RNA–Protein interactions for RNA: ENST00000358438.6

POLR2J2-202, Transcript of RNA polymerase II subunit J2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J2, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2-202ENST00000358438 CHD2O14647 1828 aaKnown RBP29.39■■■□□ 2.3
POLR2J2-202ENST00000358438 KCNA6P17658 529 aa29.39■■■□□ 2.3
POLR2J2-202ENST00000358438 ZBTB47Q9UFB7 747 aaPredicted RBP29.39■■■□□ 2.3
POLR2J2-202ENST00000358438 ITSN1Q15811 1721 aa29.39■■■□□ 2.3
POLR2J2-202ENST00000358438 MON2Q7Z3U7 1717 aa29.38■■■□□ 2.29
POLR2J2-202ENST00000358438 AKAP12Q02952 1782 aa29.38■■■□□ 2.29
POLR2J2-202ENST00000358438 EDC4Q6P2E9 1401 aaKnown RBP29.38■■■□□ 2.29
POLR2J2-202ENST00000358438 MTHFSP49914 203 aa29.37■■■□□ 2.29
POLR2J2-202ENST00000358438 SHPRHQ149N8 1683 aa29.36■■■□□ 2.29
POLR2J2-202ENST00000358438 NPHP4O75161 1426 aaPredicted RBP29.35■■■□□ 2.29
POLR2J2-202ENST00000358438 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.34■■■□□ 2.29
POLR2J2-202ENST00000358438 SALL2Q9Y467 1007 aaPredicted RBP29.33■■■□□ 2.29
POLR2J2-202ENST00000358438 NUDCQ9Y266 331 aa29.33■■■□□ 2.29
POLR2J2-202ENST00000358438 ANO8Q9HCE9 1232 aaPredicted RBP29.32■■■□□ 2.28
POLR2J2-202ENST00000358438 CFAP53Q96M91 514 aa29.32■■■□□ 2.28
POLR2J2-202ENST00000358438 ZNF692Q9BU19 519 aaPredicted RBP29.31■■■□□ 2.28
POLR2J2-202ENST00000358438 USP35Q9P2H5 1018 aa29.31■■■□□ 2.28
POLR2J2-202ENST00000358438 NUTM2FA1L443 756 aa29.3■■■□□ 2.28
POLR2J2-202ENST00000358438 PLEKHG3A1L390 1219 aa29.29■■■□□ 2.28
POLR2J2-202ENST00000358438 PDE3BQ13370 1112 aa29.29■■■□□ 2.28
POLR2J2-202ENST00000358438 NKTRP30414 1462 aaKnown RBP29.28■■■□□ 2.28
POLR2J2-202ENST00000358438 NRKQ7Z2Y5 1582 aa29.25■■■□□ 2.27
POLR2J2-202ENST00000358438 ACEP12821 1306 aa29.25■■■□□ 2.27
POLR2J2-202ENST00000358438 CCDC136Q96JN2 1154 aa29.25■■■□□ 2.27
POLR2J2-202ENST00000358438 RGPD8O14715 1765 aaPredicted RBP29.25■■■□□ 2.27
POLR2J2-202ENST00000358438 CCDC146Q8IYE0 955 aa29.24■■■□□ 2.27
POLR2J2-202ENST00000358438 NALCNQ8IZF0 1738 aa29.23■■■□□ 2.27
POLR2J2-202ENST00000358438 NME9Q86XW9 330 aa29.23■■■□□ 2.27
POLR2J2-202ENST00000358438 FMN2Q9NZ56 1722 aa29.23■■■□□ 2.27
POLR2J2-202ENST00000358438 ANKARQ7Z5J8 1434 aa29.21■■■□□ 2.27
POLR2J2-202ENST00000358438 USP6P35125 1406 aa29.2■■■□□ 2.27
POLR2J2-202ENST00000358438 COL3A1P02461 1466 aaPredicted RBP29.2■■■□□ 2.27
POLR2J2-202ENST00000358438 STRCQ7RTU9 1775 aa29.2■■■□□ 2.26
POLR2J2-202ENST00000358438 NWD1Q149M9 1564 aa29.17■■■□□ 2.26
POLR2J2-202ENST00000358438 APAF1O14727 1248 aa29.17■■■□□ 2.26
POLR2J2-202ENST00000358438 MAP2P11137 1827 aaKnown RBP29.17■■■□□ 2.26
POLR2J2-202ENST00000358438 CDCA7LQ96GN5 454 aa29.16■■■□□ 2.26
POLR2J2-202ENST00000358438 COG3Q96JB2 828 aa29.16■■■□□ 2.26
POLR2J2-202ENST00000358438 ZRANB1Q9UGI0 708 aa29.16■■■□□ 2.26
POLR2J2-202ENST00000358438 TTC21BQ7Z4L5 1316 aa29.16■■■□□ 2.26
POLR2J2-202ENST00000358438 PNPLA6Q8IY17 1366 aa29.16■■■□□ 2.26
POLR2J2-202ENST00000358438 ZNF521Q96K83 1311 aa29.16■■■□□ 2.26
POLR2J2-202ENST00000358438 PMFBP1Q8TBY8 1022 aa29.14■■■□□ 2.26
POLR2J2-202ENST00000358438 SSH2Q76I76 1423 aa29.13■■■□□ 2.25
POLR2J2-202ENST00000358438 ADGRL3Q9HAR2 1447 aa29.13■■■□□ 2.25
POLR2J2-202ENST00000358438 POLKQ9UBT6 870 aa29.13■■■□□ 2.25
POLR2J2-202ENST00000358438 AATKQ6ZMQ8 1374 aa29.13■■■□□ 2.25
POLR2J2-202ENST00000358438 NGEFQ8N5V2 710 aa29.13■■■□□ 2.25
POLR2J2-202ENST00000358438 RUNDC1Q96C34 613 aa29.12■■■□□ 2.25
POLR2J2-202ENST00000358438 RBM33Q96EV2 1170 aaKnown RBP29.12■■■□□ 2.25
POLR2J2-202ENST00000358438 FBLN1P23142 703 aa29.11■■■□□ 2.25
POLR2J2-202ENST00000358438 U2AF1L5P0DN76 240 aaPredicted RBP29.11■■■□□ 2.25
POLR2J2-202ENST00000358438 U2AF1Q01081 240 aaKnown RBP eCLIP29.11■■■□□ 2.25
POLR2J2-202ENST00000358438 NGDNQ8NEJ9 315 aaKnown RBP29.11■■■□□ 2.25
POLR2J2-202ENST00000358438 IQSEC2Q5JU85 1478 aa29.09■■■□□ 2.25
POLR2J2-202ENST00000358438 OVOS2A0A0J9YW53 1432 aa29.08■■■□□ 2.25
POLR2J2-202ENST00000358438 OVOS2Q6IE36 1432 aa29.08■■■□□ 2.25
POLR2J2-202ENST00000358438 TCERG1O14776 1098 aaKnown RBP29.08■■■□□ 2.25
POLR2J2-202ENST00000358438 PPM1GO15355 546 aaPredicted RBP29.08■■■□□ 2.25
POLR2J2-202ENST00000358438 DIAPH1O60610 1272 aaKnown RBP29.08■■■□□ 2.25
POLR2J2-202ENST00000358438 TTC21AQ8NDW8 1320 aa29.07■■■□□ 2.24
POLR2J2-202ENST00000358438 GOLGA2Q08379 1002 aa29.06■■■□□ 2.24
POLR2J2-202ENST00000358438 IL27Q8NEV9 243 aa29.06■■■□□ 2.24
POLR2J2-202ENST00000358438 U2SURPO15042 1029 aaKnown RBP29.06■■■□□ 2.24
POLR2J2-202ENST00000358438 CDK12Q9NYV4 1490 aaPredicted RBP29.05■■■□□ 2.24
POLR2J2-202ENST00000358438 EMILIN1Q9Y6C2 1016 aa29.05■■■□□ 2.24
POLR2J2-202ENST00000358438 TCP11L2Q8N4U5 519 aa29.03■■■□□ 2.24
POLR2J2-202ENST00000358438 C14orf37Q86TY3 774 aa29.02■■■□□ 2.24
POLR2J2-202ENST00000358438 MS4A1P11836 297 aa29.01■■■□□ 2.24
POLR2J2-202ENST00000358438 RCAN3Q9UKA8 241 aa29.01■■■□□ 2.23
POLR2J2-202ENST00000358438 RRS1Q15050 365 aaKnown RBP29■■■□□ 2.23
POLR2J2-202ENST00000358438 PIK3C2AO00443 1686 aa28.99■■■□□ 2.23
POLR2J2-202ENST00000358438 DUSP27Q5VZP5 1158 aa28.99■■■□□ 2.23
POLR2J2-202ENST00000358438 PROSER2Q86WR7 435 aaPredicted RBP28.99■■■□□ 2.23
POLR2J2-202ENST00000358438 USP31Q70CQ4 1352 aa28.99■■■□□ 2.23
POLR2J2-202ENST00000358438 SLFN5Q08AF3 891 aa28.98■■■□□ 2.23
POLR2J2-202ENST00000358438 PHF8Q9UPP1 1060 aa28.98■■■□□ 2.23
POLR2J2-202ENST00000358438 WWC1Q8IX03 1113 aa28.98■■■□□ 2.23
POLR2J2-202ENST00000358438 PLEKHF1Q96S99 279 aa28.98■■■□□ 2.23
POLR2J2-202ENST00000358438 DMRT2Q9Y5R5 561 aa28.97■■■□□ 2.23
POLR2J2-202ENST00000358438 NEFMP07197 916 aa28.97■■■□□ 2.23
POLR2J2-202ENST00000358438 RRP7AQ9Y3A4 280 aaKnown RBP28.97■■■□□ 2.23
POLR2J2-202ENST00000358438 NEUROD2Q15784 382 aa28.95■■■□□ 2.23
POLR2J2-202ENST00000358438 NCBP3Q53F19 620 aaKnown RBP28.95■■■□□ 2.23
POLR2J2-202ENST00000358438 PHF23Q9BUL5 403 aaPredicted RBP28.95■■■□□ 2.23
POLR2J2-202ENST00000358438 TRMT2AQ8IZ69 625 aaKnown RBP28.95■■■□□ 2.22
POLR2J2-202ENST00000358438 STRCP1A6NGW2 1772 aa28.95■■■□□ 2.22
POLR2J2-202ENST00000358438 ZNF335Q9H4Z2 1342 aaPredicted RBP28.94■■■□□ 2.22
POLR2J2-202ENST00000358438 CCDC27Q2M243 656 aa28.93■■■□□ 2.22
POLR2J2-202ENST00000358438 E9PSI1 815 aa28.93■■■□□ 2.22
POLR2J2-202ENST00000358438 PNNQ9H307 717 aaKnown RBP28.93■■■□□ 2.22
POLR2J2-202ENST00000358438 SPINK5Q9NQ38 1064 aaPredicted RBP28.93■■■□□ 2.22
POLR2J2-202ENST00000358438 IL13P35225 146 aa28.92■■■□□ 2.22
POLR2J2-202ENST00000358438 UBE2Q2Q8WVN8 375 aa28.92■■■□□ 2.22
POLR2J2-202ENST00000358438 LRRC7Q96NW7 1537 aa28.92■■■□□ 2.22
POLR2J2-202ENST00000358438 FCHSD2O94868 740 aa28.92■■■□□ 2.22
POLR2J2-202ENST00000358438 ESCO1Q5FWF5 840 aa28.92■■■□□ 2.22
POLR2J2-202ENST00000358438 MAPK8IP3Q9UPT6 1336 aa28.91■■■□□ 2.22
POLR2J2-202ENST00000358438 USP54Q70EL1 1684 aa28.91■■■□□ 2.22
POLR2J2-202ENST00000358438 PEAK1Q9H792 1746 aa28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms