RNA–Protein interactions for RNA: ENST00000358779.9

CDK11A-204, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK11A, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-204ENST00000358779 PRAM1Q96QH2 718 aa22.75■■□□□ 1.23
CDK11A-204ENST00000358779 RWDD1Q9H446 243 aaPredicted RBP22.74■■□□□ 1.23
CDK11A-204ENST00000358779 ALKQ9UM73 1620 aa22.74■■□□□ 1.23
CDK11A-204ENST00000358779 TMPOP42166 694 aaKnown RBP22.74■■□□□ 1.23
CDK11A-204ENST00000358779 PDZRN3Q9UPQ7 1066 aa22.74■■□□□ 1.23
CDK11A-204ENST00000358779 FYB1O15117 783 aa22.73■■□□□ 1.23
CDK11A-204ENST00000358779 POGKQ9P215 609 aa22.73■■□□□ 1.23
CDK11A-204ENST00000358779 FTSJ3Q8IY81 847 aaKnown RBP22.72■■□□□ 1.23
CDK11A-204ENST00000358779 DZIP1LQ8IYY4 767 aaKnown RBP22.72■■□□□ 1.23
CDK11A-204ENST00000358779 TRIM35Q9UPQ4 493 aa22.72■■□□□ 1.23
CDK11A-204ENST00000358779 EXOSC9Q06265 439 aaKnown RBP22.71■■□□□ 1.23
CDK11A-204ENST00000358779 SMC4Q9NTJ3 1288 aa22.7■■□□□ 1.22
CDK11A-204ENST00000358779 ARHGEF40Q8TER5 1519 aa22.7■■□□□ 1.22
CDK11A-204ENST00000358779 GSE1Q14687 1217 aa22.69■■□□□ 1.22
CDK11A-204ENST00000358779 HDGFL2Q7Z4V5 671 aaPredicted RBP22.69■■□□□ 1.22
CDK11A-204ENST00000358779 IL16Q14005 1332 aa22.69■■□□□ 1.22
CDK11A-204ENST00000358779 CDC42BPGQ6DT37 1551 aa22.68■■□□□ 1.22
CDK11A-204ENST00000358779 FBXO31Q5XUX0 539 aaPredicted RBP22.67■■□□□ 1.22
CDK11A-204ENST00000358779 PNPLA6Q8IY17 1366 aa22.67■■□□□ 1.22
CDK11A-204ENST00000358779 DIAPH1O60610 1272 aaKnown RBP22.66■■□□□ 1.22
CDK11A-204ENST00000358779 TRIM27P14373 513 aa22.66■■□□□ 1.22
CDK11A-204ENST00000358779 BECN1Q14457 450 aa22.66■■□□□ 1.22
CDK11A-204ENST00000358779 SSH1Q8WYL5 1049 aa22.66■■□□□ 1.22
CDK11A-204ENST00000358779 CDK19Q9BWU1 502 aa22.66■■□□□ 1.22
CDK11A-204ENST00000358779 LRRC7Q96NW7 1537 aa22.65■■□□□ 1.22
CDK11A-204ENST00000358779 FRAT2O75474 233 aaPredicted RBP22.65■■□□□ 1.22
CDK11A-204ENST00000358779 UPF2Q9HAU5 1272 aaKnown RBP22.65■■□□□ 1.22
CDK11A-204ENST00000358779 RIPK4P57078 832 aa22.64■■□□□ 1.21
CDK11A-204ENST00000358779 DLC1Q96QB1 1528 aa22.63■■□□□ 1.21
CDK11A-204ENST00000358779 PNNQ9H307 717 aaKnown RBP22.63■■□□□ 1.21
CDK11A-204ENST00000358779 ATF7IPQ6VMQ6 1270 aa22.62■■□□□ 1.21
CDK11A-204ENST00000358779 CABP1Q9NZU7 370 aa22.62■■□□□ 1.21
CDK11A-204ENST00000358779 DDX19BQ9UMR2 479 aa22.62■■□□□ 1.21
CDK11A-204ENST00000358779 SETD1AO15047 1707 aaKnown RBP22.62■■□□□ 1.21
CDK11A-204ENST00000358779 TBC1D32Q96NH3 1257 aa22.62■■□□□ 1.21
CDK11A-204ENST00000358779 ITPRIPQ8IWB1 547 aa22.61■■□□□ 1.21
CDK11A-204ENST00000358779 STAG3Q9UJ98 1225 aa22.61■■□□□ 1.21
CDK11A-204ENST00000358779 ATP7BP35670 1465 aa22.61■■□□□ 1.21
CDK11A-204ENST00000358779 RIMBP3CA6NJZ7 1639 aa22.6■■□□□ 1.21
CDK11A-204ENST00000358779 RIMBP3BA6NNM3 1639 aa22.6■■□□□ 1.21
CDK11A-204ENST00000358779 RIMBP3Q9UFD9 1639 aa22.6■■□□□ 1.21
CDK11A-204ENST00000358779 HDAC1Q13547 482 aaPredicted RBP22.6■■□□□ 1.21
CDK11A-204ENST00000358779 NOB1Q9ULX3 412 aaKnown RBP22.6■■□□□ 1.21
CDK11A-204ENST00000358779 FAM135BQ49AJ0 1406 aa22.59■■□□□ 1.21
CDK11A-204ENST00000358779 IL27Q8NEV9 243 aa22.59■■□□□ 1.21
CDK11A-204ENST00000358779 KIF16BQ96L93 1317 aa22.58■■□□□ 1.21
CDK11A-204ENST00000358779 REREQ9P2R6 1566 aa22.58■■□□□ 1.21
CDK11A-204ENST00000358779 MAP2P11137 1827 aaKnown RBP22.57■■□□□ 1.2
CDK11A-204ENST00000358779 FCHSD2O94868 740 aa22.57■■□□□ 1.2
CDK11A-204ENST00000358779 A2ML1A8K2U0 1454 aa22.57■■□□□ 1.2
CDK11A-204ENST00000358779 TMEM57Q8N5G2 664 aa22.56■■□□□ 1.2
CDK11A-204ENST00000358779 SPATA31D1Q6ZQQ2 1576 aa22.56■■□□□ 1.2
CDK11A-204ENST00000358779 AGLP35573 1532 aa22.55■■□□□ 1.2
CDK11A-204ENST00000358779 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.55■■□□□ 1.2
CDK11A-204ENST00000358779 RSPH6AQ9H0K4 717 aa22.55■■□□□ 1.2
CDK11A-204ENST00000358779 IPO8O15397 1037 aaKnown RBP22.54■■□□□ 1.2
CDK11A-204ENST00000358779 PRKAR2BP31323 418 aa22.54■■□□□ 1.2
CDK11A-204ENST00000358779 ALDH1L2Q3SY69 923 aa22.54■■□□□ 1.2
CDK11A-204ENST00000358779 RIMS2Q9UQ26 1411 aa22.54■■□□□ 1.2
CDK11A-204ENST00000358779 SLKQ9H2G2 1235 aaPredicted RBP22.53■■□□□ 1.2
CDK11A-204ENST00000358779 POLKQ9UBT6 870 aa22.53■■□□□ 1.2
CDK11A-204ENST00000358779 WAPLQ7Z5K2 1190 aa22.52■■□□□ 1.2
CDK11A-204ENST00000358779 SMC5Q8IY18 1101 aa22.52■■□□□ 1.2
CDK11A-204ENST00000358779 ZBTB40Q9NUA8 1239 aa22.52■■□□□ 1.2
CDK11A-204ENST00000358779 DIP2BQ9P265 1576 aa22.52■■□□□ 1.2
CDK11A-204ENST00000358779 PPIP5K1Q6PFW1 1433 aa22.52■■□□□ 1.2
CDK11A-204ENST00000358779 TSPOAP1O95153 1857 aa22.52■■□□□ 1.2
CDK11A-204ENST00000358779 TBC1D2Q9BYX2 928 aa22.51■■□□□ 1.19
CDK11A-204ENST00000358779 NRXN3Q9Y4C0 1643 aa22.5■■□□□ 1.19
CDK11A-204ENST00000358779 ANTXR1Q9H6X2 564 aa22.5■■□□□ 1.19
CDK11A-204ENST00000358779 FBLN1P23142 703 aa22.5■■□□□ 1.19
CDK11A-204ENST00000358779 PPP6R1Q9UPN7 881 aa22.5■■□□□ 1.19
CDK11A-204ENST00000358779 EDC4Q6P2E9 1401 aaKnown RBP22.49■■□□□ 1.19
CDK11A-204ENST00000358779 NFE2L2Q16236 605 aa22.48■■□□□ 1.19
CDK11A-204ENST00000358779 CDK12Q9NYV4 1490 aaPredicted RBP22.48■■□□□ 1.19
CDK11A-204ENST00000358779 CPSF1Q10570 1443 aaKnown RBP22.48■■□□□ 1.19
CDK11A-204ENST00000358779 ZNF428Q96B54 188 aa22.48■■□□□ 1.19
CDK11A-204ENST00000358779 FAM69CQ0P6D2 419 aa22.47■■□□□ 1.19
CDK11A-204ENST00000358779 BRPF3Q9ULD4 1205 aa22.47■■□□□ 1.19
CDK11A-204ENST00000358779 HMOX1P09601 288 aa22.46■■□□□ 1.19
CDK11A-204ENST00000358779 MFAP1P55081 439 aaKnown RBP22.46■■□□□ 1.19
CDK11A-204ENST00000358779 BRPF1P55201 1214 aaPredicted RBP22.46■■□□□ 1.19
CDK11A-204ENST00000358779 C22orf23Q9BZE7 217 aa22.46■■□□□ 1.19
CDK11A-204ENST00000358779 MON2Q7Z3U7 1717 aa22.46■■□□□ 1.19
CDK11A-204ENST00000358779 PHACTR3Q96KR7 559 aa22.46■■□□□ 1.19
CDK11A-204ENST00000358779 DLG5Q8TDM6 1919 aa22.45■■□□□ 1.18
CDK11A-204ENST00000358779 EMILIN1Q9Y6C2 1016 aa22.45■■□□□ 1.18
CDK11A-204ENST00000358779 CYB5RLQ6IPT4 315 aa22.45■■□□□ 1.18
CDK11A-204ENST00000358779 KNDC1Q76NI1 1749 aa22.44■■□□□ 1.18
CDK11A-204ENST00000358779 CALD1Q05682 793 aaKnown RBP22.44■■□□□ 1.18
CDK11A-204ENST00000358779 PTCH1Q13635 1447 aa22.43■■□□□ 1.18
CDK11A-204ENST00000358779 WASLO00401 505 aaPredicted RBP22.43■■□□□ 1.18
CDK11A-204ENST00000358779 NUCB1Q02818 461 aa22.43■■□□□ 1.18
CDK11A-204ENST00000358779 IL13P35225 146 aa22.42■■□□□ 1.18
CDK11A-204ENST00000358779 NME9Q86XW9 330 aa22.42■■□□□ 1.18
CDK11A-204ENST00000358779 THUMPD2Q9BTF0 503 aaKnown RBP22.42■■□□□ 1.18
CDK11A-204ENST00000358779 RTN4Q9NQC3 1192 aaKnown RBP22.42■■□□□ 1.18
CDK11A-204ENST00000358779 AATKQ6ZMQ8 1374 aa22.42■■□□□ 1.18
CDK11A-204ENST00000358779 ITSN1Q15811 1721 aa22.42■■□□□ 1.18
CDK11A-204ENST00000358779 AKAP12Q02952 1782 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms