RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 AMER1Q5JTC6 1135 aaPredicted RBP24.39■■□□□ 1.49
CMTM3-201ENST00000361909 ADAMTS8Q9UP79 889 aa24.39■■□□□ 1.49
CMTM3-201ENST00000361909 NGEFQ8N5V2 710 aa24.38■■□□□ 1.49
CMTM3-201ENST00000361909 TRMT2AQ8IZ69 625 aaKnown RBP24.37■■□□□ 1.49
CMTM3-201ENST00000361909 SLFN5Q08AF3 891 aa24.37■■□□□ 1.49
CMTM3-201ENST00000361909 USP19O94966 1318 aa24.37■■□□□ 1.49
CMTM3-201ENST00000361909 ATAD2Q6PL18 1390 aa24.37■■□□□ 1.49
CMTM3-201ENST00000361909 RGS3P49796 1198 aa24.36■■□□□ 1.49
CMTM3-201ENST00000361909 CGNL1Q0VF96 1302 aa24.36■■□□□ 1.49
CMTM3-201ENST00000361909 MINK1Q8N4C8 1332 aaPredicted RBP24.36■■□□□ 1.49
CMTM3-201ENST00000361909 WAPLQ7Z5K2 1190 aa24.34■■□□□ 1.49
CMTM3-201ENST00000361909 SLC12A5Q9H2X9 1139 aa24.34■■□□□ 1.49
CMTM3-201ENST00000361909 CABP2Q9NPB3 220 aa24.33■■□□□ 1.49
CMTM3-201ENST00000361909 SRPK2P78362 688 aaKnown RBP24.33■■□□□ 1.48
CMTM3-201ENST00000361909 AAMPQ13685 434 aa24.33■■□□□ 1.48
CMTM3-201ENST00000361909 CARD14Q9BXL6 1004 aa24.33■■□□□ 1.48
CMTM3-201ENST00000361909 ANKLE2Q86XL3 938 aa24.32■■□□□ 1.48
CMTM3-201ENST00000361909 ANKRD36BQ8N2N9 1353 aa24.31■■□□□ 1.48
CMTM3-201ENST00000361909 PPP2R1AP30153 589 aa24.31■■□□□ 1.48
CMTM3-201ENST00000361909 CDK19Q9BWU1 502 aa24.31■■□□□ 1.48
CMTM3-201ENST00000361909 PDE3AQ14432 1141 aa24.3■■□□□ 1.48
CMTM3-201ENST00000361909 SLC26A8Q96RN1 970 aa24.3■■□□□ 1.48
CMTM3-201ENST00000361909 USP32Q8NFA0 1604 aa24.29■■□□□ 1.48
CMTM3-201ENST00000361909 PIK3R4Q99570 1358 aa24.29■■□□□ 1.48
CMTM3-201ENST00000361909 PTPRUQ92729 1446 aa24.27■■□□□ 1.48
CMTM3-201ENST00000361909 ROBO2Q9HCK4 1378 aa24.27■■□□□ 1.48
CMTM3-201ENST00000361909 ANTXR1Q9H6X2 564 aa24.27■■□□□ 1.48
CMTM3-201ENST00000361909 UPF2Q9HAU5 1272 aaKnown RBP24.27■■□□□ 1.48
CMTM3-201ENST00000361909 E9PSI1 815 aa24.26■■□□□ 1.47
CMTM3-201ENST00000361909 RRAGDQ9NQL2 400 aaPredicted RBP24.26■■□□□ 1.47
CMTM3-201ENST00000361909 NSD3Q9BZ95 1437 aa24.26■■□□□ 1.47
CMTM3-201ENST00000361909 PTCH1Q13635 1447 aa24.25■■□□□ 1.47
CMTM3-201ENST00000361909 WASLO00401 505 aaPredicted RBP24.25■■□□□ 1.47
CMTM3-201ENST00000361909 ADGRB2O60241 1585 aa24.24■■□□□ 1.47
CMTM3-201ENST00000361909 AMOTL2Q9Y2J4 779 aa24.24■■□□□ 1.47
CMTM3-201ENST00000361909 CLCN1P35523 988 aa24.23■■□□□ 1.47
CMTM3-201ENST00000361909 FSD2A1L4K1 749 aa24.23■■□□□ 1.47
CMTM3-201ENST00000361909 TERF2IPQ9NYB0 399 aa24.23■■□□□ 1.47
CMTM3-201ENST00000361909 XRN1Q8IZH2 1706 aaKnown RBP24.22■■□□□ 1.47
CMTM3-201ENST00000361909 GOLGA6L3A6NEY3 463 aa24.21■■□□□ 1.47
CMTM3-201ENST00000361909 CLUAP1Q96AJ1 413 aa24.21■■□□□ 1.47
CMTM3-201ENST00000361909 NSD2O96028 1365 aa24.21■■□□□ 1.47
CMTM3-201ENST00000361909 ISY1Q9ULR0 285 aaKnown RBP24.2■■□□□ 1.46
CMTM3-201ENST00000361909 A0A1W2PP64 1363 aa24.19■■□□□ 1.46
CMTM3-201ENST00000361909 CD163L1Q9NR16 1453 aa24.19■■□□□ 1.46
CMTM3-201ENST00000361909 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.19■■□□□ 1.46
CMTM3-201ENST00000361909 ATP7BP35670 1465 aa24.19■■□□□ 1.46
CMTM3-201ENST00000361909 PMFBP1Q8TBY8 1022 aa24.18■■□□□ 1.46
CMTM3-201ENST00000361909 TBC1D32Q96NH3 1257 aa24.18■■□□□ 1.46
CMTM3-201ENST00000361909 PNNQ9H307 717 aaKnown RBP24.18■■□□□ 1.46
CMTM3-201ENST00000361909 IGHDP01880 384 aa24.17■■□□□ 1.46
CMTM3-201ENST00000361909 HDGFL2Q7Z4V5 671 aaPredicted RBP24.17■■□□□ 1.46
CMTM3-201ENST00000361909 RRP9O43818 475 aaKnown RBP24.16■■□□□ 1.46
CMTM3-201ENST00000361909 CABP1Q9NZU7 370 aa24.16■■□□□ 1.46
CMTM3-201ENST00000361909 SLKQ9H2G2 1235 aaPredicted RBP24.15■■□□□ 1.46
CMTM3-201ENST00000361909 CHD2O14647 1828 aaKnown RBP24.15■■□□□ 1.46
CMTM3-201ENST00000361909 NPHP4O75161 1426 aaPredicted RBP24.14■■□□□ 1.46
CMTM3-201ENST00000361909 CCDC61Q9Y6R9 512 aa24.14■■□□□ 1.45
CMTM3-201ENST00000361909 NUDT16Q96DE0 195 aaKnown RBP24.13■■□□□ 1.45
CMTM3-201ENST00000361909 XRCC6P12956 609 aaKnown RBP eCLIP24.13■■□□□ 1.45
CMTM3-201ENST00000361909 PKNOX2Q96KN3 472 aa24.12■■□□□ 1.45
CMTM3-201ENST00000361909 PPIP5K1Q6PFW1 1433 aa24.11■■□□□ 1.45
CMTM3-201ENST00000361909 BCAR3O75815 825 aa24.11■■□□□ 1.45
CMTM3-201ENST00000361909 SEC24BO95487 1268 aa24.11■■□□□ 1.45
CMTM3-201ENST00000361909 MCM4P33991 863 aa24.11■■□□□ 1.45
CMTM3-201ENST00000361909 MRE11P49959 708 aa24.11■■□□□ 1.45
CMTM3-201ENST00000361909 MORC1Q86VD1 984 aa24.11■■□□□ 1.45
CMTM3-201ENST00000361909 CPSF1Q10570 1443 aaKnown RBP24.11■■□□□ 1.45
CMTM3-201ENST00000361909 TBC1D2Q9BYX2 928 aa24.1■■□□□ 1.45
CMTM3-201ENST00000361909 KCNA6P17658 529 aa24.09■■□□□ 1.45
CMTM3-201ENST00000361909 HSP90AA1P07900 732 aaKnown RBP24.08■■□□□ 1.45
CMTM3-201ENST00000361909 NAP1L5Q96NT1 182 aaPredicted RBP24.08■■□□□ 1.45
CMTM3-201ENST00000361909 CHMP5Q9NZZ3 219 aa24.08■■□□□ 1.44
CMTM3-201ENST00000361909 CDC42BPGQ6DT37 1551 aa24.07■■□□□ 1.44
CMTM3-201ENST00000361909 CANXP27824 592 aaKnown RBP24.07■■□□□ 1.44
CMTM3-201ENST00000361909 ANKRD26Q9UPS8 1709 aa24.07■■□□□ 1.44
CMTM3-201ENST00000361909 APAF1O14727 1248 aa24.06■■□□□ 1.44
CMTM3-201ENST00000361909 ZNF692Q9BU19 519 aaPredicted RBP24.06■■□□□ 1.44
CMTM3-201ENST00000361909 SPINK5Q9NQ38 1064 aaPredicted RBP24.06■■□□□ 1.44
CMTM3-201ENST00000361909 TOPAZ1Q8N9V7 1692 aa24.06■■□□□ 1.44
CMTM3-201ENST00000361909 PRR36Q9H6K5 1346 aa24.05■■□□□ 1.44
CMTM3-201ENST00000361909 DDX11L8A8MPP1 907 aa24.05■■□□□ 1.44
CMTM3-201ENST00000361909 EDC4Q6P2E9 1401 aaKnown RBP24.04■■□□□ 1.44
CMTM3-201ENST00000361909 POLR3AO14802 1390 aaPredicted RBP24.04■■□□□ 1.44
CMTM3-201ENST00000361909 FYB1O15117 783 aa24.04■■□□□ 1.44
CMTM3-201ENST00000361909 HSP90AA2PQ14568 343 aaPredicted RBP24.04■■□□□ 1.44
CMTM3-201ENST00000361909 NCKAP5LQ9HCH0 1330 aa24.04■■□□□ 1.44
CMTM3-201ENST00000361909 AKAP12Q02952 1782 aa24.04■■□□□ 1.44
CMTM3-201ENST00000361909 KDM4FA0A1W2PPD8 638 aa24.03■■□□□ 1.44
CMTM3-201ENST00000361909 PLEKHG3A1L390 1219 aa24.03■■□□□ 1.44
CMTM3-201ENST00000361909 KIF20BQ96Q89 1820 aa24.03■■□□□ 1.44
CMTM3-201ENST00000361909 MON2Q7Z3U7 1717 aa24.02■■□□□ 1.44
CMTM3-201ENST00000361909 ITSN1Q15811 1721 aa24.02■■□□□ 1.44
CMTM3-201ENST00000361909 CCDC146Q8IYE0 955 aa24.01■■□□□ 1.43
CMTM3-201ENST00000361909 COG6Q9Y2V7 657 aa24.01■■□□□ 1.43
CMTM3-201ENST00000361909 NWD1Q149M9 1564 aa24■■□□□ 1.43
CMTM3-201ENST00000361909 ANKARQ7Z5J8 1434 aa24■■□□□ 1.43
CMTM3-201ENST00000361909 TRAK2O60296 914 aa23.99■■□□□ 1.43
CMTM3-201ENST00000361909 RWDD1Q9H446 243 aaPredicted RBP23.99■■□□□ 1.43
CMTM3-201ENST00000361909 PTMSP20962 102 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms