RNA–Protein interactions for RNA: ENST00000368301.6

LMNA-207, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-207ENST00000368301 BACH2Q9BYV9 841 aa23.51■■□□□ 1.35
LMNA-207ENST00000368301 PNPLA6Q8IY17 1366 aa23.5■■□□□ 1.35
LMNA-207ENST00000368301 ZRANB1Q9UGI0 708 aa23.5■■□□□ 1.35
LMNA-207ENST00000368301 TNNQ9UQP3 1299 aa23.5■■□□□ 1.35
LMNA-207ENST00000368301 DIAPH1O60610 1272 aaKnown RBP23.5■■□□□ 1.35
LMNA-207ENST00000368301 TMPOP42166 694 aaKnown RBP23.5■■□□□ 1.35
LMNA-207ENST00000368301 PPM1GO15355 546 aaPredicted RBP23.49■■□□□ 1.35
LMNA-207ENST00000368301 CANXP27824 592 aaKnown RBP23.49■■□□□ 1.35
LMNA-207ENST00000368301 ERICH6Q7L0X2 663 aa23.49■■□□□ 1.35
LMNA-207ENST00000368301 TSR2Q969E8 191 aaKnown RBP23.49■■□□□ 1.35
LMNA-207ENST00000368301 TRIM35Q9UPQ4 493 aa23.49■■□□□ 1.35
LMNA-207ENST00000368301 COG6Q9Y2V7 657 aa23.49■■□□□ 1.35
LMNA-207ENST00000368301 CPSF1Q10570 1443 aaKnown RBP23.48■■□□□ 1.35
LMNA-207ENST00000368301 NUDT16Q96DE0 195 aaKnown RBP23.48■■□□□ 1.35
LMNA-207ENST00000368301 POLKQ9UBT6 870 aa23.48■■□□□ 1.35
LMNA-207ENST00000368301 NME9Q86XW9 330 aa23.48■■□□□ 1.35
LMNA-207ENST00000368301 PAK3O75914 559 aaPredicted RBP23.47■■□□□ 1.35
LMNA-207ENST00000368301 ANP32AP39687 249 aaKnown RBP23.47■■□□□ 1.35
LMNA-207ENST00000368301 PDE3AQ14432 1141 aa23.47■■□□□ 1.35
LMNA-207ENST00000368301 KNDC1Q76NI1 1749 aa23.47■■□□□ 1.35
LMNA-207ENST00000368301 TECPR2O15040 1411 aa23.47■■□□□ 1.35
LMNA-207ENST00000368301 LTKP29376 864 aa23.47■■□□□ 1.35
LMNA-207ENST00000368301 HDGFP51858 240 aaKnown RBP23.46■■□□□ 1.35
LMNA-207ENST00000368301 NPM2Q86SE8 214 aaKnown RBP23.46■■□□□ 1.35
LMNA-207ENST00000368301 ROBO2Q9HCK4 1378 aa23.46■■□□□ 1.35
LMNA-207ENST00000368301 MAPK8IP3Q9UPT6 1336 aa23.46■■□□□ 1.35
LMNA-207ENST00000368301 ADAMTS13Q76LX8 1427 aa23.46■■□□□ 1.35
LMNA-207ENST00000368301 NCBP3Q53F19 620 aaKnown RBP23.45■■□□□ 1.35
LMNA-207ENST00000368301 PLPPR3Q6T4P5 718 aa23.45■■□□□ 1.35
LMNA-207ENST00000368301 MYH16Q9H6N6 1097 aa23.45■■□□□ 1.35
LMNA-207ENST00000368301 FAM135BQ49AJ0 1406 aa23.45■■□□□ 1.34
LMNA-207ENST00000368301 CPS1P31327 1500 aa23.44■■□□□ 1.34
LMNA-207ENST00000368301 RLBP1P12271 317 aa23.44■■□□□ 1.34
LMNA-207ENST00000368301 PRR36Q9H6K5 1346 aa23.44■■□□□ 1.34
LMNA-207ENST00000368301 IGHDP01880 384 aa23.43■■□□□ 1.34
LMNA-207ENST00000368301 EMILIN1Q9Y6C2 1016 aa23.43■■□□□ 1.34
LMNA-207ENST00000368301 EDC4Q6P2E9 1401 aaKnown RBP23.43■■□□□ 1.34
LMNA-207ENST00000368301 NOP58Q9Y2X3 529 aaKnown RBP23.43■■□□□ 1.34
LMNA-207ENST00000368301 MAP2P11137 1827 aaKnown RBP23.43■■□□□ 1.34
LMNA-207ENST00000368301 IPO9Q96P70 1041 aaKnown RBP23.42■■□□□ 1.34
LMNA-207ENST00000368301 RIPK4P57078 832 aa23.41■■□□□ 1.34
LMNA-207ENST00000368301 SIRT1Q96EB6 747 aa23.41■■□□□ 1.34
LMNA-207ENST00000368301 CCDC61Q9Y6R9 512 aa23.41■■□□□ 1.34
LMNA-207ENST00000368301 LRRC7Q96NW7 1537 aa23.41■■□□□ 1.34
LMNA-207ENST00000368301 CDC42BPGQ6DT37 1551 aa23.41■■□□□ 1.34
LMNA-207ENST00000368301 EXOSC9Q06265 439 aaKnown RBP23.4■■□□□ 1.34
LMNA-207ENST00000368301 CLUAP1Q96AJ1 413 aa23.39■■□□□ 1.34
LMNA-207ENST00000368301 SLC26A8Q96RN1 970 aa23.39■■□□□ 1.33
LMNA-207ENST00000368301 RSPH6AQ9H0K4 717 aa23.39■■□□□ 1.33
LMNA-207ENST00000368301 NUTM2FA1L443 756 aa23.38■■□□□ 1.33
LMNA-207ENST00000368301 PRKAR2BP31323 418 aa23.38■■□□□ 1.33
LMNA-207ENST00000368301 HMOX1P09601 288 aa23.38■■□□□ 1.33
LMNA-207ENST00000368301 RGS3P49796 1198 aa23.38■■□□□ 1.33
LMNA-207ENST00000368301 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.38■■□□□ 1.33
LMNA-207ENST00000368301 MON2Q7Z3U7 1717 aa23.37■■□□□ 1.33
LMNA-207ENST00000368301 PLEKHG1Q9ULL1 1385 aa23.36■■□□□ 1.33
LMNA-207ENST00000368301 FCHSD2O94868 740 aa23.36■■□□□ 1.33
LMNA-207ENST00000368301 RRS1Q15050 365 aaKnown RBP23.36■■□□□ 1.33
LMNA-207ENST00000368301 PHACTR3Q96KR7 559 aa23.35■■□□□ 1.33
LMNA-207ENST00000368301 PTPRUQ92729 1446 aa23.35■■□□□ 1.33
LMNA-207ENST00000368301 AKAP12Q02952 1782 aa23.34■■□□□ 1.33
LMNA-207ENST00000368301 C3P01024 1663 aa23.34■■□□□ 1.33
LMNA-207ENST00000368301 IL13P35225 146 aa23.33■■□□□ 1.33
LMNA-207ENST00000368301 COG3Q96JB2 828 aa23.33■■□□□ 1.33
LMNA-207ENST00000368301 ITSN1Q15811 1721 aa23.33■■□□□ 1.32
LMNA-207ENST00000368301 PCDHB15Q9Y5E8 787 aa23.32■■□□□ 1.32
LMNA-207ENST00000368301 IL16Q14005 1332 aa23.31■■□□□ 1.32
LMNA-207ENST00000368301 SSH1Q8WYL5 1049 aa23.31■■□□□ 1.32
LMNA-207ENST00000368301 PNNQ9H307 717 aaKnown RBP23.31■■□□□ 1.32
LMNA-207ENST00000368301 SMC4Q9NTJ3 1288 aa23.31■■□□□ 1.32
LMNA-207ENST00000368301 ZBTB47Q9UFB7 747 aaPredicted RBP23.3■■□□□ 1.32
LMNA-207ENST00000368301 CDK12Q9NYV4 1490 aaPredicted RBP23.3■■□□□ 1.32
LMNA-207ENST00000368301 AATKQ6ZMQ8 1374 aa23.3■■□□□ 1.32
LMNA-207ENST00000368301 C8orf34Q49A92 452 aa23.3■■□□□ 1.32
LMNA-207ENST00000368301 THUMPD2Q9BTF0 503 aaKnown RBP23.3■■□□□ 1.32
LMNA-207ENST00000368301 ACEP12821 1306 aa23.28■■□□□ 1.32
LMNA-207ENST00000368301 ZKSCAN2Q63HK3 967 aa23.28■■□□□ 1.32
LMNA-207ENST00000368301 CT47B1P0C2W7 299 aaPredicted RBP23.27■■□□□ 1.32
LMNA-207ENST00000368301 ZNF692Q9BU19 519 aaPredicted RBP23.27■■□□□ 1.32
LMNA-207ENST00000368301 EID1Q9Y6B2 187 aa23.27■■□□□ 1.32
LMNA-207ENST00000368301 FAM161AQ3B820 660 aa23.26■■□□□ 1.31
LMNA-207ENST00000368301 FER1L4A9Z1Z3 1794 aa23.26■■□□□ 1.31
LMNA-207ENST00000368301 NFE2L2Q16236 605 aa23.26■■□□□ 1.31
LMNA-207ENST00000368301 AMOTL2Q9Y2J4 779 aa23.26■■□□□ 1.31
LMNA-207ENST00000368301 LAS1LQ9Y4W2 734 aaKnown RBP23.26■■□□□ 1.31
LMNA-207ENST00000368301 TTC21BQ7Z4L5 1316 aa23.26■■□□□ 1.31
LMNA-207ENST00000368301 MVPQ14764 893 aaKnown RBP23.25■■□□□ 1.31
LMNA-207ENST00000368301 TOPAZ1Q8N9V7 1692 aa23.25■■□□□ 1.31
LMNA-207ENST00000368301 TRIM27P14373 513 aa23.25■■□□□ 1.31
LMNA-207ENST00000368301 DZIP1LQ8IYY4 767 aaKnown RBP23.25■■□□□ 1.31
LMNA-207ENST00000368301 ARHGAP23Q9P227 1491 aa23.24■■□□□ 1.31
LMNA-207ENST00000368301 SLIT1O75093 1534 aa23.24■■□□□ 1.31
LMNA-207ENST00000368301 FTSJ3Q8IY81 847 aaKnown RBP23.24■■□□□ 1.31
LMNA-207ENST00000368301 NRKQ7Z2Y5 1582 aa23.24■■□□□ 1.31
LMNA-207ENST00000368301 NOB1Q9ULX3 412 aaKnown RBP23.23■■□□□ 1.31
LMNA-207ENST00000368301 NEFMP07197 916 aa23.23■■□□□ 1.31
LMNA-207ENST00000368301 PLEKHG3A1L390 1219 aa23.22■■□□□ 1.31
LMNA-207ENST00000368301 USP6P35125 1406 aa23.2■■□□□ 1.3
LMNA-207ENST00000368301 PMFBP1Q8TBY8 1022 aa23.2■■□□□ 1.3
LMNA-207ENST00000368301 TRHP20396 242 aaPredicted RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms