RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 AK7Q96M32 723 aa7.95□□□□□ -1.14
TRIM38-201ENST00000357085 K7ELQ4 463 aaPredicted RBP7.95□□□□□ -1.14
TRIM38-201ENST00000357085 BCL11BQ9C0K0 894 aaPredicted RBP7.95□□□□□ -1.14
TRIM38-201ENST00000357085 ABCC5O15440 1437 aa7.95□□□□□ -1.14
TRIM38-201ENST00000357085 SMC4Q9NTJ3 1288 aa7.94□□□□□ -1.14
TRIM38-201ENST00000357085 TIGD1Q96MW7 591 aa7.94□□□□□ -1.14
TRIM38-201ENST00000357085 NOL7Q9UMY1 257 aaKnown RBP7.94□□□□□ -1.14
TRIM38-201ENST00000357085 IL16Q14005 1332 aa7.94□□□□□ -1.14
TRIM38-201ENST00000357085 TNPO1Q92973 898 aaKnown RBP7.94□□□□□ -1.14
TRIM38-201ENST00000357085 TERF2IPQ9NYB0 399 aa7.94□□□□□ -1.14
TRIM38-201ENST00000357085 API5Q9BZZ5 524 aaKnown RBP7.94□□□□□ -1.14
TRIM38-201ENST00000357085 SMC5Q8IY18 1101 aa7.94□□□□□ -1.14
TRIM38-201ENST00000357085 UNC13BO14795 1591 aa7.93□□□□□ -1.14
TRIM38-201ENST00000357085 NEUROD2Q15784 382 aa7.93□□□□□ -1.14
TRIM38-201ENST00000357085 ZKSCAN5Q9Y2L8 839 aa7.93□□□□□ -1.14
TRIM38-201ENST00000357085 BMP2KLQ5H9B9 411 aa7.93□□□□□ -1.14
TRIM38-201ENST00000357085 SKAP1Q86WV1 359 aa7.93□□□□□ -1.14
TRIM38-201ENST00000357085 CACNA1FO60840 1977 aa7.93□□□□□ -1.14
TRIM38-201ENST00000357085 USP25Q9UHP3 1055 aa7.93□□□□□ -1.14
TRIM38-201ENST00000357085 PANK3Q9H999 370 aa7.92□□□□□ -1.14
TRIM38-201ENST00000357085 HDAC1Q13547 482 aaPredicted RBP7.92□□□□□ -1.14
TRIM38-201ENST00000357085 CCDC27Q2M243 656 aa7.92□□□□□ -1.14
TRIM38-201ENST00000357085 AXDND1Q5T1B0 1012 aaPredicted RBP7.92□□□□□ -1.14
TRIM38-201ENST00000357085 KDM5BQ9UGL1 1544 aa7.92□□□□□ -1.14
TRIM38-201ENST00000357085 PAXBP1Q9Y5B6 917 aa7.92□□□□□ -1.14
TRIM38-201ENST00000357085 IQGAP3Q86VI3 1631 aa7.92□□□□□ -1.14
TRIM38-201ENST00000357085 WDR33Q9C0J8 1336 aaKnown RBP7.92□□□□□ -1.14
TRIM38-201ENST00000357085 MVPQ14764 893 aaKnown RBP7.92□□□□□ -1.14
TRIM38-201ENST00000357085 C20orf194Q5TEA3 1177 aa7.92□□□□□ -1.14
TRIM38-201ENST00000357085 ERCC4Q92889 916 aaPredicted RBP7.92□□□□□ -1.14
TRIM38-201ENST00000357085 KCNJ4P48050 445 aa7.91□□□□□ -1.14
TRIM38-201ENST00000357085 PANK1Q8TE04 598 aa7.91□□□□□ -1.14
TRIM38-201ENST00000357085 SLFN5Q08AF3 891 aa7.91□□□□□ -1.14
TRIM38-201ENST00000357085 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.91□□□□□ -1.14
TRIM38-201ENST00000357085 ALDH1L2Q3SY69 923 aa7.91□□□□□ -1.14
TRIM38-201ENST00000357085 PDZRN3Q9UPQ7 1066 aa7.91□□□□□ -1.14
TRIM38-201ENST00000357085 MRC2Q9UBG0 1479 aa7.91□□□□□ -1.14
TRIM38-201ENST00000357085 CCDC192P0DO97 292 aa7.91□□□□□ -1.14
TRIM38-201ENST00000357085 CCDC70Q6NSX1 233 aa7.91□□□□□ -1.14
TRIM38-201ENST00000357085 TPRNQ4KMQ1 711 aa7.91□□□□□ -1.14
TRIM38-201ENST00000357085 V9GYY5 206 aaPredicted RBP7.91□□□□□ -1.14
TRIM38-201ENST00000357085 ZNF500O60304 480 aaPredicted RBP7.91□□□□□ -1.14
TRIM38-201ENST00000357085 CCDC146Q8IYE0 955 aa7.91□□□□□ -1.14
TRIM38-201ENST00000357085 SYCP1Q15431 976 aa7.9□□□□□ -1.14
TRIM38-201ENST00000357085 IFT57Q9NWB7 429 aa7.9□□□□□ -1.14
TRIM38-201ENST00000357085 POLR3AO14802 1390 aaPredicted RBP7.9□□□□□ -1.14
TRIM38-201ENST00000357085 PZPP20742 1482 aa7.9□□□□□ -1.14
TRIM38-201ENST00000357085 ARHGAP5Q13017 1502 aa7.9□□□□□ -1.14
TRIM38-201ENST00000357085 PAXIP1Q6ZW49 1069 aaPredicted RBP7.9□□□□□ -1.15
TRIM38-201ENST00000357085 CHMP7Q8WUX9 453 aaPredicted RBP7.9□□□□□ -1.15
TRIM38-201ENST00000357085 CFAP65Q6ZU64 1925 aaKnown RBP7.9□□□□□ -1.15
TRIM38-201ENST00000357085 CDC42BPAQ5VT25 1732 aa7.9□□□□□ -1.15
TRIM38-201ENST00000357085 LRRIQ1Q96JM4 1722 aa7.9□□□□□ -1.15
TRIM38-201ENST00000357085 POTEB2H3BUK9 544 aa7.89□□□□□ -1.15
TRIM38-201ENST00000357085 PPP2R1AP30153 589 aa7.89□□□□□ -1.15
TRIM38-201ENST00000357085 AEBP1Q8IUX7 1158 aa7.89□□□□□ -1.15
TRIM38-201ENST00000357085 RUFY2Q8WXA3 655 aa7.89□□□□□ -1.15
TRIM38-201ENST00000357085 RNF17Q9BXT8 1623 aaKnown RBP7.89□□□□□ -1.15
TRIM38-201ENST00000357085 NBPF8Q3BBV2 869 aa7.89□□□□□ -1.15
TRIM38-201ENST00000357085 CCDC112Q8NEF3 446 aa7.89□□□□□ -1.15
TRIM38-201ENST00000357085 CEP152O94986 1710 aa7.89□□□□□ -1.15
TRIM38-201ENST00000357085 PLPPR3Q6T4P5 718 aa7.89□□□□□ -1.15
TRIM38-201ENST00000357085 RNF214Q8ND24 703 aa7.89□□□□□ -1.15
TRIM38-201ENST00000357085 EVC2Q86UK5 1308 aa7.89□□□□□ -1.15
TRIM38-201ENST00000357085 NEURL4Q96JN8 1562 aa7.89□□□□□ -1.15
TRIM38-201ENST00000357085 MAPK8IP2Q13387 824 aaPredicted RBP7.89□□□□□ -1.15
TRIM38-201ENST00000357085 MYRIPQ8NFW9 859 aa7.88□□□□□ -1.15
TRIM38-201ENST00000357085 SRCIN1Q9C0H9 1055 aa7.88□□□□□ -1.15
TRIM38-201ENST00000357085 EPB41L2O43491 1005 aaKnown RBP7.88□□□□□ -1.15
TRIM38-201ENST00000357085 ADAMTS8Q9UP79 889 aa7.88□□□□□ -1.15
TRIM38-201ENST00000357085 CFAP74Q9C0B2 1584 aa7.88□□□□□ -1.15
TRIM38-201ENST00000357085 GOLGA6L19H0YKK7 550 aa7.88□□□□□ -1.15
TRIM38-201ENST00000357085 RAB3GAP1Q15042 981 aa7.88□□□□□ -1.15
TRIM38-201ENST00000357085 HSP90B2PQ58FF3 399 aa7.88□□□□□ -1.15
TRIM38-201ENST00000357085 TXLNBQ8N3L3 684 aa7.88□□□□□ -1.15
TRIM38-201ENST00000357085 PRPF40AO75400 957 aaKnown RBP7.88□□□□□ -1.15
TRIM38-201ENST00000357085 WWC1Q8IX03 1113 aa7.88□□□□□ -1.15
TRIM38-201ENST00000357085 USP32Q8NFA0 1604 aa7.88□□□□□ -1.15
TRIM38-201ENST00000357085 ASXL2Q76L83 1435 aa7.88□□□□□ -1.15
TRIM38-201ENST00000357085 ERICH4A6NGS2 130 aa7.88□□□□□ -1.15
TRIM38-201ENST00000357085 ZSCAN23Q3MJ62 389 aa7.88□□□□□ -1.15
TRIM38-201ENST00000357085 OGFRQ9NZT2 677 aa7.88□□□□□ -1.15
TRIM38-201ENST00000357085 RAD54L2Q9Y4B4 1467 aa7.88□□□□□ -1.15
TRIM38-201ENST00000357085 ERLIN1O75477 346 aa7.87□□□□□ -1.15
TRIM38-201ENST00000357085 SBNO2Q9Y2G9 1366 aa7.87□□□□□ -1.15
TRIM38-201ENST00000357085 PUS7Q96PZ0 661 aaKnown RBP7.87□□□□□ -1.15
TRIM38-201ENST00000357085 SRRTQ9BXP5 876 aaKnown RBP7.87□□□□□ -1.15
TRIM38-201ENST00000357085 SYCE3A1L190 88 aa7.87□□□□□ -1.15
TRIM38-201ENST00000357085 EIF3JO75822 258 aaKnown RBP7.87□□□□□ -1.15
TRIM38-201ENST00000357085 HDGFL2Q7Z4V5 671 aaPredicted RBP7.87□□□□□ -1.15
TRIM38-201ENST00000357085 KRT222Q8N1A0 295 aa7.87□□□□□ -1.15
TRIM38-201ENST00000357085 ZNF592Q92610 1267 aa7.87□□□□□ -1.15
TRIM38-201ENST00000357085 PPP1R9BQ96SB3 815 aa7.87□□□□□ -1.15
TRIM38-201ENST00000357085 HOOK1Q9UJC3 728 aaKnown RBP7.87□□□□□ -1.15
TRIM38-201ENST00000357085 DDX11Q96FC9 970 aa7.87□□□□□ -1.15
TRIM38-201ENST00000357085 CCDC171Q6TFL3 1326 aa7.87□□□□□ -1.15
TRIM38-201ENST00000357085 TUBBP07437 444 aa7.87□□□□□ -1.15
TRIM38-201ENST00000357085 GNAI1P63096 354 aa7.87□□□□□ -1.15
TRIM38-201ENST00000357085 ZFYVE9O95405 1425 aa7.87□□□□□ -1.15
TRIM38-201ENST00000357085 ZNF445P59923 1031 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms