RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 WAPLQ7Z5K2 1190 aa28.1■■■□□ 2.09
LIMS2-202ENST00000355119 PANK1Q8TE04 598 aa28.1■■■□□ 2.09
LIMS2-202ENST00000355119 CLUAP1Q96AJ1 413 aa28.1■■■□□ 2.09
LIMS2-202ENST00000355119 MAPK8IP3Q9UPT6 1336 aa28.1■■■□□ 2.09
LIMS2-202ENST00000355119 ZMYM3Q14202 1370 aa28.1■■■□□ 2.09
LIMS2-202ENST00000355119 DIAPH1O60610 1272 aaKnown RBP28.09■■■□□ 2.09
LIMS2-202ENST00000355119 FRAT1Q92837 279 aaPredicted RBP28.09■■■□□ 2.09
LIMS2-202ENST00000355119 TMPOP42166 694 aaKnown RBP28.08■■■□□ 2.09
LIMS2-202ENST00000355119 COG6Q9Y2V7 657 aa28.08■■■□□ 2.09
LIMS2-202ENST00000355119 HDGFP51858 240 aaKnown RBP28.08■■■□□ 2.08
LIMS2-202ENST00000355119 FAM161AQ3B820 660 aa28.08■■■□□ 2.08
LIMS2-202ENST00000355119 CDC42BPGQ6DT37 1551 aa28.07■■■□□ 2.08
LIMS2-202ENST00000355119 KNDC1Q76NI1 1749 aa28.07■■■□□ 2.08
LIMS2-202ENST00000355119 IL16Q14005 1332 aa28.05■■■□□ 2.08
LIMS2-202ENST00000355119 SIRT1Q96EB6 747 aa28.05■■■□□ 2.08
LIMS2-202ENST00000355119 DDRGK1Q96HY6 314 aa28.04■■■□□ 2.08
LIMS2-202ENST00000355119 FAM135BQ49AJ0 1406 aa28.03■■■□□ 2.08
LIMS2-202ENST00000355119 WASLO00401 505 aaPredicted RBP28.02■■■□□ 2.08
LIMS2-202ENST00000355119 IGHDP01880 384 aa28.02■■■□□ 2.08
LIMS2-202ENST00000355119 TRIM35Q9UPQ4 493 aa28.02■■■□□ 2.08
LIMS2-202ENST00000355119 METP08581 1390 aa28.02■■■□□ 2.08
LIMS2-202ENST00000355119 TNRQ92752 1358 aa28.02■■■□□ 2.08
LIMS2-202ENST00000355119 TECPR2O15040 1411 aa28.02■■■□□ 2.08
LIMS2-202ENST00000355119 EDC4Q6P2E9 1401 aaKnown RBP28.02■■■□□ 2.08
LIMS2-202ENST00000355119 CPSF1Q10570 1443 aaKnown RBP28.01■■■□□ 2.07
LIMS2-202ENST00000355119 RGS3P49796 1198 aa27.99■■■□□ 2.07
LIMS2-202ENST00000355119 C8orf34Q49A92 452 aa27.99■■■□□ 2.07
LIMS2-202ENST00000355119 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.99■■■□□ 2.07
LIMS2-202ENST00000355119 PMFBP1Q8TBY8 1022 aa27.99■■■□□ 2.07
LIMS2-202ENST00000355119 PPIP5K1Q6PFW1 1433 aa27.99■■■□□ 2.07
LIMS2-202ENST00000355119 FCHSD2O94868 740 aa27.99■■■□□ 2.07
LIMS2-202ENST00000355119 CPS1P31327 1500 aa27.98■■■□□ 2.07
LIMS2-202ENST00000355119 BCL2L13Q9BXK5 485 aa27.97■■■□□ 2.07
LIMS2-202ENST00000355119 POLKQ9UBT6 870 aa27.97■■■□□ 2.07
LIMS2-202ENST00000355119 RLBP1P12271 317 aa27.96■■■□□ 2.07
LIMS2-202ENST00000355119 RIPK4P57078 832 aa27.96■■■□□ 2.07
LIMS2-202ENST00000355119 ZKSCAN2Q63HK3 967 aa27.96■■■□□ 2.07
LIMS2-202ENST00000355119 TSR2Q969E8 191 aaKnown RBP27.95■■■□□ 2.06
LIMS2-202ENST00000355119 EXOSC9Q06265 439 aaKnown RBP27.94■■■□□ 2.06
LIMS2-202ENST00000355119 TXNDC2Q86VQ3 553 aa27.94■■■□□ 2.06
LIMS2-202ENST00000355119 LRRC7Q96NW7 1537 aa27.94■■■□□ 2.06
LIMS2-202ENST00000355119 UBR1Q8IWV7 1749 aa27.94■■■□□ 2.06
LIMS2-202ENST00000355119 TMEM2Q9UHN6 1383 aa27.93■■■□□ 2.06
LIMS2-202ENST00000355119 TNNQ9UQP3 1299 aa27.93■■■□□ 2.06
LIMS2-202ENST00000355119 NEFMP07197 916 aa27.92■■■□□ 2.06
LIMS2-202ENST00000355119 NUDT16Q96DE0 195 aaKnown RBP27.92■■■□□ 2.06
LIMS2-202ENST00000355119 MON2Q7Z3U7 1717 aa27.92■■■□□ 2.06
LIMS2-202ENST00000355119 MVPQ14764 893 aaKnown RBP27.91■■■□□ 2.06
LIMS2-202ENST00000355119 RSPH6AQ9H0K4 717 aa27.91■■■□□ 2.06
LIMS2-202ENST00000355119 AATKQ6ZMQ8 1374 aa27.91■■■□□ 2.06
LIMS2-202ENST00000355119 DZIP1LQ8IYY4 767 aaKnown RBP27.9■■■□□ 2.06
LIMS2-202ENST00000355119 SMC4Q9NTJ3 1288 aa27.9■■■□□ 2.06
LIMS2-202ENST00000355119 CCDC61Q9Y6R9 512 aa27.9■■■□□ 2.06
LIMS2-202ENST00000355119 CDK12Q9NYV4 1490 aaPredicted RBP27.9■■■□□ 2.06
LIMS2-202ENST00000355119 MAP2P11137 1827 aaKnown RBP27.9■■■□□ 2.06
LIMS2-202ENST00000355119 NBR1Q14596 966 aa27.89■■■□□ 2.06
LIMS2-202ENST00000355119 PCDHB15Q9Y5E8 787 aa27.89■■■□□ 2.05
LIMS2-202ENST00000355119 AKAP12Q02952 1782 aa27.88■■■□□ 2.05
LIMS2-202ENST00000355119 PPM1GO15355 546 aaPredicted RBP27.88■■■□□ 2.05
LIMS2-202ENST00000355119 FTSJ3Q8IY81 847 aaKnown RBP27.88■■■□□ 2.05
LIMS2-202ENST00000355119 RWDD1Q9H446 243 aaPredicted RBP27.88■■■□□ 2.05
LIMS2-202ENST00000355119 VIRMAQ69YN4 1812 aaKnown RBP27.88■■■□□ 2.05
LIMS2-202ENST00000355119 PRKAR2BP31323 418 aa27.87■■■□□ 2.05
LIMS2-202ENST00000355119 ITSN1Q15811 1721 aa27.87■■■□□ 2.05
LIMS2-202ENST00000355119 NME9Q86XW9 330 aa27.86■■■□□ 2.05
LIMS2-202ENST00000355119 DNAJC5Q9H3Z4 198 aa27.86■■■□□ 2.05
LIMS2-202ENST00000355119 SSH1Q8WYL5 1049 aa27.85■■■□□ 2.05
LIMS2-202ENST00000355119 ZNF692Q9BU19 519 aaPredicted RBP27.85■■■□□ 2.05
LIMS2-202ENST00000355119 COG3Q96JB2 828 aa27.84■■■□□ 2.05
LIMS2-202ENST00000355119 NFE2L2Q16236 605 aa27.84■■■□□ 2.05
LIMS2-202ENST00000355119 ADAMTS13Q76LX8 1427 aa27.84■■■□□ 2.05
LIMS2-202ENST00000355119 C3P01024 1663 aa27.83■■■□□ 2.05
LIMS2-202ENST00000355119 FBLN1P23142 703 aa27.82■■■□□ 2.04
LIMS2-202ENST00000355119 IL13P35225 146 aa27.82■■■□□ 2.04
LIMS2-202ENST00000355119 CALD1Q05682 793 aaKnown RBP27.82■■■□□ 2.04
LIMS2-202ENST00000355119 PLEKHG1Q9ULL1 1385 aa27.82■■■□□ 2.04
LIMS2-202ENST00000355119 EMILIN1Q9Y6C2 1016 aa27.82■■■□□ 2.04
LIMS2-202ENST00000355119 RTL5Q5HYW3 569 aaPredicted RBP27.81■■■□□ 2.04
LIMS2-202ENST00000355119 ATF7IPQ6VMQ6 1270 aa27.81■■■□□ 2.04
LIMS2-202ENST00000355119 ALDH1L2Q3SY69 923 aa27.8■■■□□ 2.04
LIMS2-202ENST00000355119 KIF16BQ96L93 1317 aa27.8■■■□□ 2.04
LIMS2-202ENST00000355119 ROBO2Q9HCK4 1378 aa27.8■■■□□ 2.04
LIMS2-202ENST00000355119 TRIM27P14373 513 aa27.8■■■□□ 2.04
LIMS2-202ENST00000355119 IPO8O15397 1037 aaKnown RBP27.79■■■□□ 2.04
LIMS2-202ENST00000355119 ZNF428Q96B54 188 aa27.79■■■□□ 2.04
LIMS2-202ENST00000355119 DDX19BQ9UMR2 479 aa27.79■■■□□ 2.04
LIMS2-202ENST00000355119 ZRANB1Q9UGI0 708 aa27.79■■■□□ 2.04
LIMS2-202ENST00000355119 PRR36Q9H6K5 1346 aa27.78■■■□□ 2.04
LIMS2-202ENST00000355119 NOB1Q9ULX3 412 aaKnown RBP27.77■■■□□ 2.04
LIMS2-202ENST00000355119 NCKAP5LQ9HCH0 1330 aa27.77■■■□□ 2.04
LIMS2-202ENST00000355119 HMOX1P09601 288 aa27.77■■■□□ 2.04
LIMS2-202ENST00000355119 PDZRN3Q9UPQ7 1066 aa27.77■■■□□ 2.04
LIMS2-202ENST00000355119 DAXXQ9UER7 740 aaPredicted RBP27.76■■■□□ 2.03
LIMS2-202ENST00000355119 PHACTR3Q96KR7 559 aa27.75■■■□□ 2.03
LIMS2-202ENST00000355119 TOPAZ1Q8N9V7 1692 aa27.75■■■□□ 2.03
LIMS2-202ENST00000355119 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.74■■■□□ 2.03
LIMS2-202ENST00000355119 BRPF1P55201 1214 aaPredicted RBP27.73■■■□□ 2.03
LIMS2-202ENST00000355119 LMOD3Q0VAK6 560 aa27.73■■■□□ 2.03
LIMS2-202ENST00000355119 ITPRIPQ8IWB1 547 aa27.73■■■□□ 2.03
LIMS2-202ENST00000355119 HDAC1Q13547 482 aaPredicted RBP27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms