.69
HDAC2-201ENST00000368632 SSH1Q8WYL5 1049 aa25.64■■□□□ 1.69
HDAC2-201ENST00000368632 PNNQ9H307 717 aaKnown RBP25.63■■□□□ 1.69
HDAC2-201ENST00000368632 TBC1D32Q96NH3 1257 aa25.62■■□□□ 1.69
HDAC2-201ENST00000368632 DDX19BQ9UMR2 479 aa25.62■■□□□ 1.69
HDAC2-201ENST00000368632 PNPLA6Q8IY17 1366 aa25.62■■□□□ 1.69
HDAC2-201ENST00000368632 RIPK4P57078 832 aa25.62■■□□□ 1.69
HDAC2-201ENST00000368632 ATF7IPQ6VMQ6 1270 aa25.61■■□□□ 1.69
HDAC2-201ENST00000368632 ARHGEF40Q8TER5 1519 aa25.61■■□□□ 1.69
HDAC2-201ENST00000368632 CDK19Q9BWU1 502 aa25.6■■□□□ 1.69
HDAC2-201ENST00000368632 ITPRIPQ8IWB1 547 aa25.6■■□□□ 1.69
HDAC2-201ENST00000368632 CDC42BPGQ6DT37 1551 aa25.6■■□□□ 1.69
HDAC2-201ENST00000368632 HDAC1Q13547 482 aaPredicted RBP25.59■■□□□ 1.69
HDAC2-201ENST00000368632 NOB1Q9ULX3 412 aaKnown RBP25.58■■□□□ 1.69
HDAC2-201ENST00000368632 FBXO31Q5XUX0 539 aaPredicted RBP25.57■■□□□ 1.68
HDAC2-201ENST00000368632 LRRC7Q96NW7 1537 aa25.57■■□□□ 1.68
HDAC2-201ENST00000368632 CABP1Q9NZU7 370 aa25.57■■□□□ 1.68
HDAC2-201ENST00000368632 KIF16BQ96L93 1317 aa25.55■■□□□ 1.68
HDAC2-201ENST00000368632 STAG3Q9UJ98 1225 aa25.54■■□□□ 1.68
HDAC2-201ENST00000368632 SLKQ9H2G2 1235 aaPredicted RBP25.54■■□□□ 1.68
HDAC2-201ENST00000368632 IPO8O15397 1037 aaKnown RBP25.53■■□□□ 1.68
HDAC2-201ENST00000368632 FCHSD2O94868 740 aa25.53■■□□□ 1.68
HDAC2-201ENST00000368632 TMEM57Q8N5G2 664 aa25.53■■□□□ 1.68
HDAC2-201ENST00000368632 DLC1Q96QB1 1528 aa25.53■■□□□ 1.68
HDAC2-201ENST00000368632 ATP7BP35670 1465 aa25.52■■□□□ 1.68
HDAC2-201ENST00000368632 FAM135BQ49AJ0 1406 aa25.52■■□□□ 1.68
HDAC2-201ENST00000368632 ALDH1L2Q3SY69 923 aa25.51■■□□□ 1.67
HDAC2-201ENST00000368632 TBC1D2Q9BYX2 928 aa25.51■■□□□ 1.67
HDAC2-201ENST00000368632 SMC5Q8IY18 1101 aa25.5■■□□□ 1.67
HDAC2-201ENST00000368632 ANTXR1Q9H6X2 564 aa25.5■■□□□ 1.67
HDAC2-201ENST00000368632 RSPH6AQ9H0K4 717 aa25.49■■□□□ 1.67
HDAC2-201ENST00000368632 ZBTB40Q9NUA8 1239 aa25.49■■□□□ 1.67
HDAC2-201ENST00000368632 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.49■■□□□ 1.67
HDAC2-201ENST00000368632 BRPF3Q9ULD4 1205 aa25.49■■□□□ 1.67
HDAC2-201ENST00000368632 PRKAR2BP31323 418 aa25.48■■□□□ 1.67
HDAC2-201ENST00000368632 POLKQ9UBT6 870 aa25.47■■□□□ 1.67
HDAC2-201ENST00000368632 SETD1AO15047 1707 aaKnown RBP25.47■■□□□ 1.67
HDAC2-201ENST00000368632 RTN4Q9NQC3 1192 aaKnown RBP25.46■■□□□ 1.67
HDAC2-201ENST00000368632 RIMBP3CA6NJZ7 1639 aa25.46■■□□□ 1.67
HDAC2-201ENST00000368632 RIMBP3BA6NNM3 1639 aa25.46■■□□□ 1.67
HDAC2-201ENST00000368632 RIMBP3Q9UFD9 1639 aa25.46■■□□□ 1.67
HDAC2-201ENST00000368632 C22orf23Q9BZE7 217 aa25.46■■□□□ 1.67
HDAC2-201ENST00000368632 PPIP5K1Q6PFW1 1433 aa25.45■■□□□ 1.67
HDAC2-201ENST00000368632 A2ML1A8K2U0 1454 aa25.45■■□□□ 1.67
HDAC2-201ENST00000368632 ZNF428Q96B54 188 aa25.45■■□□□ 1.66
HDAC2-201ENST00000368632 MFAP1P55081 439 aaKnown RBP25.44■■□□□ 1.66
HDAC2-201ENST00000368632 WAPLQ7Z5K2 1190 aa25.44■■□□□ 1.66
HDAC2-201ENST00000368632 MAP2P11137 1827 aaKnown RBP25.44■■□□□ 1.66
HDAC2-201ENST00000368632 REREQ9P2R6 1566 aa25.43■■□□□ 1.66
HDAC2-201ENST00000368632 RIMS2Q9UQ26 1411 aa25.43■■□□□ 1.66
HDAC2-201ENST00000368632 BRPF1P55201 1214 aaPredicted RBP25.43■■□□□ 1.66
HDAC2-201ENST00000368632 NFE2L2Q16236 605 aa25.43■■□□□ 1.66
HDAC2-201ENST00000368632 FBLN1P23142 703 aa25.42■■□□□ 1.66
HDAC2-201ENST00000368632 SPATA31D1Q6ZQQ2 1576 aa25.41■■□□□ 1.66
HDAC2-201ENST00000368632 AGLP35573 1532 aa25.41■■□□□ 1.66
HDAC2-201ENST00000368632 CALD1Q05682 793 aaKnown RBP25.41■■□□□ 1.66
HDAC2-201ENST00000368632 NUCB1Q02818 461 aa25.4■■□□□ 1.66
HDAC2-201ENST00000368632 PPP6R1Q9UPN7 881 aa25.4■■□□□ 1.66
HDAC2-201ENST00000368632 EDC4Q6P2E9 1401 aaKnown RBP25.39■■□□□ 1.66
HDAC2-201ENST00000368632 HMOX1P09601 288 aa25.39■■□□□ 1.65
HDAC2-201ENST00000368632 PHACTR3Q96KR7 559 aa25.38■■□□□ 1.65
HDAC2-201ENST00000368632 CDK12Q9NYV4 1490 aaPredicted RBP25.38■■□□□ 1.65
HDAC2-201ENST00000368632 CPSF1Q10570 1443 aaKnown RBP25.37■■□□□ 1.65
HDAC2-201ENST00000368632 EMILIN1Q9Y6C2 1016 aa25.36■■□□□ 1.65
HDAC2-201ENST00000368632 CHMP4BQ9H444 224 aaKnown RBP25.36■■□□□ 1.65
HDAC2-201ENST00000368632 PTCH1Q13635 1447 aa25.36■■□□□ 1.65
HDAC2-201ENST00000368632 VAMP4O75379 141 aa25.35■■□□□ 1.65
HDAC2-201ENST00000368632 GNAI1P63096 354 aa25.35■■□□□ 1.65
HDAC2-201ENST00000368632 MRPL50Q8N5N7 158 aaKnown RBP25.35■■□□□ 1.65
HDAC2-201ENST00000368632 IFT57Q9NWB7 429 aa25.35■■□□□ 1.65
HDAC2-201ENST00000368632 IL13P35225 146 aa25.35■■□□□ 1.65
HDAC2-201ENST00000368632 CHD1LQ86WJ1 897 aa25.35■■□□□ 1.65
HDAC2-201ENST00000368632 ARHGAP45Q92619 1136 aa25.35■■□□□ 1.65
HDAC2-201ENST00000368632 THUMPD2Q9BTF0 503 aaKnown RBP25.35■■□□□ 1.65
HDAC2-201ENST00000368632 LNPKQ9C0E8 428 aa25.35■■□□□ 1.65
HDAC2-201ENST00000368632 WASLO00401 505 aaPredicted RBP25.34■■□□□ 1.65
HDAC2-201ENST00000368632 PIK3R4Q99570 1358 aa25.34■■□□□ 1.65
HDAC2-201ENST00000368632 NRXN3Q9Y4C0 1643 aa25.34■■□□□ 1.65
HDAC2-201ENST00000368632 NME9Q86XW9 330 aa25.33■■□□□ 1.65
HDAC2-201ENST00000368632 SPRYD3Q8NCJ5 442 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms