RNA–Protein interactions for RNA: ENST00000366553.2

CHML-201, Transcript of CHM like, Rab escort protein 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CHML, Length 7,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHML-201ENST00000366553 CCDC34Q96HJ3 373 aa13.74□□□□□ -0.21
CHML-201ENST00000366553 NASPP49321 788 aaPredicted RBP13.74□□□□□ -0.21
CHML-201ENST00000366553 CHD1LQ86WJ1 897 aa13.74□□□□□ -0.21
CHML-201ENST00000366553 TMEM57Q8N5G2 664 aa13.74□□□□□ -0.21
CHML-201ENST00000366553 RNF214Q8ND24 703 aa13.74□□□□□ -0.21
CHML-201ENST00000366553 GCC1Q96CN9 775 aa13.74□□□□□ -0.21
CHML-201ENST00000366553 THUMPD2Q9BTF0 503 aaKnown RBP13.74□□□□□ -0.21
CHML-201ENST00000366553 CNTROBQ8N137 903 aa13.74□□□□□ -0.21
CHML-201ENST00000366553 BCL11BQ9C0K0 894 aaPredicted RBP13.74□□□□□ -0.21
CHML-201ENST00000366553 RTEL1-TNFRSF6BF6WH68 1400 aa13.74□□□□□ -0.21
CHML-201ENST00000366553 GNAI2P04899 355 aa13.73□□□□□ -0.21
CHML-201ENST00000366553 ESCO1Q5FWF5 840 aa13.73□□□□□ -0.21
CHML-201ENST00000366553 NLRP2Q9NX02 1062 aa13.73□□□□□ -0.21
CHML-201ENST00000366553 WAPLQ7Z5K2 1190 aa13.73□□□□□ -0.21
CHML-201ENST00000366553 KIF21AQ7Z4S6 1674 aa13.73□□□□□ -0.21
CHML-201ENST00000366553 GAS2L2Q8NHY3 880 aa13.73□□□□□ -0.21
CHML-201ENST00000366553 DISP3Q9P2K9 1392 aa13.73□□□□□ -0.21
CHML-201ENST00000366553 NKTRP30414 1462 aaKnown RBP13.73□□□□□ -0.21
CHML-201ENST00000366553 G3V3G9 751 aa13.72□□□□□ -0.21
CHML-201ENST00000366553 DCAF8Q5TAQ9 597 aa13.72□□□□□ -0.21
CHML-201ENST00000366553 TPD52L1Q16890 204 aaPredicted RBP13.72□□□□□ -0.21
CHML-201ENST00000366553 MIS18AQ9NYP9 233 aa13.72□□□□□ -0.21
CHML-201ENST00000366553 AKAP17AQ02040 695 aaKnown RBP13.72□□□□□ -0.21
CHML-201ENST00000366553 HSP90AB4PQ58FF6 505 aa13.72□□□□□ -0.21
CHML-201ENST00000366553 NINLQ9Y2I6 1382 aa13.72□□□□□ -0.21
CHML-201ENST00000366553 PRPF40AO75400 957 aaKnown RBP13.72□□□□□ -0.21
CHML-201ENST00000366553 SLC52A1Q9NWF4 448 aa13.71□□□□□ -0.21
CHML-201ENST00000366553 DCTN1Q14203 1278 aa13.71□□□□□ -0.21
CHML-201ENST00000366553 LRRFIP1Q32MZ4 808 aaKnown RBP13.71□□□□□ -0.21
CHML-201ENST00000366553 KDM4AO75164 1064 aa13.71□□□□□ -0.21
CHML-201ENST00000366553 GNAI3P08754 354 aa13.71□□□□□ -0.21
CHML-201ENST00000366553 ATF3P18847 181 aa13.71□□□□□ -0.21
CHML-201ENST00000366553 SLC26A8Q96RN1 970 aa13.71□□□□□ -0.21
CHML-201ENST00000366553 CPLX1O14810 134 aa13.71□□□□□ -0.22
CHML-201ENST00000366553 ADGRF5Q8IZF2 1346 aa13.71□□□□□ -0.22
CHML-201ENST00000366553 SYNE3Q6ZMZ3 975 aa13.71□□□□□ -0.22
CHML-201ENST00000366553 CLASRPQ8N2M8 674 aaKnown RBP13.7□□□□□ -0.22
CHML-201ENST00000366553 FAM43AQ8N2R8 423 aa13.7□□□□□ -0.22
CHML-201ENST00000366553 FAM13BQ9NYF5 915 aa13.7□□□□□ -0.22
CHML-201ENST00000366553 MRE11P49959 708 aa13.7□□□□□ -0.22
CHML-201ENST00000366553 TMX4Q9H1E5 349 aaPredicted RBP13.7□□□□□ -0.22
CHML-201ENST00000366553 TRIM29Q14134 588 aa13.69□□□□□ -0.22
CHML-201ENST00000366553 HDGFL1Q5TGJ6 251 aa13.69□□□□□ -0.22
CHML-201ENST00000366553 GPATCH8Q9UKJ3 1502 aaKnown RBP13.69□□□□□ -0.22
CHML-201ENST00000366553 SASS6Q6UVJ0 657 aa13.69□□□□□ -0.22
CHML-201ENST00000366553 CCAR2Q8N163 923 aaKnown RBP13.69□□□□□ -0.22
CHML-201ENST00000366553 RARSP54136 660 aaKnown RBP13.69□□□□□ -0.22
CHML-201ENST00000366553 TRDNQ13061 729 aa13.69□□□□□ -0.22
CHML-201ENST00000366553 GPRASP1Q5JY77 1395 aa13.69□□□□□ -0.22
CHML-201ENST00000366553 NFXL1Q6ZNB6 911 aa13.69□□□□□ -0.22
CHML-201ENST00000366553 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.69□□□□□ -0.22
CHML-201ENST00000366553 DUSP27Q5VZP5 1158 aa13.68□□□□□ -0.22
CHML-201ENST00000366553 CT47B1P0C2W7 299 aaPredicted RBP13.68□□□□□ -0.22
CHML-201ENST00000366553 FSD1Q9BTV5 496 aa13.68□□□□□ -0.22
CHML-201ENST00000366553 WASHC4Q2M389 1173 aa13.68□□□□□ -0.22
CHML-201ENST00000366553 ZNF692Q9BU19 519 aaPredicted RBP13.68□□□□□ -0.22
CHML-201ENST00000366553 SIL1Q9H173 461 aa13.68□□□□□ -0.22
CHML-201ENST00000366553 PBRM1Q86U86 1689 aa13.67□□□□□ -0.22
CHML-201ENST00000366553 LRRCC1Q9C099 1032 aa13.67□□□□□ -0.22
CHML-201ENST00000366553 CPLX2Q6PUV4 134 aaKnown RBP13.67□□□□□ -0.22
CHML-201ENST00000366553 DNAJC2Q99543 621 aaKnown RBP13.67□□□□□ -0.22
CHML-201ENST00000366553 RABEP1Q15276 862 aa13.67□□□□□ -0.22
CHML-201ENST00000366553 VPS53Q5VIR6 699 aa13.67□□□□□ -0.22
CHML-201ENST00000366553 VPS37DQ86XT2 251 aa13.67□□□□□ -0.22
CHML-201ENST00000366553 NOC3LQ8WTT2 800 aaKnown RBP13.67□□□□□ -0.22
CHML-201ENST00000366553 SSH1Q8WYL5 1049 aa13.67□□□□□ -0.22
CHML-201ENST00000366553 K7ELQ4 463 aaPredicted RBP13.67□□□□□ -0.22
CHML-201ENST00000366553 MARCH6O60337 910 aa13.67□□□□□ -0.22
CHML-201ENST00000366553 NFE2L2Q16236 605 aa13.67□□□□□ -0.22
CHML-201ENST00000366553 FCHSD2O94868 740 aa13.66□□□□□ -0.22
CHML-201ENST00000366553 MYL6BP14649 208 aa13.66□□□□□ -0.22
CHML-201ENST00000366553 RPGRIP1LQ68CZ1 1315 aa13.66□□□□□ -0.22
CHML-201ENST00000366553 MCM10Q7L590 875 aa13.66□□□□□ -0.22
CHML-201ENST00000366553 ATAD2Q6PL18 1390 aa13.66□□□□□ -0.22
CHML-201ENST00000366553 ADGRL1O94910 1474 aa13.66□□□□□ -0.22
CHML-201ENST00000366553 CCT4P50991 539 aaKnown RBP13.66□□□□□ -0.22
CHML-201ENST00000366553 NUDT16Q96DE0 195 aaKnown RBP13.66□□□□□ -0.22
CHML-201ENST00000366553 PLEKHO1Q53GL0 409 aaPredicted RBP13.65□□□□□ -0.22
CHML-201ENST00000366553 CHMP4CQ96CF2 233 aa13.65□□□□□ -0.22
CHML-201ENST00000366553 PDE4CQ08493 712 aa13.65□□□□□ -0.23
CHML-201ENST00000366553 R3HCC1Q9Y3T6 440 aaKnown RBP13.64□□□□□ -0.23
CHML-201ENST00000366553 SMARCA5O60264 1052 aaPredicted RBP13.64□□□□□ -0.23
CHML-201ENST00000366553 FYB1O15117 783 aa13.64□□□□□ -0.23
CHML-201ENST00000366553 CEBPZQ03701 1054 aaKnown RBP13.64□□□□□ -0.23
CHML-201ENST00000366553 NCBP3Q53F19 620 aaKnown RBP13.64□□□□□ -0.23
CHML-201ENST00000366553 FIBPO43427 364 aa13.64□□□□□ -0.23
CHML-201ENST00000366553 PSMA5P28066 241 aa13.64□□□□□ -0.23
CHML-201ENST00000366553 VSIG10Q8N0Z9 540 aa13.64□□□□□ -0.23
CHML-201ENST00000366553 FAM177BA6PVY3 158 aa13.63□□□□□ -0.23
CHML-201ENST00000366553 RAD21O60216 631 aa13.63□□□□□ -0.23
CHML-201ENST00000366553 STK3Q13188 491 aa13.63□□□□□ -0.23
CHML-201ENST00000366553 TPM3P06753 285 aa13.63□□□□□ -0.23
CHML-201ENST00000366553 IL1RAPL2Q9NP60 686 aa13.63□□□□□ -0.23
CHML-201ENST00000366553 SCAF11Q99590 1463 aaKnown RBP13.63□□□□□ -0.23
CHML-201ENST00000366553 XPCQ01831 940 aaPredicted RBP13.63□□□□□ -0.23
CHML-201ENST00000366553 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.63□□□□□ -0.23
CHML-201ENST00000366553 RALYLQ86SE5 291 aaKnown RBP13.63□□□□□ -0.23
CHML-201ENST00000366553 MPNDQ8N594 471 aa13.63□□□□□ -0.23
CHML-201ENST00000366553 CD109Q6YHK3 1445 aa13.63□□□□□ -0.23
CHML-201ENST00000366553 NOS1P29475 1434 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms