RNA–Protein interactions for RNA: ENST00000360906.9

NLRC4-202, Transcript of NLR family CARD domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC4, Length 3,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-202ENST00000360906 AMER1Q5JTC6 1135 aaPredicted RBP8.73□□□□□ -1.01
NLRC4-202ENST00000360906 DIP2AQ14689 1571 aa8.73□□□□□ -1.01
NLRC4-202ENST00000360906 PLEKHG3A1L390 1219 aa8.73□□□□□ -1.01
NLRC4-202ENST00000360906 ZNF692Q9BU19 519 aaPredicted RBP8.73□□□□□ -1.01
NLRC4-202ENST00000360906 LAMC1P11047 1609 aa8.73□□□□□ -1.01
NLRC4-202ENST00000360906 KIAA1210Q9ULL0 1709 aa8.72□□□□□ -1.01
NLRC4-202ENST00000360906 U2SURPO15042 1029 aaKnown RBP8.72□□□□□ -1.01
NLRC4-202ENST00000360906 MTHFSP49914 203 aa8.72□□□□□ -1.01
NLRC4-202ENST00000360906 MYT1Q01538 1121 aa8.72□□□□□ -1.01
NLRC4-202ENST00000360906 ATP7BP35670 1465 aa8.72□□□□□ -1.01
NLRC4-202ENST00000360906 STRN4Q9NRL3 753 aa8.72□□□□□ -1.01
NLRC4-202ENST00000360906 MST1RQ04912 1400 aa8.71□□□□□ -1.01
NLRC4-202ENST00000360906 NPHP3Q7Z494 1330 aa8.71□□□□□ -1.01
NLRC4-202ENST00000360906 NKTRP30414 1462 aaKnown RBP8.71□□□□□ -1.01
NLRC4-202ENST00000360906 AMPHP49418 695 aa8.71□□□□□ -1.01
NLRC4-202ENST00000360906 CPS1P31327 1500 aa8.71□□□□□ -1.01
NLRC4-202ENST00000360906 NEUROD2Q15784 382 aa8.71□□□□□ -1.02
NLRC4-202ENST00000360906 ANKRD36BQ8N2N9 1353 aa8.71□□□□□ -1.02
NLRC4-202ENST00000360906 SBNO2Q9Y2G9 1366 aa8.71□□□□□ -1.02
NLRC4-202ENST00000360906 USHBP1Q8N6Y0 703 aa8.7□□□□□ -1.02
NLRC4-202ENST00000360906 CCDC9Q9Y3X0 531 aaKnown RBP8.7□□□□□ -1.02
NLRC4-202ENST00000360906 NALCNQ8IZF0 1738 aa8.7□□□□□ -1.02
NLRC4-202ENST00000360906 XRN1Q8IZH2 1706 aaKnown RBP8.7□□□□□ -1.02
NLRC4-202ENST00000360906 HSP90AB2PQ58FF8 381 aa8.7□□□□□ -1.02
NLRC4-202ENST00000360906 DLC1Q96QB1 1528 aa8.7□□□□□ -1.02
NLRC4-202ENST00000360906 GCP02774 474 aa8.7□□□□□ -1.02
NLRC4-202ENST00000360906 CCDC146Q8IYE0 955 aa8.7□□□□□ -1.02
NLRC4-202ENST00000360906 HMOX1P09601 288 aa8.69□□□□□ -1.02
NLRC4-202ENST00000360906 NLRP13Q86W25 1043 aa8.69□□□□□ -1.02
NLRC4-202ENST00000360906 A0A0G2JS52 829 aa8.69□□□□□ -1.02
NLRC4-202ENST00000360906 CSB-PGBD3P0DP91 1061 aa8.69□□□□□ -1.02
NLRC4-202ENST00000360906 PPP2R1AP30153 589 aa8.69□□□□□ -1.02
NLRC4-202ENST00000360906 C8orf37Q96NL8 207 aa8.69□□□□□ -1.02
NLRC4-202ENST00000360906 SRCAPQ6ZRS2 3230 aa8.69□□□□□ -1.02
NLRC4-202ENST00000360906 LTBP4Q8N2S1 1624 aa8.68□□□□□ -1.02
NLRC4-202ENST00000360906 PRDM11Q9NQV5 511 aa8.68□□□□□ -1.02
NLRC4-202ENST00000360906 LRRC59Q96AG4 307 aaKnown RBP8.68□□□□□ -1.02
NLRC4-202ENST00000360906 MEX3CQ5U5Q3 659 aaKnown RBP8.67□□□□□ -1.02
NLRC4-202ENST00000360906 USP6P35125 1406 aa8.67□□□□□ -1.02
NLRC4-202ENST00000360906 CD163L1Q9NR16 1453 aa8.67□□□□□ -1.02
NLRC4-202ENST00000360906 POLKQ9UBT6 870 aa8.67□□□□□ -1.02
NLRC4-202ENST00000360906 AXIN2Q9Y2T1 843 aa8.67□□□□□ -1.02
NLRC4-202ENST00000360906 U2AF1L5P0DN76 240 aaPredicted RBP8.67□□□□□ -1.02
NLRC4-202ENST00000360906 U2AF1Q01081 240 aaKnown RBP eCLIP8.67□□□□□ -1.02
NLRC4-202ENST00000360906 NGLY1Q96IV0 654 aa8.66□□□□□ -1.02
NLRC4-202ENST00000360906 RRP7AQ9Y3A4 280 aaKnown RBP8.66□□□□□ -1.02
NLRC4-202ENST00000360906 MAP3K19Q56UN5 1328 aa8.66□□□□□ -1.02
NLRC4-202ENST00000360906 SPATA31A3Q5VYP0 1347 aa8.66□□□□□ -1.02
NLRC4-202ENST00000360906 EVA1CP58658 441 aa8.66□□□□□ -1.02
NLRC4-202ENST00000360906 NLRP2Q9NX02 1062 aa8.65□□□□□ -1.02
NLRC4-202ENST00000360906 CPSF1Q10570 1443 aaKnown RBP8.65□□□□□ -1.03
NLRC4-202ENST00000360906 XIRP1Q702N8 1843 aaKnown RBP8.65□□□□□ -1.03
NLRC4-202ENST00000360906 USP32Q8NFA0 1604 aa8.64□□□□□ -1.03
NLRC4-202ENST00000360906 FAM83GA6ND36 823 aa8.64□□□□□ -1.03
NLRC4-202ENST00000360906 WDR43Q15061 677 aaKnown RBP eCLIP8.64□□□□□ -1.03
NLRC4-202ENST00000360906 PUS7Q96PZ0 661 aaKnown RBP8.64□□□□□ -1.03
NLRC4-202ENST00000360906 BTG4Q9NY30 223 aa8.64□□□□□ -1.03
NLRC4-202ENST00000360906 NWD1Q149M9 1564 aa8.64□□□□□ -1.03
NLRC4-202ENST00000360906 AEBP1Q8IUX7 1158 aa8.64□□□□□ -1.03
NLRC4-202ENST00000360906 ADAMTS8Q9UP79 889 aa8.64□□□□□ -1.03
NLRC4-202ENST00000360906 KIAA0232Q92628 1395 aa8.63□□□□□ -1.03
NLRC4-202ENST00000360906 MYBBP1AQ9BQG0 1328 aaKnown RBP8.63□□□□□ -1.03
NLRC4-202ENST00000360906 EDC4Q6P2E9 1401 aaKnown RBP8.63□□□□□ -1.03
NLRC4-202ENST00000360906 RALBP1Q15311 655 aa8.63□□□□□ -1.03
NLRC4-202ENST00000360906 POLR3AO14802 1390 aaPredicted RBP8.63□□□□□ -1.03
NLRC4-202ENST00000360906 SOS2Q07890 1332 aaPredicted RBP8.63□□□□□ -1.03
NLRC4-202ENST00000360906 ANKARQ7Z5J8 1434 aa8.63□□□□□ -1.03
NLRC4-202ENST00000360906 KAT6BQ8WYB5 2073 aa8.63□□□□□ -1.03
NLRC4-202ENST00000360906 KNDC1Q76NI1 1749 aa8.63□□□□□ -1.03
NLRC4-202ENST00000360906 HNRNPUQ00839 825 aaKnown RBP eCLIP8.62□□□□□ -1.03
NLRC4-202ENST00000360906 ILDR1Q86SU0 546 aaPredicted RBP8.62□□□□□ -1.03
NLRC4-202ENST00000360906 FAM182BQ5T319 152 aa8.62□□□□□ -1.03
NLRC4-202ENST00000360906 TOM1L2Q6ZVM7 507 aa8.62□□□□□ -1.03
NLRC4-202ENST00000360906 SULT6B1Q6IMI4 303 aa8.62□□□□□ -1.03
NLRC4-202ENST00000360906 CFAP53Q96M91 514 aa8.62□□□□□ -1.03
NLRC4-202ENST00000360906 TTC21AQ8NDW8 1320 aa8.62□□□□□ -1.03
NLRC4-202ENST00000360906 CDC42BPGQ6DT37 1551 aa8.61□□□□□ -1.03
NLRC4-202ENST00000360906 EP400Q96L91 3159 aa8.61□□□□□ -1.03
NLRC4-202ENST00000360906 DIAPH1O60610 1272 aaKnown RBP8.61□□□□□ -1.03
NLRC4-202ENST00000360906 FMN2Q9NZ56 1722 aa8.61□□□□□ -1.03
NLRC4-202ENST00000360906 MYOM1P52179 1685 aa8.61□□□□□ -1.03
NLRC4-202ENST00000360906 HOXC9P31274 260 aa8.61□□□□□ -1.03
NLRC4-202ENST00000360906 EIF4A2Q14240 407 aaKnown RBP8.61□□□□□ -1.03
NLRC4-202ENST00000360906 LARP1Q6PKG0 1096 aaKnown RBP8.61□□□□□ -1.03
NLRC4-202ENST00000360906 ANKRD24Q8TF21 1146 aa8.61□□□□□ -1.03
NLRC4-202ENST00000360906 ROBO1Q9Y6N7 1651 aa8.6□□□□□ -1.03
NLRC4-202ENST00000360906 NINLQ9Y2I6 1382 aa8.6□□□□□ -1.03
NLRC4-202ENST00000360906 NCOA3Q9Y6Q9 1424 aa8.6□□□□□ -1.03
NLRC4-202ENST00000360906 DCCP43146 1447 aa8.6□□□□□ -1.03
NLRC4-202ENST00000360906 NBPF6Q5VWK0 638 aa8.59□□□□□ -1.03
NLRC4-202ENST00000360906 ARHGEF25Q86VW2 580 aa8.59□□□□□ -1.03
NLRC4-202ENST00000360906 KCNH5Q8NCM2 988 aa8.59□□□□□ -1.03
NLRC4-202ENST00000360906 NBPF4Q96M43 638 aa8.59□□□□□ -1.03
NLRC4-202ENST00000360906 APAF1O14727 1248 aa8.59□□□□□ -1.03
NLRC4-202ENST00000360906 DDX54Q8TDD1 881 aaKnown RBP8.59□□□□□ -1.03
NLRC4-202ENST00000360906 EYA1Q99502 592 aa8.59□□□□□ -1.03
NLRC4-202ENST00000360906 LAS1LQ9Y4W2 734 aaKnown RBP8.59□□□□□ -1.03
NLRC4-202ENST00000360906 TNS3Q68CZ2 1445 aa8.59□□□□□ -1.04
NLRC4-202ENST00000360906 PRKAR2BP31323 418 aa8.58□□□□□ -1.04
NLRC4-202ENST00000360906 PARD3Q8TEW0 1356 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms