RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 MIS18AQ9NYP9 233 aa24.47■■□□□ 1.51
CDC42BPB-201ENST00000361246 FKBP4Q02790 459 aaKnown RBP eCLIP24.47■■□□□ 1.51
CDC42BPB-201ENST00000361246 WWC2Q6AWC2 1192 aa24.47■■□□□ 1.51
CDC42BPB-201ENST00000361246 MPHOSPH8Q99549 860 aa24.47■■□□□ 1.51
CDC42BPB-201ENST00000361246 HOOK1Q9UJC3 728 aaKnown RBP24.47■■□□□ 1.51
CDC42BPB-201ENST00000361246 SKIDA1Q1XH10 827 aa24.46■■□□□ 1.51
CDC42BPB-201ENST00000361246 PDILTQ8N807 584 aa24.46■■□□□ 1.51
CDC42BPB-201ENST00000361246 HSP90AB4PQ58FF6 505 aa24.46■■□□□ 1.51
CDC42BPB-201ENST00000361246 ZHX3Q9H4I2 956 aa24.46■■□□□ 1.51
CDC42BPB-201ENST00000361246 SLC4A2P04920 1241 aa24.46■■□□□ 1.51
CDC42BPB-201ENST00000361246 IGF1RP08069 1367 aa24.46■■□□□ 1.51
CDC42BPB-201ENST00000361246 USHBP1Q8N6Y0 703 aa24.46■■□□□ 1.51
CDC42BPB-201ENST00000361246 ANKRD50Q9ULJ7 1429 aa24.46■■□□□ 1.51
CDC42BPB-201ENST00000361246 SPG7Q9UQ90 795 aa24.45■■□□□ 1.51
CDC42BPB-201ENST00000361246 HOMER1Q86YM7 354 aa24.45■■□□□ 1.5
CDC42BPB-201ENST00000361246 PTCD1O75127 700 aaKnown RBP24.45■■□□□ 1.5
CDC42BPB-201ENST00000361246 IPO7O95373 1038 aaKnown RBP24.45■■□□□ 1.5
CDC42BPB-201ENST00000361246 HDGFL1Q5TGJ6 251 aa24.45■■□□□ 1.5
CDC42BPB-201ENST00000361246 MPHOSPH10O00566 681 aaKnown RBP24.44■■□□□ 1.5
CDC42BPB-201ENST00000361246 CCDC158Q5M9N0 1113 aa24.44■■□□□ 1.5
CDC42BPB-201ENST00000361246 BTBD11A6QL63 1104 aa24.44■■□□□ 1.5
CDC42BPB-201ENST00000361246 CDK5RAP3Q96JB5 506 aa24.44■■□□□ 1.5
CDC42BPB-201ENST00000361246 EXOSC9Q06265 439 aaKnown RBP24.43■■□□□ 1.5
CDC42BPB-201ENST00000361246 NINLQ9Y2I6 1382 aa24.43■■□□□ 1.5
CDC42BPB-201ENST00000361246 SASS6Q6UVJ0 657 aa24.43■■□□□ 1.5
CDC42BPB-201ENST00000361246 NOB1Q9ULX3 412 aaKnown RBP24.43■■□□□ 1.5
CDC42BPB-201ENST00000361246 KIF7Q2M1P5 1343 aa24.43■■□□□ 1.5
CDC42BPB-201ENST00000361246 WWC3Q9ULE0 1092 aa24.43■■□□□ 1.5
CDC42BPB-201ENST00000361246 NUP133Q8WUM0 1156 aa24.43■■□□□ 1.5
CDC42BPB-201ENST00000361246 BRPF1P55201 1214 aaPredicted RBP24.42■■□□□ 1.5
CDC42BPB-201ENST00000361246 CLASRPQ8N2M8 674 aaKnown RBP24.42■■□□□ 1.5
CDC42BPB-201ENST00000361246 KRT18P05783 430 aaKnown RBP24.42■■□□□ 1.5
CDC42BPB-201ENST00000361246 TNNT3P45378 269 aaPredicted RBP24.42■■□□□ 1.5
CDC42BPB-201ENST00000361246 HSP90AB2PQ58FF8 381 aa24.41■■□□□ 1.5
CDC42BPB-201ENST00000361246 SLC3A2P08195 630 aaKnown RBP24.41■■□□□ 1.5
CDC42BPB-201ENST00000361246 TWISTNBQ3B726 338 aaPredicted RBP24.41■■□□□ 1.5
CDC42BPB-201ENST00000361246 TCP11L2Q8N4U5 519 aa24.41■■□□□ 1.5
CDC42BPB-201ENST00000361246 GNL3LQ9NVN8 582 aaKnown RBP24.41■■□□□ 1.5
CDC42BPB-201ENST00000361246 CNTLNQ9NXG0 1405 aa24.41■■□□□ 1.5
CDC42BPB-201ENST00000361246 CDCA7LQ96GN5 454 aa24.41■■□□□ 1.5
CDC42BPB-201ENST00000361246 TSHZ2Q9NRE2 1034 aa24.4■■□□□ 1.5
CDC42BPB-201ENST00000361246 CEBPAP49715 358 aaPredicted RBP24.4■■□□□ 1.5
CDC42BPB-201ENST00000361246 SART3Q15020 963 aaKnown RBP24.4■■□□□ 1.5
CDC42BPB-201ENST00000361246 XBP1P17861 261 aa24.4■■□□□ 1.5
CDC42BPB-201ENST00000361246 SYNJ2O15056 1496 aa24.39■■□□□ 1.5
CDC42BPB-201ENST00000361246 CCDC70Q6NSX1 233 aa24.39■■□□□ 1.5
CDC42BPB-201ENST00000361246 TTLL12Q14166 644 aaPredicted RBP24.39■■□□□ 1.49
CDC42BPB-201ENST00000361246 CCDC57Q2TAC2 916 aa24.39■■□□□ 1.49
CDC42BPB-201ENST00000361246 FGD6Q6ZV73 1430 aa24.39■■□□□ 1.49
CDC42BPB-201ENST00000361246 WAPLQ7Z5K2 1190 aa24.38■■□□□ 1.49
CDC42BPB-201ENST00000361246 MPRIPQ6WCQ1 1025 aa24.37■■□□□ 1.49
CDC42BPB-201ENST00000361246 RTEL1-TNFRSF6BF6WH68 1400 aa24.37■■□□□ 1.49
CDC42BPB-201ENST00000361246 OFD1O75665 1012 aa24.36■■□□□ 1.49
CDC42BPB-201ENST00000361246 MATR3P43243 847 aaKnown RBP eCLIP24.36■■□□□ 1.49
CDC42BPB-201ENST00000361246 GRM1Q13255 1194 aa24.36■■□□□ 1.49
CDC42BPB-201ENST00000361246 NGLY1Q96IV0 654 aa24.36■■□□□ 1.49
CDC42BPB-201ENST00000361246 RRBP1Q9P2E9 1410 aaKnown RBP24.36■■□□□ 1.49
CDC42BPB-201ENST00000361246 CUX1P39880 1505 aa24.36■■□□□ 1.49
CDC42BPB-201ENST00000361246 CCDC73Q6ZRK6 1079 aa24.35■■□□□ 1.49
CDC42BPB-201ENST00000361246 FYCO1Q9BQS8 1478 aa24.35■■□□□ 1.49
CDC42BPB-201ENST00000361246 RAI14Q9P0K7 980 aa24.35■■□□□ 1.49
CDC42BPB-201ENST00000361246 NCOA2Q15596 1464 aa24.35■■□□□ 1.49
CDC42BPB-201ENST00000361246 FMNL2Q96PY5 1086 aa24.34■■□□□ 1.49
CDC42BPB-201ENST00000361246 USP5P45974 858 aa24.34■■□□□ 1.49
CDC42BPB-201ENST00000361246 ZBED9Q6R2W3 1325 aa24.34■■□□□ 1.49
CDC42BPB-201ENST00000361246 GRIN2BQ13224 1484 aa24.33■■□□□ 1.48
CDC42BPB-201ENST00000361246 BCAR3O75815 825 aa24.32■■□□□ 1.48
CDC42BPB-201ENST00000361246 ECM2O94769 699 aaPredicted RBP24.32■■□□□ 1.48
CDC42BPB-201ENST00000361246 OLFM4Q6UX06 510 aa24.32■■□□□ 1.48
CDC42BPB-201ENST00000361246 ZPR1O75312 459 aa24.32■■□□□ 1.48
CDC42BPB-201ENST00000361246 SNAPC4Q5SXM2 1469 aa24.31■■□□□ 1.48
CDC42BPB-201ENST00000361246 GNAI2P04899 355 aa24.31■■□□□ 1.48
CDC42BPB-201ENST00000361246 SLC4A8Q2Y0W8 1093 aa24.31■■□□□ 1.48
CDC42BPB-201ENST00000361246 ERBINQ96RT1 1412 aa24.31■■□□□ 1.48
CDC42BPB-201ENST00000361246 PPP2R1AP30153 589 aa24.31■■□□□ 1.48
CDC42BPB-201ENST00000361246 C22orf23Q9BZE7 217 aa24.31■■□□□ 1.48
CDC42BPB-201ENST00000361246 ABCF2Q9UG63 623 aa24.31■■□□□ 1.48
CDC42BPB-201ENST00000361246 CFTRP13569 1480 aa24.3■■□□□ 1.48
CDC42BPB-201ENST00000361246 CCDC69A6NI79 296 aa24.29■■□□□ 1.48
CDC42BPB-201ENST00000361246 PSMA5P28066 241 aa24.29■■□□□ 1.48
CDC42BPB-201ENST00000361246 WDR78Q5VTH9 848 aa24.29■■□□□ 1.48
CDC42BPB-201ENST00000361246 ANKIB1Q9P2G1 1089 aa24.29■■□□□ 1.48
CDC42BPB-201ENST00000361246 SDF4Q9BRK5 362 aa24.29■■□□□ 1.48
CDC42BPB-201ENST00000361246 CCDC7Q96M83 1385 aa24.29■■□□□ 1.48
CDC42BPB-201ENST00000361246 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.29■■□□□ 1.482e-6■■■■■ 31.4
CDC42BPB-201ENST00000361246 CC2D2AQ9P2K1 1620 aa24.29■■□□□ 1.48
CDC42BPB-201ENST00000361246 LRP2BPQ9P2M1 347 aa24.28■■□□□ 1.48
CDC42BPB-201ENST00000361246 GNAI3P08754 354 aa24.27■■□□□ 1.48
CDC42BPB-201ENST00000361246 CDC45O75419 566 aa24.27■■□□□ 1.48
CDC42BPB-201ENST00000361246 AACSQ86V21 672 aa24.27■■□□□ 1.48
CDC42BPB-201ENST00000361246 TDO2P48775 406 aa24.27■■□□□ 1.48
CDC42BPB-201ENST00000361246 DCTN1Q14203 1278 aa24.26■■□□□ 1.47
CDC42BPB-201ENST00000361246 TMOD3Q9NYL9 352 aa24.26■■□□□ 1.47
CDC42BPB-201ENST00000361246 SSBP05455 408 aaKnown RBP eCLIP24.25■■□□□ 1.47
CDC42BPB-201ENST00000361246 RNF214Q8ND24 703 aa24.25■■□□□ 1.47
CDC42BPB-201ENST00000361246 IDH1O75874 414 aaKnown RBP24.25■■□□□ 1.47
CDC42BPB-201ENST00000361246 FOXO3O43524 673 aa24.24■■□□□ 1.47
CDC42BPB-201ENST00000361246 ZNF76P36508 570 aa24.24■■□□□ 1.47
CDC42BPB-201ENST00000361246 LRRC9Q6ZRR7 1453 aa24.24■■□□□ 1.47
CDC42BPB-201ENST00000361246 MRC2Q9UBG0 1479 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms