RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 SMYD5Q6GMV2 418 aa3.04□□□□□ -1.92
SMARCAD1-202ENST00000359052 CWC22Q9HCG8 908 aaKnown RBP3.04□□□□□ -1.92
SMARCAD1-202ENST00000359052 CUX1P39880 1505 aa3.04□□□□□ -1.92
SMARCAD1-202ENST00000359052 RSF1Q96T23 1441 aaPredicted RBP3.04□□□□□ -1.92
SMARCAD1-202ENST00000359052 NDUFV2P19404 249 aa3.03□□□□□ -1.92
SMARCAD1-202ENST00000359052 DPY19L2Q6NUT2 758 aa3.03□□□□□ -1.92
SMARCAD1-202ENST00000359052 PCDHGA10Q9Y5H3 936 aa3.03□□□□□ -1.92
SMARCAD1-202ENST00000359052 TBC1D9Q6ZT07 1266 aa3.03□□□□□ -1.92
SMARCAD1-202ENST00000359052 ATXN2LQ8WWM7 1075 aaKnown RBP3.03□□□□□ -1.92
SMARCAD1-202ENST00000359052 FAM212AQ96EL1 285 aa3.03□□□□□ -1.92
SMARCAD1-202ENST00000359052 ASB16Q96NS5 453 aa3.03□□□□□ -1.92
SMARCAD1-202ENST00000359052 COL9A1P20849 921 aa3.03□□□□□ -1.92
SMARCAD1-202ENST00000359052 ZC3H6P61129 1189 aaKnown RBP3.03□□□□□ -1.92
SMARCAD1-202ENST00000359052 CLDN10P78369 228 aa3.03□□□□□ -1.92
SMARCAD1-202ENST00000359052 GDPD2Q9HCC8 539 aa3.03□□□□□ -1.92
SMARCAD1-202ENST00000359052 GJA8P48165 433 aa3.03□□□□□ -1.92
SMARCAD1-202ENST00000359052 DPH6Q7L8W6 267 aa3.03□□□□□ -1.92
SMARCAD1-202ENST00000359052 RASGRP4Q8TDF6 673 aa3.03□□□□□ -1.92
SMARCAD1-202ENST00000359052 PCDHB15Q9Y5E8 787 aa3.03□□□□□ -1.92
SMARCAD1-202ENST00000359052 PLEKHD1A6NEE1 506 aa3.02□□□□□ -1.93
SMARCAD1-202ENST00000359052 FCHSD2O94868 740 aa3.02□□□□□ -1.93
SMARCAD1-202ENST00000359052 RACK1P63244 317 aaKnown RBP3.02□□□□□ -1.93
SMARCAD1-202ENST00000359052 GALEQ14376 348 aa3.02□□□□□ -1.93
SMARCAD1-202ENST00000359052 CRTC2Q53ET0 693 aaPredicted RBP3.02□□□□□ -1.93
SMARCAD1-202ENST00000359052 ANKRD24Q8TF21 1146 aa3.02□□□□□ -1.93
SMARCAD1-202ENST00000359052 LNPKQ9C0E8 428 aa3.02□□□□□ -1.93
SMARCAD1-202ENST00000359052 SMARCA5O60264 1052 aaPredicted RBP3.02□□□□□ -1.93
SMARCAD1-202ENST00000359052 PHF14O94880 888 aa3.02□□□□□ -1.93
SMARCAD1-202ENST00000359052 SCNN1AP37088 669 aa3.02□□□□□ -1.93
SMARCAD1-202ENST00000359052 RNF135Q8IUD6 432 aa3.02□□□□□ -1.93
SMARCAD1-202ENST00000359052 WEE1P30291 646 aa3.02□□□□□ -1.93
SMARCAD1-202ENST00000359052 VRTNQ9H8Y1 702 aa3.02□□□□□ -1.93
SMARCAD1-202ENST00000359052 ASTLQ6HA08 431 aaPredicted RBP3.02□□□□□ -1.93
SMARCAD1-202ENST00000359052 MCF2L2Q86YR7 1114 aa3.02□□□□□ -1.93
SMARCAD1-202ENST00000359052 CFAP99D6REC4 459 aa3.01□□□□□ -1.93
SMARCAD1-202ENST00000359052 ATP9BO43861 1147 aa3.01□□□□□ -1.93
SMARCAD1-202ENST00000359052 DCAF8L2P0C7V8 631 aa3.01□□□□□ -1.93
SMARCAD1-202ENST00000359052 C4orf46Q504U0 113 aa3.01□□□□□ -1.93
SMARCAD1-202ENST00000359052 ARID3AQ99856 593 aa3.01□□□□□ -1.93
SMARCAD1-202ENST00000359052 PPME1Q9Y570 386 aa3.01□□□□□ -1.93
SMARCAD1-202ENST00000359052 CCDC194A0A1B0GVG4 234 aa3.01□□□□□ -1.93
SMARCAD1-202ENST00000359052 FRMPD1Q5SYB0 1578 aa3.01□□□□□ -1.93
SMARCAD1-202ENST00000359052 TREHO43280 583 aa3.01□□□□□ -1.93
SMARCAD1-202ENST00000359052 C12orf49Q9H741 205 aa3.01□□□□□ -1.93
SMARCAD1-202ENST00000359052 ABCB7O75027 752 aa3□□□□□ -1.93
SMARCAD1-202ENST00000359052 FAM163BP0C2L3 166 aa3□□□□□ -1.93
SMARCAD1-202ENST00000359052 SRGNP10124 158 aa3□□□□□ -1.93
SMARCAD1-202ENST00000359052 CCDC27Q2M243 656 aa3□□□□□ -1.93
SMARCAD1-202ENST00000359052 TSR1Q2NL82 804 aaKnown RBP3□□□□□ -1.93
SMARCAD1-202ENST00000359052 PLEKHG4Q58EX7 1191 aa3□□□□□ -1.93
SMARCAD1-202ENST00000359052 CACTIN-AS1Q8N1I8 211 aa3□□□□□ -1.93
SMARCAD1-202ENST00000359052 SLC39A7Q92504 469 aa3□□□□□ -1.93
SMARCAD1-202ENST00000359052 PGAP2Q9UHJ9 254 aa3□□□□□ -1.93
SMARCAD1-202ENST00000359052 RAPGEF6Q8TEU7 1601 aa3□□□□□ -1.93
SMARCAD1-202ENST00000359052 USP31Q70CQ4 1352 aa3□□□□□ -1.93
SMARCAD1-202ENST00000359052 ESPNB1AK53 854 aa3□□□□□ -1.93
SMARCAD1-202ENST00000359052 KLF4O43474 513 aa3□□□□□ -1.93
SMARCAD1-202ENST00000359052 RAB11FIP3O75154 756 aa3□□□□□ -1.93
SMARCAD1-202ENST00000359052 CLK2P49760 499 aaKnown RBP3□□□□□ -1.93
SMARCAD1-202ENST00000359052 DAB2P98082 770 aa3□□□□□ -1.93
SMARCAD1-202ENST00000359052 ZNF512BQ96KM6 892 aaPredicted RBP3□□□□□ -1.93
SMARCAD1-202ENST00000359052 CUL7Q14999 1698 aa3□□□□□ -1.93
SMARCAD1-202ENST00000359052 KIAA0907Q7Z7F0 614 aaPredicted RBP3□□□□□ -1.93
SMARCAD1-202ENST00000359052 SVIPQ8NHG7 77 aa3□□□□□ -1.93
SMARCAD1-202ENST00000359052 ZNF700Q9H0M5 742 aa3□□□□□ -1.93
SMARCAD1-202ENST00000359052 CEP170Q5SW79 1584 aa3□□□□□ -1.93
SMARCAD1-202ENST00000359052 KIAA0556O60303 1618 aa3□□□□□ -1.93
SMARCAD1-202ENST00000359052 PIK3CDO00329 1044 aa3□□□□□ -1.93
SMARCAD1-202ENST00000359052 PLCD3Q8N3E9 789 aa3□□□□□ -1.93
SMARCAD1-202ENST00000359052 MKL1Q969V6 931 aa3□□□□□ -1.93
SMARCAD1-202ENST00000359052 EPAS1Q99814 870 aa3□□□□□ -1.93
SMARCAD1-202ENST00000359052 TYW1Q9NV66 732 aaKnown RBP3□□□□□ -1.93
SMARCAD1-202ENST00000359052 ARHGEF11O15085 1522 aa3□□□□□ -1.93
SMARCAD1-202ENST00000359052 ERICH3Q5RHP9 1530 aa3□□□□□ -1.93
SMARCAD1-202ENST00000359052 TNFRSF10BO14763 440 aa2.99□□□□□ -1.93
SMARCAD1-202ENST00000359052 ERMP1Q7Z2K6 904 aa2.99□□□□□ -1.93
SMARCAD1-202ENST00000359052 PURBQ96QR8 312 aaKnown RBP2.99□□□□□ -1.93
SMARCAD1-202ENST00000359052 KRTAP17-1Q9BYP8 105 aa2.99□□□□□ -1.93
SMARCAD1-202ENST00000359052 KANSL2Q9H9L4 492 aa2.99□□□□□ -1.93
SMARCAD1-202ENST00000359052 DDX41Q9UJV9 622 aaKnown RBP2.99□□□□□ -1.93
SMARCAD1-202ENST00000359052 FAN1Q9Y2M0 1017 aa2.99□□□□□ -1.93
SMARCAD1-202ENST00000359052 PLEKHG6Q3KR16 790 aa2.99□□□□□ -1.93
SMARCAD1-202ENST00000359052 FAM126AQ9BYI3 521 aaPredicted RBP2.99□□□□□ -1.93
SMARCAD1-202ENST00000359052 METTL5Q9NRN9 209 aaKnown RBP2.99□□□□□ -1.93
SMARCAD1-202ENST00000359052 NLRP2Q9NX02 1062 aa2.99□□□□□ -1.93
SMARCAD1-202ENST00000359052 TFIP11Q9UBB9 837 aaKnown RBP2.99□□□□□ -1.93
SMARCAD1-202ENST00000359052 FZD9O00144 591 aa2.98□□□□□ -1.93
SMARCAD1-202ENST00000359052 RASA3Q14644 834 aa2.98□□□□□ -1.93
SMARCAD1-202ENST00000359052 RIC3Q7Z5B4 369 aa2.98□□□□□ -1.93
SMARCAD1-202ENST00000359052 RELTQ969Z4 430 aa2.98□□□□□ -1.93
SMARCAD1-202ENST00000359052 CROCC2H7BZ55 1655 aa2.98□□□□□ -1.93
SMARCAD1-202ENST00000359052 HDGFL1Q5TGJ6 251 aa2.98□□□□□ -1.93
SMARCAD1-202ENST00000359052 DESI1Q6ICB0 168 aa2.98□□□□□ -1.93
SMARCAD1-202ENST00000359052 BEGAINQ9BUH8 593 aa2.98□□□□□ -1.93
SMARCAD1-202ENST00000359052 TGIF2Q9GZN2 237 aa2.98□□□□□ -1.93
SMARCAD1-202ENST00000359052 CNTN3Q9P232 1028 aa2.98□□□□□ -1.93
SMARCAD1-202ENST00000359052 CDK11AQ9UQ88 783 aaPredicted RBP2.98□□□□□ -1.93
SMARCAD1-202ENST00000359052 ZNF330Q9Y3S2 320 aaPredicted RBP2.98□□□□□ -1.93
SMARCAD1-202ENST00000359052 P4HBP07237 508 aaKnown RBP2.98□□□□□ -1.93
SMARCAD1-202ENST00000359052 RAVER1Q8IY67 606 aaKnown RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms