RNA–Protein interactions for RNA: ENST00000358309.3

CX3CR1-201, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

TSL 2 BASIC

Gene CX3CR1, Length 3,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-201ENST00000358309 CLTCL1P53675 1640 aa8.07□□□□□ -1.12
CX3CR1-201ENST00000358309 FOXD4L1Q9NU39 408 aa8.06□□□□□ -1.12
CX3CR1-201ENST00000358309 YTHDC2Q9H6S0 1430 aaKnown RBP8.06□□□□□ -1.12
CX3CR1-201ENST00000358309 PTCD1O75127 700 aaKnown RBP8.06□□□□□ -1.12
CX3CR1-201ENST00000358309 TSHZ3Q63HK5 1081 aa8.06□□□□□ -1.12
CX3CR1-201ENST00000358309 RTF1Q92541 710 aaKnown RBP8.06□□□□□ -1.12
CX3CR1-201ENST00000358309 PHF8Q9UPP1 1060 aa8.06□□□□□ -1.12
CX3CR1-201ENST00000358309 TMPOP42166 694 aaKnown RBP8.05□□□□□ -1.12
CX3CR1-201ENST00000358309 NOB1Q9ULX3 412 aaKnown RBP8.05□□□□□ -1.12
CX3CR1-201ENST00000358309 PPIP5K1Q6PFW1 1433 aa8.05□□□□□ -1.12
CX3CR1-201ENST00000358309 DUSP27Q5VZP5 1158 aa8.05□□□□□ -1.12
CX3CR1-201ENST00000358309 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.05□□□□□ -1.12
CX3CR1-201ENST00000358309 RUNDC1Q96C34 613 aa8.05□□□□□ -1.12
CX3CR1-201ENST00000358309 CEP152O94986 1710 aa8.05□□□□□ -1.12
CX3CR1-201ENST00000358309 PRAMEF22A3QJZ6 481 aa8.04□□□□□ -1.12
CX3CR1-201ENST00000358309 KCNQ3O43525 872 aa8.04□□□□□ -1.12
CX3CR1-201ENST00000358309 MYL6BP14649 208 aa8.04□□□□□ -1.12
CX3CR1-201ENST00000358309 EIF4A2Q14240 407 aaKnown RBP8.04□□□□□ -1.12
CX3CR1-201ENST00000358309 SSH1Q8WYL5 1049 aa8.04□□□□□ -1.12
CX3CR1-201ENST00000358309 MAP3K19Q56UN5 1328 aa8.04□□□□□ -1.12
CX3CR1-201ENST00000358309 KIDINS220Q9ULH0 1771 aa8.04□□□□□ -1.12
CX3CR1-201ENST00000358309 C8orf58Q8NAV2 365 aa8.04□□□□□ -1.12
CX3CR1-201ENST00000358309 POLR1AO95602 1720 aaPredicted RBP8.03□□□□□ -1.12
CX3CR1-201ENST00000358309 E9PCH4 1651 aa8.03□□□□□ -1.12
CX3CR1-201ENST00000358309 EVA1CP58658 441 aa8.03□□□□□ -1.12
CX3CR1-201ENST00000358309 LNPKQ9C0E8 428 aa8.03□□□□□ -1.12
CX3CR1-201ENST00000358309 TTC21BQ7Z4L5 1316 aa8.03□□□□□ -1.12
CX3CR1-201ENST00000358309 INO80Q9ULG1 1556 aaPredicted RBP8.03□□□□□ -1.12
CX3CR1-201ENST00000358309 DEPDC5O75140 1603 aa8.03□□□□□ -1.12
CX3CR1-201ENST00000358309 IQGAP3Q86VI3 1631 aa8.03□□□□□ -1.12
CX3CR1-201ENST00000358309 EP400Q96L91 3159 aa8.03□□□□□ -1.12
CX3CR1-201ENST00000358309 ABCC3O15438 1527 aa8.03□□□□□ -1.12
CX3CR1-201ENST00000358309 NOL8Q76FK4 1167 aaKnown RBP8.03□□□□□ -1.12
CX3CR1-201ENST00000358309 LGR6Q9HBX8 967 aa8.03□□□□□ -1.12
CX3CR1-201ENST00000358309 ABCA6Q8N139 1617 aa8.03□□□□□ -1.12
CX3CR1-201ENST00000358309 IGHDP01880 384 aa8.02□□□□□ -1.13
CX3CR1-201ENST00000358309 KRT28Q7Z3Y7 464 aa8.02□□□□□ -1.13
CX3CR1-201ENST00000358309 TSPYL4Q9UJ04 414 aa8.02□□□□□ -1.13
CX3CR1-201ENST00000358309 ERVK-7P63135 1459 aa8.02□□□□□ -1.13
CX3CR1-201ENST00000358309 PCNTO95613 3336 aa8.02□□□□□ -1.13
CX3CR1-201ENST00000358309 BRD4O60885 1362 aaPredicted RBP8.02□□□□□ -1.13
CX3CR1-201ENST00000358309 TMEM2Q9UHN6 1383 aa8.02□□□□□ -1.13
CX3CR1-201ENST00000358309 CFAP74Q9C0B2 1584 aa8.02□□□□□ -1.13
CX3CR1-201ENST00000358309 AEBP2Q6ZN18 517 aaPredicted RBP8.02□□□□□ -1.13
CX3CR1-201ENST00000358309 PPP6R1Q9UPN7 881 aa8.02□□□□□ -1.13
CX3CR1-201ENST00000358309 EYA1Q99502 592 aa8.02□□□□□ -1.13
CX3CR1-201ENST00000358309 AXIN2Q9Y2T1 843 aa8.02□□□□□ -1.13
CX3CR1-201ENST00000358309 SLFN5Q08AF3 891 aa8.01□□□□□ -1.13
CX3CR1-201ENST00000358309 PRDM11Q9NQV5 511 aa8.01□□□□□ -1.13
CX3CR1-201ENST00000358309 FRMPD1Q5SYB0 1578 aa8.01□□□□□ -1.13
CX3CR1-201ENST00000358309 PARD3Q8TEW0 1356 aa8.01□□□□□ -1.13
CX3CR1-201ENST00000358309 MAP4K4O95819 1239 aaPredicted RBP8.01□□□□□ -1.13
CX3CR1-201ENST00000358309 MTHFSDQ2M296 383 aaKnown RBP8.01□□□□□ -1.13
CX3CR1-201ENST00000358309 ACSBG1Q96GR2 724 aa8.01□□□□□ -1.13
CX3CR1-201ENST00000358309 CHMP3Q9Y3E7 222 aa8.01□□□□□ -1.13
CX3CR1-201ENST00000358309 PPRC1Q5VV67 1664 aaKnown RBP8.01□□□□□ -1.13
CX3CR1-201ENST00000358309 PTPRTO14522 1441 aa8.01□□□□□ -1.13
CX3CR1-201ENST00000358309 SMARCA5O60264 1052 aaPredicted RBP8□□□□□ -1.13
CX3CR1-201ENST00000358309 TOM1L2Q6ZVM7 507 aa8□□□□□ -1.13
CX3CR1-201ENST00000358309 EIF2AK4Q9P2K8 1649 aaKnown RBP8□□□□□ -1.13
CX3CR1-201ENST00000358309 RPGRIP1LQ68CZ1 1315 aa8□□□□□ -1.13
CX3CR1-201ENST00000358309 MLH3Q9UHC1 1453 aa8□□□□□ -1.13
CX3CR1-201ENST00000358309 SLC4A2P04920 1241 aa8□□□□□ -1.13
CX3CR1-201ENST00000358309 NBPF6Q5VWK0 638 aa8□□□□□ -1.13
CX3CR1-201ENST00000358309 NBPF4Q96M43 638 aa8□□□□□ -1.13
CX3CR1-201ENST00000358309 G2E3Q7L622 706 aa8□□□□□ -1.13
CX3CR1-201ENST00000358309 TMEM57Q8N5G2 664 aa8□□□□□ -1.13
CX3CR1-201ENST00000358309 FANCIQ9NVI1 1328 aa8□□□□□ -1.13
CX3CR1-201ENST00000358309 GPRASP1Q5JY77 1395 aa7.99□□□□□ -1.13
CX3CR1-201ENST00000358309 KDM5CP41229 1560 aa7.99□□□□□ -1.13
CX3CR1-201ENST00000358309 FKBP5Q13451 457 aaPredicted RBP7.99□□□□□ -1.13
CX3CR1-201ENST00000358309 ZNF530Q6P9A1 599 aaPredicted RBP7.99□□□□□ -1.13
CX3CR1-201ENST00000358309 MBIPQ9NS73 344 aa7.99□□□□□ -1.13
CX3CR1-201ENST00000358309 KDM4FA0A1W2PPD8 638 aa7.99□□□□□ -1.13
CX3CR1-201ENST00000358309 CCDC24Q8N4L8 307 aa7.99□□□□□ -1.13
CX3CR1-201ENST00000358309 SLKQ9H2G2 1235 aaPredicted RBP7.99□□□□□ -1.13
CX3CR1-201ENST00000358309 HECW2Q9P2P5 1572 aa7.99□□□□□ -1.13
CX3CR1-201ENST00000358309 TRIM35Q9UPQ4 493 aa7.99□□□□□ -1.13
CX3CR1-201ENST00000358309 TWISTNBQ3B726 338 aaPredicted RBP7.98□□□□□ -1.13
CX3CR1-201ENST00000358309 PCDHB15Q9Y5E8 787 aa7.98□□□□□ -1.13
CX3CR1-201ENST00000358309 NEO1Q92859 1461 aa7.98□□□□□ -1.13
CX3CR1-201ENST00000358309 ANKRD45Q5TZF3 282 aa7.98□□□□□ -1.13
CX3CR1-201ENST00000358309 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.98□□□□□ -1.13
CX3CR1-201ENST00000358309 CHMP4CQ96CF2 233 aa7.98□□□□□ -1.13
CX3CR1-201ENST00000358309 DIP2CQ9Y2E4 1556 aa7.98□□□□□ -1.13
CX3CR1-201ENST00000358309 E9PSI1 815 aa7.98□□□□□ -1.13
CX3CR1-201ENST00000358309 GCP02774 474 aa7.98□□□□□ -1.13
CX3CR1-201ENST00000358309 MFAP1P55081 439 aaKnown RBP7.98□□□□□ -1.13
CX3CR1-201ENST00000358309 TEFQ10587 303 aa7.98□□□□□ -1.13
CX3CR1-201ENST00000358309 FOXD4L6Q3SYB3 417 aaPredicted RBP7.98□□□□□ -1.13
CX3CR1-201ENST00000358309 FOXD4L3Q6VB84 417 aaPredicted RBP7.98□□□□□ -1.13
CX3CR1-201ENST00000358309 PIK3C2GO75747 1445 aa7.97□□□□□ -1.13
CX3CR1-201ENST00000358309 RBM42Q9BTD8 480 aaKnown RBP7.97□□□□□ -1.13
CX3CR1-201ENST00000358309 MAP3K4Q9Y6R4 1608 aa7.97□□□□□ -1.13
CX3CR1-201ENST00000358309 RARSP54136 660 aaKnown RBP7.97□□□□□ -1.13
CX3CR1-201ENST00000358309 FOXD4L5Q5VV16 416 aaPredicted RBP7.97□□□□□ -1.13
CX3CR1-201ENST00000358309 C16orf71Q8IYS4 520 aaPredicted RBP7.97□□□□□ -1.13
CX3CR1-201ENST00000358309 FOXD4L4Q8WXT5 416 aaPredicted RBP7.97□□□□□ -1.13
CX3CR1-201ENST00000358309 SIL1Q9H173 461 aa7.97□□□□□ -1.13
CX3CR1-201ENST00000358309 A2ML1A8K2U0 1454 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms