RNA–Protein interactions for RNA: ENST00000358597.7

CELF1-202, Transcript of CUGBP Elav-like family member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CELF1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-202ENST00000358597 PHF8Q9UPP1 1060 aa11.65□□□□□ -0.54
CELF1-202ENST00000358597 KTN1Q86UP2 1357 aaKnown RBP11.65□□□□□ -0.54
CELF1-202ENST00000358597 EDC4Q6P2E9 1401 aaKnown RBP11.65□□□□□ -0.54
CELF1-202ENST00000358597 PIP4K2BP78356 416 aa11.64□□□□□ -0.55
CELF1-202ENST00000358597 HDGFL2Q7Z4V5 671 aaPredicted RBP11.64□□□□□ -0.55
CELF1-202ENST00000358597 PIK3C2AO00443 1686 aa11.64□□□□□ -0.55
CELF1-202ENST00000358597 AMER1Q5JTC6 1135 aaPredicted RBP11.63□□□□□ -0.55
CELF1-202ENST00000358597 BRINP3Q76B58 766 aa11.63□□□□□ -0.55
CELF1-202ENST00000358597 MARF1Q9Y4F3 1742 aaKnown RBP11.63□□□□□ -0.55
CELF1-202ENST00000358597 USP54Q70EL1 1684 aa11.63□□□□□ -0.55
CELF1-202ENST00000358597 ZNF692Q9BU19 519 aaPredicted RBP11.63□□□□□ -0.55
CELF1-202ENST00000358597 ALS2Q96Q42 1657 aa11.62□□□□□ -0.55
CELF1-202ENST00000358597 PXDNQ92626 1479 aa11.62□□□□□ -0.55
CELF1-202ENST00000358597 NPC1L1Q9UHC9 1359 aa11.62□□□□□ -0.55
CELF1-202ENST00000358597 NGDNQ8NEJ9 315 aaKnown RBP11.62□□□□□ -0.55
CELF1-202ENST00000358597 KNSTRNQ9Y448 316 aa11.62□□□□□ -0.55
CELF1-202ENST00000358597 FOXO3O43524 673 aa11.61□□□□□ -0.55
CELF1-202ENST00000358597 CGNL1Q0VF96 1302 aa11.6□□□□□ -0.55
CELF1-202ENST00000358597 AHDC1Q5TGY3 1603 aaPredicted RBP11.6□□□□□ -0.55
CELF1-202ENST00000358597 BRD4O60885 1362 aaPredicted RBP11.6□□□□□ -0.55
CELF1-202ENST00000358597 ILDR1Q86SU0 546 aaPredicted RBP11.6□□□□□ -0.55
CELF1-202ENST00000358597 NSD2O96028 1365 aa11.59□□□□□ -0.55
CELF1-202ENST00000358597 NPHP3Q7Z494 1330 aa11.59□□□□□ -0.55
CELF1-202ENST00000358597 TTC21BQ7Z4L5 1316 aa11.59□□□□□ -0.55
CELF1-202ENST00000358597 PARD3Q8TEW0 1356 aa11.59□□□□□ -0.55
CELF1-202ENST00000358597 DDX17Q92841 729 aaKnown RBP11.59□□□□□ -0.55
CELF1-202ENST00000358597 PHLPP1O60346 1717 aa11.58□□□□□ -0.56
CELF1-202ENST00000358597 TTC21AQ8NDW8 1320 aa11.58□□□□□ -0.56
CELF1-202ENST00000358597 FYB1O15117 783 aa11.58□□□□□ -0.56
CELF1-202ENST00000358597 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.58□□□□□ -0.561e-6■■■■□ 22.6
CELF1-202ENST00000358597 OVOS2A0A0J9YW53 1432 aa11.58□□□□□ -0.56
CELF1-202ENST00000358597 OVOS2Q6IE36 1432 aa11.58□□□□□ -0.56
CELF1-202ENST00000358597 CRYBG1Q9Y4K1 1723 aa11.57□□□□□ -0.56
CELF1-202ENST00000358597 XPCQ01831 940 aaPredicted RBP11.57□□□□□ -0.56
CELF1-202ENST00000358597 PSME1Q06323 249 aa11.57□□□□□ -0.56
CELF1-202ENST00000358597 CC2D1BQ5T0F9 858 aaKnown RBP11.57□□□□□ -0.56
CELF1-202ENST00000358597 PRKRIP1Q9H875 184 aaPredicted RBP11.57□□□□□ -0.56
CELF1-202ENST00000358597 NME9Q86XW9 330 aa11.57□□□□□ -0.56
CELF1-202ENST00000358597 COL16A1Q07092 1604 aaPredicted RBP11.57□□□□□ -0.56
CELF1-202ENST00000358597 SOS2Q07890 1332 aaPredicted RBP11.56□□□□□ -0.56
CELF1-202ENST00000358597 SBNO1A3KN83 1393 aa11.56□□□□□ -0.56
CELF1-202ENST00000358597 MAP2P11137 1827 aaKnown RBP11.56□□□□□ -0.56
CELF1-202ENST00000358597 KRT28Q7Z3Y7 464 aa11.56□□□□□ -0.56
CELF1-202ENST00000358597 GGNBP2Q9H3C7 697 aa11.56□□□□□ -0.56
CELF1-202ENST00000358597 USP31Q70CQ4 1352 aa11.56□□□□□ -0.56
CELF1-202ENST00000358597 TNS3Q68CZ2 1445 aa11.55□□□□□ -0.56
CELF1-202ENST00000358597 ANP32CO43423 234 aa11.55□□□□□ -0.56
CELF1-202ENST00000358597 ABCA3Q99758 1704 aa11.55□□□□□ -0.56
CELF1-202ENST00000358597 MED1Q15648 1581 aaPredicted RBP11.55□□□□□ -0.56
CELF1-202ENST00000358597 CNGB1Q14028 1251 aaPredicted RBP11.54□□□□□ -0.56
CELF1-202ENST00000358597 ZRANB1Q9UGI0 708 aa11.54□□□□□ -0.56
CELF1-202ENST00000358597 PHRF1Q9P1Y6 1649 aaKnown RBP11.54□□□□□ -0.56
CELF1-202ENST00000358597 PAK3O75914 559 aaPredicted RBP11.54□□□□□ -0.56
CELF1-202ENST00000358597 HSPA1LP34931 641 aa11.54□□□□□ -0.56
CELF1-202ENST00000358597 SLIT3O75094 1523 aa11.53□□□□□ -0.56
CELF1-202ENST00000358597 RALBP1Q15311 655 aa11.53□□□□□ -0.56
CELF1-202ENST00000358597 SPATA31A3Q5VYP0 1347 aa11.53□□□□□ -0.56
CELF1-202ENST00000358597 ABTB2Q8N961 1025 aa11.53□□□□□ -0.56
CELF1-202ENST00000358597 LTN1O94822 1766 aa11.52□□□□□ -0.57
CELF1-202ENST00000358597 COL22A1Q8NFW1 1626 aaPredicted RBP11.52□□□□□ -0.57
CELF1-202ENST00000358597 NFAT5O94916 1531 aa11.52□□□□□ -0.57
CELF1-202ENST00000358597 COG3Q96JB2 828 aa11.51□□□□□ -0.57
CELF1-202ENST00000358597 ARHGEF10O15013 1369 aa11.51□□□□□ -0.57
CELF1-202ENST00000358597 NLRP6P59044 892 aa11.51□□□□□ -0.57
CELF1-202ENST00000358597 MORC1Q86VD1 984 aa11.51□□□□□ -0.57
CELF1-202ENST00000358597 USP19O94966 1318 aa11.51□□□□□ -0.57
CELF1-202ENST00000358597 MYBBP1AQ9BQG0 1328 aaKnown RBP11.51□□□□□ -0.57
CELF1-202ENST00000358597 NUTM2GQ5VZR2 741 aa11.5□□□□□ -0.57
CELF1-202ENST00000358597 SHPRHQ149N8 1683 aa11.5□□□□□ -0.57
CELF1-202ENST00000358597 PEAK1Q9H792 1746 aa11.5□□□□□ -0.57
CELF1-202ENST00000358597 AATKQ6ZMQ8 1374 aa11.49□□□□□ -0.57
CELF1-202ENST00000358597 SMG6Q86US8 1419 aaKnown RBP11.49□□□□□ -0.57
CELF1-202ENST00000358597 PPP2R1AP30153 589 aa11.49□□□□□ -0.57
CELF1-202ENST00000358597 TNNT2P45379 298 aaPredicted RBP11.48□□□□□ -0.57
CELF1-202ENST00000358597 NLRP13Q86W25 1043 aa11.48□□□□□ -0.57
CELF1-202ENST00000358597 FBLN1P23142 703 aa11.48□□□□□ -0.57
CELF1-202ENST00000358597 LMOD2Q6P5Q4 547 aa11.48□□□□□ -0.57
CELF1-202ENST00000358597 JCADQ9P266 1359 aa11.48□□□□□ -0.57
CELF1-202ENST00000358597 LRRC59Q96AG4 307 aaKnown RBP11.47□□□□□ -0.57
CELF1-202ENST00000358597 PNPLA6Q8IY17 1366 aa11.47□□□□□ -0.57
CELF1-202ENST00000358597 CDK12Q9NYV4 1490 aaPredicted RBP11.46□□□□□ -0.57
CELF1-202ENST00000358597 CCDC184Q52MB2 194 aa11.46□□□□□ -0.57
CELF1-202ENST00000358597 COL3A1P02461 1466 aaPredicted RBP11.46□□□□□ -0.58
CELF1-202ENST00000358597 CCER2I3L3R5 266 aa11.45□□□□□ -0.58
CELF1-202ENST00000358597 POLKQ9UBT6 870 aa11.45□□□□□ -0.58
CELF1-202ENST00000358597 COL18A1P39060 1754 aa11.45□□□□□ -0.58
CELF1-202ENST00000358597 RGPD5Q99666 1765 aa11.45□□□□□ -0.58
CELF1-202ENST00000358597 SOX12O15370 315 aa11.45□□□□□ -0.58
CELF1-202ENST00000358597 GCP02774 474 aa11.45□□□□□ -0.58
CELF1-202ENST00000358597 RRS1Q15050 365 aaKnown RBP11.45□□□□□ -0.58
CELF1-202ENST00000358597 MAP3K19Q56UN5 1328 aa11.44□□□□□ -0.58
CELF1-202ENST00000358597 MTHFSP49914 203 aa11.44□□□□□ -0.58
CELF1-202ENST00000358597 KCNH5Q8NCM2 988 aa11.44□□□□□ -0.58
CELF1-202ENST00000358597 CABLES1Q8TDN4 633 aa11.44□□□□□ -0.58
CELF1-202ENST00000358597 EMILIN1Q9Y6C2 1016 aa11.44□□□□□ -0.58
CELF1-202ENST00000358597 CPDO75976 1380 aa11.43□□□□□ -0.58
CELF1-202ENST00000358597 INSRP06213 1382 aa11.43□□□□□ -0.58
CELF1-202ENST00000358597 KIF24Q5T7B8 1368 aa11.43□□□□□ -0.58
CELF1-202ENST00000358597 ABCC6O95255 1503 aa11.43□□□□□ -0.58
CELF1-202ENST00000358597 LMO7Q8WWI1 1683 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms