RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 PLEKHG5O94827 1062 aa14.82□□□□□ -0.04
YBX3-203ENST00000366286 CABLES1Q8TDN4 633 aa14.82□□□□□ -0.04
YBX3-203ENST00000366286 HAP1P54257 671 aaPredicted RBP14.81□□□□□ -0.04
YBX3-203ENST00000366286 SRPK2P78362 688 aaKnown RBP14.81□□□□□ -0.04
YBX3-203ENST00000366286 CCDC61Q9Y6R9 512 aa14.81□□□□□ -0.04
YBX3-203ENST00000366286 GLI3P10071 1580 aa14.81□□□□□ -0.04
YBX3-203ENST00000366286 RBM6P78332 1123 aaKnown RBP14.8□□□□□ -0.04
YBX3-203ENST00000366286 CABP2Q9NPB3 220 aa14.8□□□□□ -0.04
YBX3-203ENST00000366286 TRPC5Q9UL62 973 aaPredicted RBP14.8□□□□□ -0.04
YBX3-203ENST00000366286 ACEP12821 1306 aa14.8□□□□□ -0.04
YBX3-203ENST00000366286 NRKQ7Z2Y5 1582 aa14.8□□□□□ -0.04
YBX3-203ENST00000366286 PAK3O75914 559 aaPredicted RBP14.79□□□□□ -0.04
YBX3-203ENST00000366286 BRWD3Q6RI45 1802 aa14.78□□□□□ -0.04
YBX3-203ENST00000366286 MON2Q7Z3U7 1717 aa14.78□□□□□ -0.04
YBX3-203ENST00000366286 EVC2Q86UK5 1308 aa14.78□□□□□ -0.04
YBX3-203ENST00000366286 PLEKHG3A1L390 1219 aa14.78□□□□□ -0.04
YBX3-203ENST00000366286 PIK3C2AO00443 1686 aa14.77□□□□□ -0.04
YBX3-203ENST00000366286 SBNO2Q9Y2G9 1366 aa14.77□□□□□ -0.04
YBX3-203ENST00000366286 CARD11Q9BXL7 1154 aa14.77□□□□□ -0.05
YBX3-203ENST00000366286 UNC5CLQ8IV45 518 aa14.75□□□□□ -0.05
YBX3-203ENST00000366286 USP6P35125 1406 aa14.75□□□□□ -0.05
YBX3-203ENST00000366286 PCGF6Q9BYE7 350 aa14.74□□□□□ -0.05
YBX3-203ENST00000366286 CABP1Q9NZU7 370 aa14.73□□□□□ -0.05
YBX3-203ENST00000366286 ATAD2Q6PL18 1390 aa14.73□□□□□ -0.05
YBX3-203ENST00000366286 LMO7Q8WWI1 1683 aa14.72□□□□□ -0.05
YBX3-203ENST00000366286 FAM83GA6ND36 823 aa14.72□□□□□ -0.05
YBX3-203ENST00000366286 NUTM2GQ5VZR2 741 aa14.72□□□□□ -0.05
YBX3-203ENST00000366286 GJD4Q96KN9 370 aaPredicted RBP14.72□□□□□ -0.05
YBX3-203ENST00000366286 BRD4O60885 1362 aaPredicted RBP14.72□□□□□ -0.05
YBX3-203ENST00000366286 SLIT3O75094 1523 aa14.71□□□□□ -0.06
YBX3-203ENST00000366286 USP54Q70EL1 1684 aa14.71□□□□□ -0.06
YBX3-203ENST00000366286 USP19O94966 1318 aa14.7□□□□□ -0.06
YBX3-203ENST00000366286 CLSPNQ9HAW4 1339 aa14.7□□□□□ -0.06
YBX3-203ENST00000366286 SSH2Q76I76 1423 aa14.7□□□□□ -0.06
YBX3-203ENST00000366286 KIAA0232Q92628 1395 aa14.7□□□□□ -0.06
YBX3-203ENST00000366286 VPS72Q15906 364 aa14.69□□□□□ -0.06
YBX3-203ENST00000366286 ABTB2Q8N961 1025 aa14.69□□□□□ -0.06
YBX3-203ENST00000366286 UPF1Q92900 1129 aaKnown RBP eCLIP14.69□□□□□ -0.06
YBX3-203ENST00000366286 PRDM11Q9NQV5 511 aa14.69□□□□□ -0.06
YBX3-203ENST00000366286 CPSF1Q10570 1443 aaKnown RBP14.68□□□□□ -0.06
YBX3-203ENST00000366286 BTG4Q9NY30 223 aa14.68□□□□□ -0.06
YBX3-203ENST00000366286 CD163L1Q9NR16 1453 aa14.68□□□□□ -0.06
YBX3-203ENST00000366286 THSD7AQ9UPZ6 1657 aa14.68□□□□□ -0.06
YBX3-203ENST00000366286 EP400Q96L91 3159 aa14.67□□□□□ -0.06
YBX3-203ENST00000366286 RGPD5Q99666 1765 aa14.67□□□□□ -0.06
YBX3-203ENST00000366286 COL18A1P39060 1754 aa14.66□□□□□ -0.06
YBX3-203ENST00000366286 CPDO75976 1380 aa14.66□□□□□ -0.06
YBX3-203ENST00000366286 CHRNA2Q15822 529 aa14.66□□□□□ -0.06
YBX3-203ENST00000366286 CCDC9Q9Y3X0 531 aaKnown RBP14.66□□□□□ -0.06
YBX3-203ENST00000366286 CAMTA1Q9Y6Y1 1673 aa14.65□□□□□ -0.06
YBX3-203ENST00000366286 KTN1Q86UP2 1357 aaKnown RBP14.65□□□□□ -0.06
YBX3-203ENST00000366286 USP47Q96K76 1375 aa14.65□□□□□ -0.06
YBX3-203ENST00000366286 WNK3Q9BYP7 1800 aa14.65□□□□□ -0.06
YBX3-203ENST00000366286 ZC3H6P61129 1189 aaKnown RBP14.65□□□□□ -0.06
YBX3-203ENST00000366286 NLRP13Q86W25 1043 aa14.65□□□□□ -0.06
YBX3-203ENST00000366286 LTN1O94822 1766 aa14.65□□□□□ -0.06
YBX3-203ENST00000366286 ST20-MTHFSA0A0A6YYL1 179 aa14.64□□□□□ -0.07
YBX3-203ENST00000366286 TESK2Q96S53 571 aa14.64□□□□□ -0.07
YBX3-203ENST00000366286 TTC21BQ7Z4L5 1316 aa14.64□□□□□ -0.07
YBX3-203ENST00000366286 NFAT5O94916 1531 aa14.63□□□□□ -0.07
YBX3-203ENST00000366286 MYOM1P52179 1685 aa14.63□□□□□ -0.07
YBX3-203ENST00000366286 NLRP6P59044 892 aa14.63□□□□□ -0.07
YBX3-203ENST00000366286 ZNF692Q9BU19 519 aaPredicted RBP14.63□□□□□ -0.07
YBX3-203ENST00000366286 TTC21AQ8NDW8 1320 aa14.63□□□□□ -0.07
YBX3-203ENST00000366286 GCP02774 474 aa14.62□□□□□ -0.07
YBX3-203ENST00000366286 TIMELESSQ9UNS1 1208 aa14.62□□□□□ -0.07
YBX3-203ENST00000366286 SPATA31A5Q5VU36 1347 aa14.62□□□□□ -0.07
YBX3-203ENST00000366286 SPATA31A7Q8IWB4 1347 aa14.62□□□□□ -0.07
YBX3-203ENST00000366286 SEPT12Q8IYM1 358 aa14.61□□□□□ -0.07
YBX3-203ENST00000366286 TMC1Q8TDI8 760 aa14.61□□□□□ -0.07
YBX3-203ENST00000366286 COL5A2P05997 1499 aaPredicted RBP14.61□□□□□ -0.07
YBX3-203ENST00000366286 A0A1W2PP64 1363 aa14.6□□□□□ -0.07
YBX3-203ENST00000366286 EDC4Q6P2E9 1401 aaKnown RBP14.6□□□□□ -0.07
YBX3-203ENST00000366286 FAM98CQ17RN3 349 aaKnown RBP14.6□□□□□ -0.07
YBX3-203ENST00000366286 CCER1Q8TC90 406 aaPredicted RBP14.6□□□□□ -0.07
YBX3-203ENST00000366286 STRN4Q9NRL3 753 aa14.6□□□□□ -0.07
YBX3-203ENST00000366286 NINLQ9Y2I6 1382 aa14.6□□□□□ -0.07
YBX3-203ENST00000366286 KIF20BQ96Q89 1820 aa14.59□□□□□ -0.07
YBX3-203ENST00000366286 PARP4Q9UKK3 1724 aaKnown RBP14.59□□□□□ -0.07
YBX3-203ENST00000366286 A0A0G2JS52 829 aa14.59□□□□□ -0.07
YBX3-203ENST00000366286 ONECUT3O60422 494 aaPredicted RBP14.59□□□□□ -0.07
YBX3-203ENST00000366286 MYT1Q01538 1121 aa14.59□□□□□ -0.07
YBX3-203ENST00000366286 PUS7Q96PZ0 661 aaKnown RBP14.59□□□□□ -0.07
YBX3-203ENST00000366286 SLC12A5Q9H2X9 1139 aa14.59□□□□□ -0.07
YBX3-203ENST00000366286 RGPD1P0DJD0 1748 aa14.58□□□□□ -0.07
YBX3-203ENST00000366286 ABCC6O95255 1503 aa14.58□□□□□ -0.08
YBX3-203ENST00000366286 HDGFL2Q7Z4V5 671 aaPredicted RBP14.58□□□□□ -0.08
YBX3-203ENST00000366286 SPATA31A1Q5TZJ5 1347 aa14.58□□□□□ -0.08
YBX3-203ENST00000366286 AATKQ6ZMQ8 1374 aa14.58□□□□□ -0.08
YBX3-203ENST00000366286 ZBTB7CA1YPR0 619 aa14.57□□□□□ -0.08
YBX3-203ENST00000366286 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.57□□□□□ -0.08
YBX3-203ENST00000366286 TNS1Q9HBL0 1735 aaKnown RBP14.57□□□□□ -0.08
YBX3-203ENST00000366286 USP31Q70CQ4 1352 aa14.57□□□□□ -0.08
YBX3-203ENST00000366286 NME9Q86XW9 330 aa14.56□□□□□ -0.08
YBX3-203ENST00000366286 TERF2IPQ9NYB0 399 aa14.56□□□□□ -0.08
YBX3-203ENST00000366286 LRRC37A3O60309 1634 aa14.55□□□□□ -0.08
YBX3-203ENST00000366286 SOX12O15370 315 aa14.55□□□□□ -0.08
YBX3-203ENST00000366286 SLC24A1O60721 1099 aa14.55□□□□□ -0.08
YBX3-203ENST00000366286 EVA1CP58658 441 aa14.55□□□□□ -0.08
YBX3-203ENST00000366286 TMF1P82094 1093 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms