RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 CARD14Q9BXL6 1004 aa17.1■□□□□ 0.33
NIF3L1-201ENST00000359683 PER1O15534 1290 aaPredicted RBP17.08■□□□□ 0.32
NIF3L1-201ENST00000359683 AKAP12Q02952 1782 aa17.07■□□□□ 0.32
NIF3L1-201ENST00000359683 NPHP3Q7Z494 1330 aa17.07■□□□□ 0.32
NIF3L1-201ENST00000359683 KTN1Q86UP2 1357 aaKnown RBP17.07■□□□□ 0.32
NIF3L1-201ENST00000359683 PSME1Q06323 249 aa17.07■□□□□ 0.32
NIF3L1-201ENST00000359683 USP6P35125 1406 aa17.06■□□□□ 0.32
NIF3L1-201ENST00000359683 SSH2Q76I76 1423 aa17.06■□□□□ 0.32
NIF3L1-201ENST00000359683 KRT28Q7Z3Y7 464 aa17.06■□□□□ 0.32
NIF3L1-201ENST00000359683 SPATA31A6Q5VVP1 1343 aa17.06■□□□□ 0.32
NIF3L1-201ENST00000359683 BRD4O60885 1362 aaPredicted RBP17.05■□□□□ 0.32
NIF3L1-201ENST00000359683 DDX17Q92841 729 aaKnown RBP17.05■□□□□ 0.32
NIF3L1-201ENST00000359683 SOS2Q07890 1332 aaPredicted RBP17.04■□□□□ 0.32
NIF3L1-201ENST00000359683 MON2Q7Z3U7 1717 aa17.04■□□□□ 0.32
NIF3L1-201ENST00000359683 EDC4Q6P2E9 1401 aaKnown RBP17.04■□□□□ 0.32
NIF3L1-201ENST00000359683 TTC21BQ7Z4L5 1316 aa17.03■□□□□ 0.32
NIF3L1-201ENST00000359683 ADRA2BP18089 450 aa17.03■□□□□ 0.32
NIF3L1-201ENST00000359683 MEX3CQ5U5Q3 659 aaKnown RBP17.03■□□□□ 0.32
NIF3L1-201ENST00000359683 KNSTRNQ9Y448 316 aa17.03■□□□□ 0.32
NIF3L1-201ENST00000359683 NSD3Q9BZ95 1437 aa17.02■□□□□ 0.32
NIF3L1-201ENST00000359683 XPCQ01831 940 aaPredicted RBP17.02■□□□□ 0.31
NIF3L1-201ENST00000359683 PXDNQ92626 1479 aa17.02■□□□□ 0.31
NIF3L1-201ENST00000359683 SBNO1A3KN83 1393 aa17.01■□□□□ 0.31
NIF3L1-201ENST00000359683 TTC21AQ8NDW8 1320 aa17■□□□□ 0.31
NIF3L1-201ENST00000359683 AMER1Q5JTC6 1135 aaPredicted RBP17■□□□□ 0.31
NIF3L1-201ENST00000359683 NRKQ7Z2Y5 1582 aa17■□□□□ 0.31
NIF3L1-201ENST00000359683 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.99■□□□□ 0.31
NIF3L1-201ENST00000359683 CGNL1Q0VF96 1302 aa16.99■□□□□ 0.31
NIF3L1-201ENST00000359683 FYB1O15117 783 aa16.99■□□□□ 0.31
NIF3L1-201ENST00000359683 TRPM3Q9HCF6 1732 aaPredicted RBP16.99■□□□□ 0.31
NIF3L1-201ENST00000359683 NPC1L1Q9UHC9 1359 aa16.98■□□□□ 0.31
NIF3L1-201ENST00000359683 SPATA31A3Q5VYP0 1347 aa16.98■□□□□ 0.31
NIF3L1-201ENST00000359683 PAK3O75914 559 aaPredicted RBP16.98■□□□□ 0.31
NIF3L1-201ENST00000359683 CACNB1Q02641 598 aaPredicted RBP16.97■□□□□ 0.31
NIF3L1-201ENST00000359683 NME9Q86XW9 330 aa16.97■□□□□ 0.31
NIF3L1-201ENST00000359683 NUTM2BA6NNL0 878 aaPredicted RBP16.96■□□□□ 0.31
NIF3L1-201ENST00000359683 NUTM2EB1AL46 878 aaPredicted RBP16.96■□□□□ 0.31
NIF3L1-201ENST00000359683 NUTM2AQ8IVF1 878 aaPredicted RBP16.96■□□□□ 0.31
NIF3L1-201ENST00000359683 LRRC59Q96AG4 307 aaKnown RBP16.96■□□□□ 0.31
NIF3L1-201ENST00000359683 ZNF772Q68DY9 489 aaPredicted RBP16.96■□□□□ 0.3
NIF3L1-201ENST00000359683 ABTB2Q8N961 1025 aa16.96■□□□□ 0.3
NIF3L1-201ENST00000359683 USP31Q70CQ4 1352 aa16.95■□□□□ 0.3
NIF3L1-201ENST00000359683 TNS3Q68CZ2 1445 aa16.95■□□□□ 0.3
NIF3L1-201ENST00000359683 NSD2O96028 1365 aa16.94■□□□□ 0.3
NIF3L1-201ENST00000359683 GGNBP2Q9H3C7 697 aa16.94■□□□□ 0.3
NIF3L1-201ENST00000359683 ZRANB1Q9UGI0 708 aa16.94■□□□□ 0.3
NIF3L1-201ENST00000359683 ALS2Q96Q42 1657 aa16.94■□□□□ 0.3
NIF3L1-201ENST00000359683 PNPLA6Q8IY17 1366 aa16.94■□□□□ 0.3
NIF3L1-201ENST00000359683 PIK3C2AO00443 1686 aa16.93■□□□□ 0.3
NIF3L1-201ENST00000359683 NLRP6P59044 892 aa16.92■□□□□ 0.3
NIF3L1-201ENST00000359683 NLRP13Q86W25 1043 aa16.92■□□□□ 0.3
NIF3L1-201ENST00000359683 ARHGEF10O15013 1369 aa16.92■□□□□ 0.3
NIF3L1-201ENST00000359683 CC2D1BQ5T0F9 858 aaKnown RBP16.92■□□□□ 0.3
NIF3L1-201ENST00000359683 NUTM2GQ5VZR2 741 aa16.92■□□□□ 0.3
NIF3L1-201ENST00000359683 DIEXFQ68CQ4 756 aaKnown RBP16.92■□□□□ 0.3
NIF3L1-201ENST00000359683 LMOD2Q6P5Q4 547 aa16.92■□□□□ 0.3
NIF3L1-201ENST00000359683 KIF20BQ96Q89 1820 aa16.91■□□□□ 0.3
NIF3L1-201ENST00000359683 COG3Q96JB2 828 aa16.91■□□□□ 0.3
NIF3L1-201ENST00000359683 OVOS2A0A0J9YW53 1432 aa16.9■□□□□ 0.3
NIF3L1-201ENST00000359683 OVOS2Q6IE36 1432 aa16.9■□□□□ 0.3
NIF3L1-201ENST00000359683 AFF2P51816 1311 aa16.9■□□□□ 0.3
NIF3L1-201ENST00000359683 USP54Q70EL1 1684 aa16.89■□□□□ 0.29
NIF3L1-201ENST00000359683 USP19O94966 1318 aa16.89■□□□□ 0.29
NIF3L1-201ENST00000359683 MORC1Q86VD1 984 aa16.88■□□□□ 0.29
NIF3L1-201ENST00000359683 MARF1Q9Y4F3 1742 aaKnown RBP16.88■□□□□ 0.29
NIF3L1-201ENST00000359683 CDK12Q9NYV4 1490 aaPredicted RBP16.87■□□□□ 0.29
NIF3L1-201ENST00000359683 COL22A1Q8NFW1 1626 aaPredicted RBP16.87■□□□□ 0.29
NIF3L1-201ENST00000359683 ANKRD26Q9UPS8 1709 aa16.87■□□□□ 0.29
NIF3L1-201ENST00000359683 CNGB1Q14028 1251 aaPredicted RBP16.87■□□□□ 0.29
NIF3L1-201ENST00000359683 RALBP1Q15311 655 aa16.87■□□□□ 0.29
NIF3L1-201ENST00000359683 PRKRIP1Q9H875 184 aaPredicted RBP16.87■□□□□ 0.29
NIF3L1-201ENST00000359683 PARD3Q8TEW0 1356 aa16.86■□□□□ 0.29
NIF3L1-201ENST00000359683 C8orf37Q96NL8 207 aa16.86■□□□□ 0.29
NIF3L1-201ENST00000359683 ANP32CO43423 234 aa16.85■□□□□ 0.29
NIF3L1-201ENST00000359683 RXRBP28702 533 aa16.85■□□□□ 0.29
NIF3L1-201ENST00000359683 SLIT3O75094 1523 aa16.85■□□□□ 0.29
NIF3L1-201ENST00000359683 GCP02774 474 aa16.85■□□□□ 0.29
NIF3L1-201ENST00000359683 KCNH5Q8NCM2 988 aa16.85■□□□□ 0.29
NIF3L1-201ENST00000359683 CABLES1Q8TDN4 633 aa16.85■□□□□ 0.29
NIF3L1-201ENST00000359683 AATKQ6ZMQ8 1374 aa16.84■□□□□ 0.29
NIF3L1-201ENST00000359683 RGS12O14924 1447 aa16.83■□□□□ 0.28
NIF3L1-201ENST00000359683 ADAMTS2O95450 1211 aa16.82■□□□□ 0.28
NIF3L1-201ENST00000359683 FBLN1P23142 703 aa16.82■□□□□ 0.28
NIF3L1-201ENST00000359683 TNNT2P45379 298 aaPredicted RBP16.82■□□□□ 0.28
NIF3L1-201ENST00000359683 CRYBG1Q9Y4K1 1723 aa16.82■□□□□ 0.28
NIF3L1-201ENST00000359683 PLEKHG5O94827 1062 aa16.81■□□□□ 0.28
NIF3L1-201ENST00000359683 NFAT5O94916 1531 aa16.81■□□□□ 0.28
NIF3L1-201ENST00000359683 PPP2R1AP30153 589 aa16.81■□□□□ 0.28
NIF3L1-201ENST00000359683 UPF1Q92900 1129 aaKnown RBP eCLIP16.81■□□□□ 0.28
NIF3L1-201ENST00000359683 SOX12O15370 315 aa16.8■□□□□ 0.28
NIF3L1-201ENST00000359683 POLKQ9UBT6 870 aa16.8■□□□□ 0.28
NIF3L1-201ENST00000359683 PHRF1Q9P1Y6 1649 aaKnown RBP16.79■□□□□ 0.28
NIF3L1-201ENST00000359683 ARHGEF25Q86VW2 580 aa16.79■□□□□ 0.28
NIF3L1-201ENST00000359683 MYBBP1AQ9BQG0 1328 aaKnown RBP16.78■□□□□ 0.28
NIF3L1-201ENST00000359683 NGLY1Q96IV0 654 aa16.78■□□□□ 0.28
NIF3L1-201ENST00000359683 ABCA3Q99758 1704 aa16.78■□□□□ 0.28
NIF3L1-201ENST00000359683 CPDO75976 1380 aa16.78■□□□□ 0.28
NIF3L1-201ENST00000359683 MAP3K19Q56UN5 1328 aa16.78■□□□□ 0.28
NIF3L1-201ENST00000359683 HAP1P54257 671 aaPredicted RBP16.78■□□□□ 0.28
NIF3L1-201ENST00000359683 ZC3H6P61129 1189 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms