RNA–Protein interactions for RNA: ENST00000361530.10

CNKSR1-201, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-201ENST00000361530 BRPF3Q9ULD4 1205 aa19.87■□□□□ 0.77
CNKSR1-201ENST00000361530 COL3A1P02461 1466 aaPredicted RBP19.86■□□□□ 0.77
CNKSR1-201ENST00000361530 FBXO31Q5XUX0 539 aaPredicted RBP19.86■□□□□ 0.77
CNKSR1-201ENST00000361530 RWDD1Q9H446 243 aaPredicted RBP19.86■□□□□ 0.77
CNKSR1-201ENST00000361530 NLRP1Q9C000 1473 aa19.86■□□□□ 0.77
CNKSR1-201ENST00000361530 DZIP1LQ8IYY4 767 aaKnown RBP19.86■□□□□ 0.77
CNKSR1-201ENST00000361530 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.86■□□□□ 0.77
CNKSR1-201ENST00000361530 POGKQ9P215 609 aa19.86■□□□□ 0.77
CNKSR1-201ENST00000361530 CD163L1Q9NR16 1453 aa19.85■□□□□ 0.77
CNKSR1-201ENST00000361530 TERF2IPQ9NYB0 399 aa19.85■□□□□ 0.77
CNKSR1-201ENST00000361530 FTSJ3Q8IY81 847 aaKnown RBP19.84■□□□□ 0.77
CNKSR1-201ENST00000361530 SSH1Q8WYL5 1049 aa19.84■□□□□ 0.77
CNKSR1-201ENST00000361530 SMC4Q9NTJ3 1288 aa19.84■□□□□ 0.77
CNKSR1-201ENST00000361530 RICTORQ6R327 1708 aa19.84■□□□□ 0.77
CNKSR1-201ENST00000361530 TMEM131LA2VDJ0 1609 aa19.84■□□□□ 0.77
CNKSR1-201ENST00000361530 YTHDC2Q9H6S0 1430 aaKnown RBP19.83■□□□□ 0.77
CNKSR1-201ENST00000361530 ATAD2Q6PL18 1390 aa19.83■□□□□ 0.77
CNKSR1-201ENST00000361530 TRIM27P14373 513 aa19.83■□□□□ 0.76
CNKSR1-201ENST00000361530 CT47B1P0C2W7 299 aaPredicted RBP19.82■□□□□ 0.76
CNKSR1-201ENST00000361530 CDK19Q9BWU1 502 aa19.81■□□□□ 0.76
CNKSR1-201ENST00000361530 RIPK4P57078 832 aa19.81■□□□□ 0.76
CNKSR1-201ENST00000361530 CABP1Q9NZU7 370 aa19.81■□□□□ 0.76
CNKSR1-201ENST00000361530 PREX1Q8TCU6 1659 aa19.8■□□□□ 0.76
CNKSR1-201ENST00000361530 FBLN1P23142 703 aa19.8■□□□□ 0.76
CNKSR1-201ENST00000361530 DIAPH1O60610 1272 aaKnown RBP19.79■□□□□ 0.76
CNKSR1-201ENST00000361530 NOB1Q9ULX3 412 aaKnown RBP19.79■□□□□ 0.76
CNKSR1-201ENST00000361530 MED14O60244 1454 aa19.78■□□□□ 0.76
CNKSR1-201ENST00000361530 ATF7IPQ6VMQ6 1270 aa19.78■□□□□ 0.76
CNKSR1-201ENST00000361530 TBC1D32Q96NH3 1257 aa19.78■□□□□ 0.76
CNKSR1-201ENST00000361530 ZMYM3Q14202 1370 aa19.78■□□□□ 0.76
CNKSR1-201ENST00000361530 HDGFL2Q7Z4V5 671 aaPredicted RBP19.77■□□□□ 0.76
CNKSR1-201ENST00000361530 ITPRIPQ8IWB1 547 aa19.77■□□□□ 0.76
CNKSR1-201ENST00000361530 PNPLA6Q8IY17 1366 aa19.77■□□□□ 0.76
CNKSR1-201ENST00000361530 IL16Q14005 1332 aa19.77■□□□□ 0.75
CNKSR1-201ENST00000361530 PKNOX2Q96KN3 472 aa19.76■□□□□ 0.75
CNKSR1-201ENST00000361530 BECN1Q14457 450 aa19.76■□□□□ 0.75
CNKSR1-201ENST00000361530 SLKQ9H2G2 1235 aaPredicted RBP19.76■□□□□ 0.75
CNKSR1-201ENST00000361530 ARHGEF40Q8TER5 1519 aa19.76■□□□□ 0.75
CNKSR1-201ENST00000361530 ALKQ9UM73 1620 aa19.76■□□□□ 0.75
CNKSR1-201ENST00000361530 CLTCQ00610 1675 aaKnown RBP19.75■□□□□ 0.75
CNKSR1-201ENST00000361530 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.75■□□□□ 0.75
CNKSR1-201ENST00000361530 TMEM57Q8N5G2 664 aa19.75■□□□□ 0.75
CNKSR1-201ENST00000361530 ANKRD26Q9UPS8 1709 aa19.75■□□□□ 0.75
CNKSR1-201ENST00000361530 WAPLQ7Z5K2 1190 aa19.74■□□□□ 0.75
CNKSR1-201ENST00000361530 UPF2Q9HAU5 1272 aaKnown RBP19.74■□□□□ 0.75
CNKSR1-201ENST00000361530 DDX19BQ9UMR2 479 aa19.74■□□□□ 0.75
CNKSR1-201ENST00000361530 HDAC1Q13547 482 aaPredicted RBP19.74■□□□□ 0.75
CNKSR1-201ENST00000361530 STAG3Q9UJ98 1225 aa19.73■□□□□ 0.75
CNKSR1-201ENST00000361530 TBC1D2Q9BYX2 928 aa19.72■□□□□ 0.75
CNKSR1-201ENST00000361530 POLKQ9UBT6 870 aa19.72■□□□□ 0.75
CNKSR1-201ENST00000361530 ANTXR1Q9H6X2 564 aa19.72■□□□□ 0.75
CNKSR1-201ENST00000361530 ZBTB40Q9NUA8 1239 aa19.72■□□□□ 0.75
CNKSR1-201ENST00000361530 FCHSD2O94868 740 aa19.71■□□□□ 0.75
CNKSR1-201ENST00000361530 PRKAR2BP31323 418 aa19.71■□□□□ 0.75
CNKSR1-201ENST00000361530 RSPH6AQ9H0K4 717 aa19.71■□□□□ 0.75
CNKSR1-201ENST00000361530 PNNQ9H307 717 aaKnown RBP19.7■□□□□ 0.74
CNKSR1-201ENST00000361530 SMC5Q8IY18 1101 aa19.69■□□□□ 0.74
CNKSR1-201ENST00000361530 PHACTR3Q96KR7 559 aa19.69■□□□□ 0.74
CNKSR1-201ENST00000361530 LRRC7Q96NW7 1537 aa19.68■□□□□ 0.74
CNKSR1-201ENST00000361530 HMOX1P09601 288 aa19.68■□□□□ 0.74
CNKSR1-201ENST00000361530 THUMPD2Q9BTF0 503 aaKnown RBP19.68■□□□□ 0.74
CNKSR1-201ENST00000361530 KIF16BQ96L93 1317 aa19.67■□□□□ 0.74
CNKSR1-201ENST00000361530 IPO8O15397 1037 aaKnown RBP19.67■□□□□ 0.74
CNKSR1-201ENST00000361530 KIF20BQ96Q89 1820 aa19.66■□□□□ 0.74
CNKSR1-201ENST00000361530 MFAP1P55081 439 aaKnown RBP19.66■□□□□ 0.74
CNKSR1-201ENST00000361530 ALDH1L2Q3SY69 923 aa19.66■□□□□ 0.74
CNKSR1-201ENST00000361530 CYB5RLQ6IPT4 315 aa19.66■□□□□ 0.74
CNKSR1-201ENST00000361530 FAM135BQ49AJ0 1406 aa19.66■□□□□ 0.74
CNKSR1-201ENST00000361530 EMILIN1Q9Y6C2 1016 aa19.65■□□□□ 0.74
CNKSR1-201ENST00000361530 C22orf23Q9BZE7 217 aa19.65■□□□□ 0.74
CNKSR1-201ENST00000361530 SPRYD3Q8NCJ5 442 aa19.64■□□□□ 0.73
CNKSR1-201ENST00000361530 ZRANB1Q9UGI0 708 aa19.64■□□□□ 0.73
CNKSR1-201ENST00000361530 CDC42BPGQ6DT37 1551 aa19.64■□□□□ 0.73
CNKSR1-201ENST00000361530 A2ML1A8K2U0 1454 aa19.63■□□□□ 0.73
CNKSR1-201ENST00000361530 NFE2L2Q16236 605 aa19.63■□□□□ 0.73
CNKSR1-201ENST00000361530 TSPYL6Q8N831 410 aa19.63■□□□□ 0.73
CNKSR1-201ENST00000361530 NME9Q86XW9 330 aa19.62■□□□□ 0.73
CNKSR1-201ENST00000361530 VAMP4O75379 141 aa19.62■□□□□ 0.73
CNKSR1-201ENST00000361530 FAM69CQ0P6D2 419 aa19.62■□□□□ 0.73
CNKSR1-201ENST00000361530 NUCB1Q02818 461 aa19.61■□□□□ 0.73
CNKSR1-201ENST00000361530 LNPKQ9C0E8 428 aa19.61■□□□□ 0.73
CNKSR1-201ENST00000361530 ATP7BP35670 1465 aa19.61■□□□□ 0.73
CNKSR1-201ENST00000361530 RIMS2Q9UQ26 1411 aa19.61■□□□□ 0.73
CNKSR1-201ENST00000361530 ELL2O00472 640 aaPredicted RBP19.6■□□□□ 0.73
CNKSR1-201ENST00000361530 IL13P35225 146 aa19.6■□□□□ 0.73
CNKSR1-201ENST00000361530 MAP2P11137 1827 aaKnown RBP19.6■□□□□ 0.73
CNKSR1-201ENST00000361530 NCKAP5LQ9HCH0 1330 aa19.6■□□□□ 0.73
CNKSR1-201ENST00000361530 DLC1Q96QB1 1528 aa19.6■□□□□ 0.73
CNKSR1-201ENST00000361530 BRPF1P55201 1214 aaPredicted RBP19.59■□□□□ 0.73
CNKSR1-201ENST00000361530 MLECQ14165 292 aa19.59■□□□□ 0.73
CNKSR1-201ENST00000361530 MRPL50Q8N5N7 158 aaKnown RBP19.59■□□□□ 0.73
CNKSR1-201ENST00000361530 ZBTB7BO15156 539 aaPredicted RBP19.59■□□□□ 0.73
CNKSR1-201ENST00000361530 PODXL2Q9NZ53 605 aa19.59■□□□□ 0.73
CNKSR1-201ENST00000361530 PPIP5K1Q6PFW1 1433 aa19.59■□□□□ 0.73
CNKSR1-201ENST00000361530 WASLO00401 505 aaPredicted RBP19.58■□□□□ 0.73
CNKSR1-201ENST00000361530 CPSF1Q10570 1443 aaKnown RBP19.58■□□□□ 0.72
CNKSR1-201ENST00000361530 CHD1LQ86WJ1 897 aa19.57■□□□□ 0.72
CNKSR1-201ENST00000361530 C1orf115Q9H7X2 142 aa19.57■□□□□ 0.72
CNKSR1-201ENST00000361530 TXNDC2Q86VQ3 553 aa19.57■□□□□ 0.72
CNKSR1-201ENST00000361530 ZNF428Q96B54 188 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms