RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 AMOTL2Q9Y2J4 779 aa15.04■□□□□ -0
PTPRK-203ENST00000368207 KIF3AQ9Y496 699 aa15.04■□□□□ -0
PTPRK-203ENST00000368207 ASXL2Q76L83 1435 aa15.04■□□□□ -0
PTPRK-203ENST00000368207 DDX11L8A8MPP1 907 aa15.04■□□□□ -0
PTPRK-203ENST00000368207 H3BQV1 296 aa15.04■□□□□ -0
PTPRK-203ENST00000368207 IFFO2Q5TF58 517 aa15.04■□□□□ -0
PTPRK-203ENST00000368207 SF3A1Q15459 793 aaKnown RBP15.04■□□□□ -0
PTPRK-203ENST00000368207 MIS18AQ9NYP9 233 aa15.04■□□□□ -0
PTPRK-203ENST00000368207 FAM135AQ9P2D6 1515 aa15.03■□□□□ -0
PTPRK-203ENST00000368207 DDX54Q8TDD1 881 aaKnown RBP15.03■□□□□ -0
PTPRK-203ENST00000368207 KDM5BQ9UGL1 1544 aa15.03■□□□□ -0
PTPRK-203ENST00000368207 SCAF11Q99590 1463 aaKnown RBP15.03■□□□□ -0
PTPRK-203ENST00000368207 CDC45O75419 566 aa15.03■□□□□ -0
PTPRK-203ENST00000368207 MVPQ14764 893 aaKnown RBP15.03■□□□□ -0
PTPRK-203ENST00000368207 AEBP2Q6ZN18 517 aaPredicted RBP15.03■□□□□ -0
PTPRK-203ENST00000368207 TOM1L2Q6ZVM7 507 aa15.03■□□□□ -0
PTPRK-203ENST00000368207 SYCP2Q9BX26 1530 aa15.03■□□□□ -0
PTPRK-203ENST00000368207 AMER1Q5JTC6 1135 aaPredicted RBP15.03■□□□□ -0
PTPRK-203ENST00000368207 FAM177BA6PVY3 158 aa15.02■□□□□ -0
PTPRK-203ENST00000368207 WASLO00401 505 aaPredicted RBP15.02■□□□□ -0
PTPRK-203ENST00000368207 ERC2O15083 957 aa15.02■□□□□ -0
PTPRK-203ENST00000368207 CSPP1Q1MSJ5 1256 aa15.02■□□□□ -0
PTPRK-203ENST00000368207 MEX3CQ5U5Q3 659 aaKnown RBP15.02■□□□□ -0
PTPRK-203ENST00000368207 CLASRPQ8N2M8 674 aaKnown RBP15.02■□□□□ -0
PTPRK-203ENST00000368207 RBM42Q9BTD8 480 aaKnown RBP15.02■□□□□ -0
PTPRK-203ENST00000368207 PRDM11Q9NQV5 511 aa15.02■□□□□ -0
PTPRK-203ENST00000368207 ADAMTS12P58397 1594 aa15.02■□□□□ -0
PTPRK-203ENST00000368207 MCM10Q7L590 875 aa15.02□□□□□ -0.01
PTPRK-203ENST00000368207 CHAF1AQ13111 956 aaPredicted RBP15.02□□□□□ -0.01
PTPRK-203ENST00000368207 TRAPPC8Q9Y2L5 1435 aa15.02□□□□□ -0.01
PTPRK-203ENST00000368207 LRRFIP1Q32MZ4 808 aaKnown RBP15.01□□□□□ -0.01
PTPRK-203ENST00000368207 C20orf194Q5TEA3 1177 aa15.01□□□□□ -0.01
PTPRK-203ENST00000368207 GNAI2P04899 355 aa15.01□□□□□ -0.01
PTPRK-203ENST00000368207 CHMP5Q9NZZ3 219 aa15.01□□□□□ -0.01
PTPRK-203ENST00000368207 CTTNBP2Q8WZ74 1663 aa15.01□□□□□ -0.01
PTPRK-203ENST00000368207 CT47B1P0C2W7 299 aaPredicted RBP15.01□□□□□ -0.01
PTPRK-203ENST00000368207 MCTP1Q6DN14 999 aa15.01□□□□□ -0.01
PTPRK-203ENST00000368207 KIAA0556O60303 1618 aa15□□□□□ -0.01
PTPRK-203ENST00000368207 KIAA2012Q0VF49 1180 aa15□□□□□ -0.01
PTPRK-203ENST00000368207 FOXO3O43524 673 aa15□□□□□ -0.01
PTPRK-203ENST00000368207 VPS37DQ86XT2 251 aa15□□□□□ -0.01
PTPRK-203ENST00000368207 RASSF8Q8NHQ8 419 aa15□□□□□ -0.01
PTPRK-203ENST00000368207 FBLN1P23142 703 aa14.99□□□□□ -0.01
PTPRK-203ENST00000368207 EIF4G3O43432 1585 aaKnown RBP14.99□□□□□ -0.01
PTPRK-203ENST00000368207 RNF20Q5VTR2 975 aa14.98□□□□□ -0.01
PTPRK-203ENST00000368207 GCC1Q96CN9 775 aa14.98□□□□□ -0.01
PTPRK-203ENST00000368207 MYL6BP14649 208 aa14.98□□□□□ -0.01
PTPRK-203ENST00000368207 GSE1Q14687 1217 aa14.98□□□□□ -0.01
PTPRK-203ENST00000368207 SKAP1Q86WV1 359 aa14.98□□□□□ -0.01
PTPRK-203ENST00000368207 TMEM57Q8N5G2 664 aa14.98□□□□□ -0.01
PTPRK-203ENST00000368207 USHBP1Q8N6Y0 703 aa14.98□□□□□ -0.01
PTPRK-203ENST00000368207 CABP4P57796 275 aa14.98□□□□□ -0.01
PTPRK-203ENST00000368207 ATP6V1DQ9Y5K8 247 aa14.98□□□□□ -0.01
PTPRK-203ENST00000368207 SSH1Q8WYL5 1049 aa14.97□□□□□ -0.01
PTPRK-203ENST00000368207 SRCIN1Q9C0H9 1055 aa14.97□□□□□ -0.01
PTPRK-203ENST00000368207 CLSTN1O94985 981 aa14.97□□□□□ -0.01
PTPRK-203ENST00000368207 VPS37CA5D8V6 355 aaPredicted RBP14.96□□□□□ -0.01
PTPRK-203ENST00000368207 CCT4P50991 539 aaKnown RBP14.96□□□□□ -0.01
PTPRK-203ENST00000368207 WASHC4Q2M389 1173 aa14.96□□□□□ -0.01
PTPRK-203ENST00000368207 FSD1Q9BTV5 496 aa14.96□□□□□ -0.01
PTPRK-203ENST00000368207 NUTM2BA6NNL0 878 aaPredicted RBP14.96□□□□□ -0.01
PTPRK-203ENST00000368207 NUTM2EB1AL46 878 aaPredicted RBP14.96□□□□□ -0.01
PTPRK-203ENST00000368207 NUTM2AQ8IVF1 878 aaPredicted RBP14.96□□□□□ -0.01
PTPRK-203ENST00000368207 BACH2Q9BYV9 841 aa14.96□□□□□ -0.01
PTPRK-203ENST00000368207 PHF8Q9UPP1 1060 aa14.96□□□□□ -0.01
PTPRK-203ENST00000368207 RARSP54136 660 aaKnown RBP14.96□□□□□ -0.02
PTPRK-203ENST00000368207 CPLX2Q6PUV4 134 aaKnown RBP14.95□□□□□ -0.02
PTPRK-203ENST00000368207 CCDC34Q96HJ3 373 aa14.95□□□□□ -0.02
PTPRK-203ENST00000368207 BTBD11A6QL63 1104 aa14.95□□□□□ -0.02
PTPRK-203ENST00000368207 CPLX1O14810 134 aa14.95□□□□□ -0.02
PTPRK-203ENST00000368207 SYNE3Q6ZMZ3 975 aa14.95□□□□□ -0.02
PTPRK-203ENST00000368207 SIL1Q9H173 461 aa14.95□□□□□ -0.02
PTPRK-203ENST00000368207 SPG7Q9UQ90 795 aa14.95□□□□□ -0.02
PTPRK-203ENST00000368207 A2MP01023 1474 aa14.95□□□□□ -0.02
PTPRK-203ENST00000368207 PHF14O94880 888 aa14.94□□□□□ -0.02
PTPRK-203ENST00000368207 TRDNQ13061 729 aa14.94□□□□□ -0.02
PTPRK-203ENST00000368207 GNAT3A8MTJ3 354 aa14.94□□□□□ -0.02
PTPRK-203ENST00000368207 AKAP17AQ02040 695 aaKnown RBP14.94□□□□□ -0.02
PTPRK-203ENST00000368207 CREBRFQ8IUR6 639 aa14.94□□□□□ -0.02
PTPRK-203ENST00000368207 CNTROBQ8N137 903 aa14.94□□□□□ -0.02
PTPRK-203ENST00000368207 DUOX2Q9NRD8 1548 aa14.94□□□□□ -0.02
PTPRK-203ENST00000368207 SMC3Q9UQE7 1217 aa14.94□□□□□ -0.02
PTPRK-203ENST00000368207 TCOF1Q13428 1488 aaKnown RBP14.94□□□□□ -0.02
PTPRK-203ENST00000368207 DUSP27Q5VZP5 1158 aa14.93□□□□□ -0.02
PTPRK-203ENST00000368207 DNAJC2Q99543 621 aaKnown RBP14.93□□□□□ -0.02
PTPRK-203ENST00000368207 WDR7Q9Y4E6 1490 aa14.93□□□□□ -0.02
PTPRK-203ENST00000368207 FOSBP53539 338 aa14.93□□□□□ -0.02
PTPRK-203ENST00000368207 KCNH5Q8NCM2 988 aa14.93□□□□□ -0.02
PTPRK-203ENST00000368207 NFKBIBQ15653 356 aa14.93□□□□□ -0.02
PTPRK-203ENST00000368207 SKOR2Q2VWA4 1001 aaPredicted RBP14.93□□□□□ -0.02
PTPRK-203ENST00000368207 NINLQ9Y2I6 1382 aa14.93□□□□□ -0.02
PTPRK-203ENST00000368207 NEK4P51957 841 aa14.93□□□□□ -0.02
PTPRK-203ENST00000368207 DNAJC5Q9H3Z4 198 aa14.93□□□□□ -0.02
PTPRK-203ENST00000368207 ITSN2Q9NZM3 1697 aa14.92□□□□□ -0.02
PTPRK-203ENST00000368207 PPP6R1Q9UPN7 881 aa14.92□□□□□ -0.02
PTPRK-203ENST00000368207 TPM4P67936 248 aa14.92□□□□□ -0.02
PTPRK-203ENST00000368207 CHD1LQ86WJ1 897 aa14.92□□□□□ -0.02
PTPRK-203ENST00000368207 DISP1Q96F81 1524 aa14.92□□□□□ -0.02
PTPRK-203ENST00000368207 SRGAP3O43295 1099 aa14.91□□□□□ -0.02
PTPRK-203ENST00000368207 IL1RAPL2Q9NP60 686 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms